Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04721

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
109,252	+		MPMX19_04720	0.33	-1.2
109,252	+		MPMX19_04720	0.33	-1.9
109,253	-		MPMX19_04720	0.33	-1.2
109,253	-		MPMX19_04720	0.33	-2.3
109,253	-		MPMX19_04720	0.33	+0.3
109,253	-		MPMX19_04720	0.33	-1.2
109,253	-		MPMX19_04720	0.33	-0.5
109,273	+		MPMX19_04720	0.34	-1.2
109,273	+		MPMX19_04720	0.34	-1.5
109,273	+		MPMX19_04720	0.34	-1.5
109,274	-		MPMX19_04720	0.34	-1.7
109,274	-		MPMX19_04720	0.34	-0.5
109,364	-		MPMX19_04720	0.42	-0.5
109,364	-		MPMX19_04720	0.42	+0.1
109,423	+		MPMX19_04720	0.47	+0.2
109,423	+		MPMX19_04720	0.47	+0.4
109,423	+		MPMX19_04720	0.47	-1.2
109,423	+		MPMX19_04720	0.47	-0.8
109,423	+		MPMX19_04720	0.47	+0.1
109,423	+		MPMX19_04720	0.47	+0.1
109,423	+		MPMX19_04720	0.47	-0.6
109,423	+		MPMX19_04720	0.47	-1.5
109,424	-		MPMX19_04720	0.47	-1.7
109,424	-		MPMX19_04720	0.47	+1.1
109,424	-		MPMX19_04720	0.47	-0.9
109,424	-		MPMX19_04720	0.47	-1.1
109,424	-		MPMX19_04720	0.47	+0.4
109,424	-		MPMX19_04720	0.47	-1.5
109,424	-		MPMX19_04720	0.47	+0.1
109,424	-		MPMX19_04720	0.47	+0.1
109,424	-		MPMX19_04720	0.47	+1.8
109,424	-		MPMX19_04720	0.47	-0.3
109,424	-		MPMX19_04720	0.47	+0.1
109,424	-		MPMX19_04720	0.47	-0.2
109,424	-		MPMX19_04720	0.47	+0.1
109,424	-		MPMX19_04720	0.47	-0.2
109,424	-		MPMX19_04720	0.47	-2.5
109,424	-		MPMX19_04720	0.47	-0.7
109,424	-		MPMX19_04720	0.47	-0.5
109,756	+		MPMX19_04720	0.75	-1.2
109,756	+		MPMX19_04720	0.75	-0.5
109,756	+		MPMX19_04720	0.75	-1.2
109,756	+		MPMX19_04720	0.75	-1.1
109,756	+		MPMX19_04720	0.75	-1.1
109,756	+		MPMX19_04720	0.75	-1.2
109,756	+		MPMX19_04720	0.75	-0.9
109,756	+		MPMX19_04720	0.75	-1.1
109,756	+		MPMX19_04720	0.75	-2.0
109,757	-		MPMX19_04720	0.75	-0.1
109,757	-		MPMX19_04720	0.75	-0.2
109,757	-		MPMX19_04720	0.75	-0.7
109,757	-		MPMX19_04720	0.75	+0.1
109,757	-		MPMX19_04720	0.75	-0.1
109,757	-		MPMX19_04720	0.75	-0.9
109,757	-		MPMX19_04720	0.75	-0.1
109,757	-		MPMX19_04720	0.75	-0.9
109,757	-		MPMX19_04720	0.75	+0.1
109,757	-		MPMX19_04720	0.75	+0.6
109,757	-		MPMX19_04720	0.75	-1.0
109,757	-		MPMX19_04720	0.75	+0.1
109,757	-		MPMX19_04720	0.75	-0.0
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	-0.9
109,757	-		MPMX19_04720	0.75	+1.1
109,757	-		MPMX19_04720	0.75	-2.6
109,757	-		MPMX19_04720	0.75	+0.4
109,757	-		MPMX19_04720	0.75	-1.0
109,757	-		MPMX19_04720	0.75	-0.6
109,759	+		MPMX19_04720	0.75	+0.1
109,760	-		MPMX19_04720	0.75	-1.2
109,781	-		MPMX19_04720	0.77	-1.3
110,068	+				-0.5
110,068	+				-0.5
110,068	+				+0.1
110,068	+				+0.1
110,068	+				-0.2
110,069	-				+0.8
110,069	-				-0.5
110,094	+				-0.6
110,095	-				-0.9
110,096	+				-2.1
110,096	+				-1.3
110,096	+				-1.2
110,096	+				-0.2
110,097	-				-0.7
110,097	-				+0.5
110,349	+				-0.2
110,349	+				-1.2
110,358	+				-0.2
110,359	-				+0.9
110,682	+		MPMX19_04721	0.22	-0.5
110,683	-		MPMX19_04721	0.22	-0.7
110,802	+		MPMX19_04721	0.28	-1.9
110,803	-		MPMX19_04721	0.28	-0.7
110,880	+		MPMX19_04721	0.32	-0.1
110,880	+		MPMX19_04721	0.32	+0.9
110,880	+		MPMX19_04721	0.32	+1.5
110,880	+		MPMX19_04721	0.32	+0.1
110,880	+		MPMX19_04721	0.32	-1.2
110,880	+		MPMX19_04721	0.32	-0.7
110,880	+		MPMX19_04721	0.32	-2.1
110,880	+		MPMX19_04721	0.32	-0.8
110,880	+		MPMX19_04721	0.32	-0.5
110,880	+		MPMX19_04721	0.32	-0.0
110,881	-		MPMX19_04721	0.32	-0.8
110,881	-		MPMX19_04721	0.32	-0.3
110,881	-		MPMX19_04721	0.32	+0.3
110,881	-		MPMX19_04721	0.32	+1.8
110,881	-		MPMX19_04721	0.32	-0.5
110,881	-		MPMX19_04721	0.32	-0.5
110,881	-		MPMX19_04721	0.32	-1.1
110,881	-		MPMX19_04721	0.32	+0.8
110,881	-		MPMX19_04721	0.32	+0.1
110,881	-		MPMX19_04721	0.32	+0.3
110,881	-		MPMX19_04721	0.32	-0.1
110,881	-		MPMX19_04721	0.32	-0.6
110,881	-		MPMX19_04721	0.32	+0.5
110,964	+		MPMX19_04721	0.36	-1.5
110,964	+		MPMX19_04721	0.36	-1.2
110,964	+		MPMX19_04721	0.36	-1.3
110,964	+		MPMX19_04721	0.36	+0.5
110,964	+		MPMX19_04721	0.36	+1.8
110,964	+		MPMX19_04721	0.36	-2.1
110,965	-		MPMX19_04721	0.36	-0.5
110,965	-		MPMX19_04721	0.36	+0.0
110,965	-		MPMX19_04721	0.36	-0.1
111,285	+		MPMX19_04721	0.52	+2.4
111,286	-		MPMX19_04721	0.52	-0.0
111,286	-		MPMX19_04721	0.52	-0.1
111,286	-		MPMX19_04721	0.52	+0.1
111,303	+		MPMX19_04721	0.53	+0.8
111,303	+		MPMX19_04721	0.53	+1.7
111,303	+		MPMX19_04721	0.53	-0.8
111,303	+		MPMX19_04721	0.53	-0.9
111,304	-		MPMX19_04721	0.53	-0.1
111,304	-		MPMX19_04721	0.53	-2.7
111,304	-		MPMX19_04721	0.53	-0.5
111,304	-		MPMX19_04721	0.53	-1.3
111,304	-		MPMX19_04721	0.53	-0.6
111,304	-		MPMX19_04721	0.53	-0.3
111,304	-		MPMX19_04721	0.53	-1.0
111,304	-		MPMX19_04721	0.53	+0.6
111,771	+		MPMX19_04721	0.76	+0.8
111,771	+		MPMX19_04721	0.76	-1.0
111,771	+		MPMX19_04721	0.76	-0.2
111,771	+		MPMX19_04721	0.76	-0.0
111,771	+		MPMX19_04721	0.76	-1.2
111,771	+		MPMX19_04721	0.76	-0.9
111,771	+		MPMX19_04721	0.76	-0.1
111,771	+		MPMX19_04721	0.76	+0.1
111,771	+		MPMX19_04721	0.76	-2.7
111,771	+		MPMX19_04721	0.76	-1.7
111,772	-		MPMX19_04721	0.76	+0.4
111,772	-		MPMX19_04721	0.76	+0.1
111,772	-		MPMX19_04721	0.76	+0.1
111,772	-		MPMX19_04721	0.76	+0.7
111,772	-		MPMX19_04721	0.76	-2.3
111,772	-		MPMX19_04721	0.76	+1.1
111,772	-		MPMX19_04721	0.76	+0.8
111,772	-		MPMX19_04721	0.76	-0.1
111,772	-		MPMX19_04721	0.76	-0.2
111,915	+		MPMX19_04721	0.83	+0.8
111,915	+		MPMX19_04721	0.83	-1.1
111,915	+		MPMX19_04721	0.83	-1.2
111,915	+		MPMX19_04721	0.83	+1.1
111,915	+		MPMX19_04721	0.83	+0.1
111,916	-		MPMX19_04721	0.83	+0.5
111,916	-		MPMX19_04721	0.83	-1.2
111,916	-		MPMX19_04721	0.83	+0.8
111,916	-		MPMX19_04721	0.83	+0.1
111,916	-		MPMX19_04721	0.83	+0.8
111,916	-		MPMX19_04721	0.83	-1.6
111,963	+		MPMX19_04721	0.85	-1.7
112,005	+		MPMX19_04721	0.87	-0.7
112,005	+		MPMX19_04721	0.87	+1.1
112,005	+		MPMX19_04721	0.87	-0.2
112,005	+		MPMX19_04721	0.87	+0.8
112,005	+		MPMX19_04721	0.87	-1.7
112,006	-		MPMX19_04721	0.87	+0.1
112,006	-		MPMX19_04721	0.87	+0.1
112,006	-		MPMX19_04721	0.87	+0.2
112,006	-		MPMX19_04721	0.87	-0.8
112,006	-		MPMX19_04721	0.87	-0.5
112,080	+				-2.1
112,080	+				-0.5
112,081	-				+0.0
112,081	-				+0.1
112,183	-				-0.3
112,183	-				-0.8
112,239	+				-0.3
112,239	+				+0.1
112,239	+				-0.1
112,239	+				+0.3
112,239	+				-1.2
112,240	-				-0.5
112,240	-				+0.1
112,240	-				+0.7
112,240	-				-0.8
112,240	-				+0.3
112,278	+				-1.5
112,454	+				-0.1
112,454	+				+0.4
112,665	+		MPMX19_04722	0.19	-0.1
112,665	+		MPMX19_04722	0.19	+0.1
112,665	+		MPMX19_04722	0.19	+1.7
112,665	+		MPMX19_04722	0.19	-0.5
112,666	-		MPMX19_04722	0.19	-0.9
112,666	-		MPMX19_04722	0.19	-1.9
112,666	-		MPMX19_04722	0.19	-0.9
113,090	+		MPMX19_04722	0.41	-0.6
113,091	-		MPMX19_04722	0.41	-0.2
113,174	+		MPMX19_04722	0.45	-0.9
113,174	+		MPMX19_04722	0.45	+0.8
113,174	+		MPMX19_04722	0.45	+1.7
113,174	+		MPMX19_04722	0.45	-0.2
113,175	-		MPMX19_04722	0.45	-1.1
113,175	-		MPMX19_04722	0.45	+0.8
113,175	-		MPMX19_04722	0.45	-1.5
113,175	-		MPMX19_04722	0.45	-1.3
113,175	-		MPMX19_04722	0.45	-0.9