Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02152

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,248,077	+		MPMX19_02151	0.58	-3.0
2,248,078	-		MPMX19_02151	0.58	-1.4
2,248,107	+		MPMX19_02151	0.59	+0.1
2,248,108	-		MPMX19_02151	0.59	-1.4
2,248,108	-		MPMX19_02151	0.59	-1.0
2,248,108	-		MPMX19_02151	0.59	-2.5
2,248,108	-		MPMX19_02151	0.59	-0.9
2,248,108	-		MPMX19_02151	0.59	-1.5
2,248,164	+		MPMX19_02151	0.63	+0.9
2,248,164	+		MPMX19_02151	0.63	-2.5
2,248,164	+		MPMX19_02151	0.63	-3.2
2,248,164	+		MPMX19_02151	0.63	-1.1
2,248,164	+		MPMX19_02151	0.63	-0.9
2,248,164	+		MPMX19_02151	0.63	+0.9
2,248,164	+		MPMX19_02151	0.63	-1.8
2,248,164	+		MPMX19_02151	0.63	-0.1
2,248,164	+		MPMX19_02151	0.63	+0.4
2,248,164	+		MPMX19_02151	0.63	+0.4
2,248,164	+		MPMX19_02151	0.63	-0.1
2,248,164	+		MPMX19_02151	0.63	-0.7
2,248,164	+		MPMX19_02151	0.63	-0.1
2,248,164	+		MPMX19_02151	0.63	-1.2
2,248,398	+		MPMX19_02151	0.76	-0.1
2,248,398	+		MPMX19_02151	0.76	-1.2
2,248,398	+		MPMX19_02151	0.76	-0.1
2,248,398	+		MPMX19_02151	0.76	-0.4
2,248,398	+		MPMX19_02151	0.76	-0.9
2,248,398	+		MPMX19_02151	0.76	-0.1
2,248,398	+		MPMX19_02151	0.76	-1.4
2,248,398	+		MPMX19_02151	0.76	+0.1
2,248,398	+		MPMX19_02151	0.76	-2.6
2,248,398	+		MPMX19_02151	0.76	-1.5
2,248,399	-		MPMX19_02151	0.76	-2.4
2,248,399	-		MPMX19_02151	0.76	+0.2
2,248,399	-		MPMX19_02151	0.76	-1.1
2,248,399	-		MPMX19_02151	0.76	-2.1
2,248,399	-		MPMX19_02151	0.76	-0.3
2,248,399	-		MPMX19_02151	0.76	+0.6
2,248,399	-		MPMX19_02151	0.76	-0.9
2,248,477	-		MPMX19_02151	0.81	-1.4
2,248,477	-		MPMX19_02151	0.81	-1.4
2,248,477	-		MPMX19_02151	0.81	-1.1
2,248,477	-		MPMX19_02151	0.81	-1.1
2,248,477	-		MPMX19_02151	0.81	+1.3
2,248,519	+		MPMX19_02151	0.83	+0.4
2,248,539	+		MPMX19_02151	0.84	-1.1
2,248,539	+		MPMX19_02151	0.84	-0.9
2,248,539	+		MPMX19_02151	0.84	-1.4
2,248,539	+		MPMX19_02151	0.84	-3.4
2,248,539	+		MPMX19_02151	0.84	-0.5
2,248,539	+		MPMX19_02151	0.84	-0.9
2,248,539	+		MPMX19_02151	0.84	-1.4
2,248,539	+		MPMX19_02151	0.84	-1.4
2,248,539	+		MPMX19_02151	0.84	-2.6
2,248,539	+		MPMX19_02151	0.84	-1.1
2,248,539	+		MPMX19_02151	0.84	+0.4
2,248,539	+		MPMX19_02151	0.84	-1.9
2,248,539	+		MPMX19_02151	0.84	-1.6
2,248,539	+		MPMX19_02151	0.84	-0.4
2,248,539	+		MPMX19_02151	0.84	-0.6
2,248,539	+		MPMX19_02151	0.84	-1.9
2,248,539	+		MPMX19_02151	0.84	-2.8
2,248,539	+		MPMX19_02151	0.84	-0.6
2,248,539	+		MPMX19_02151	0.84	+0.9
2,248,539	+		MPMX19_02151	0.84	-2.2
2,248,539	+		MPMX19_02151	0.84	-1.6
2,248,539	+		MPMX19_02151	0.84	-1.6
2,248,539	+		MPMX19_02151	0.84	-2.6
2,248,539	+		MPMX19_02151	0.84	-0.8
2,248,539	+		MPMX19_02151	0.84	-2.8
2,248,539	+		MPMX19_02151	0.84	+0.4
2,248,539	+		MPMX19_02151	0.84	-2.6
2,248,539	+		MPMX19_02151	0.84	-1.2
2,248,539	+		MPMX19_02151	0.84	-1.4
2,248,539	+		MPMX19_02151	0.84	-0.6
2,248,539	+		MPMX19_02151	0.84	-1.1
2,248,539	+		MPMX19_02151	0.84	-0.5
2,248,539	+		MPMX19_02151	0.84	-0.1
2,248,539	+		MPMX19_02151	0.84	-0.6
2,248,539	+		MPMX19_02151	0.84	-1.4
2,248,539	+		MPMX19_02151	0.84	-0.1
2,248,539	+		MPMX19_02151	0.84	-1.1
2,248,539	+		MPMX19_02151	0.84	-3.1
2,248,539	+		MPMX19_02151	0.84	-1.1
2,248,539	+		MPMX19_02151	0.84	+0.2
2,248,540	-		MPMX19_02151	0.84	+0.3
2,248,540	-		MPMX19_02151	0.84	-1.9
2,248,540	-		MPMX19_02151	0.84	-1.2
2,248,540	-		MPMX19_02151	0.84	-2.2
2,248,540	-		MPMX19_02151	0.84	-0.1
2,248,540	-		MPMX19_02151	0.84	-2.1
2,248,540	-		MPMX19_02151	0.84	-2.4
2,248,540	-		MPMX19_02151	0.84	-1.9
2,248,540	-		MPMX19_02151	0.84	-1.5
2,248,540	-		MPMX19_02151	0.84	-1.5
2,248,540	-		MPMX19_02151	0.84	-0.1
2,248,540	-		MPMX19_02151	0.84	-1.1
2,248,540	-		MPMX19_02151	0.84	-1.2
2,248,540	-		MPMX19_02151	0.84	-1.6
2,248,540	-		MPMX19_02151	0.84	-0.1
2,248,540	-		MPMX19_02151	0.84	-0.6
2,248,540	-		MPMX19_02151	0.84	-1.2
2,248,540	-		MPMX19_02151	0.84	-2.3
2,248,540	-		MPMX19_02151	0.84	-1.4
2,248,540	-		MPMX19_02151	0.84	-0.6
2,248,540	-		MPMX19_02151	0.84	-1.4
2,248,540	-		MPMX19_02151	0.84	+0.1
2,248,540	-		MPMX19_02151	0.84	-1.9
2,248,540	-		MPMX19_02151	0.84	-3.1
2,248,540	-		MPMX19_02151	0.84	-0.5
2,248,540	-		MPMX19_02151	0.84	-0.2
2,248,540	-		MPMX19_02151	0.84	-1.5
2,248,540	-		MPMX19_02151	0.84	-1.4
2,248,540	-		MPMX19_02151	0.84	-1.3
2,248,540	-		MPMX19_02151	0.84	-1.4
2,248,540	-		MPMX19_02151	0.84	-1.6
2,248,542	+		MPMX19_02151	0.84	-1.9
2,248,542	+		MPMX19_02151	0.84	-1.1
2,248,542	+		MPMX19_02151	0.84	-0.1
2,248,542	+		MPMX19_02151	0.84	+0.9
2,248,542	+		MPMX19_02151	0.84	-0.2
2,248,542	+		MPMX19_02151	0.84	+0.4
2,248,542	+		MPMX19_02151	0.84	+1.4
2,248,542	+		MPMX19_02151	0.84	-1.4
2,248,543	-		MPMX19_02151	0.84	-1.2
2,248,543	-		MPMX19_02151	0.84	-1.2
2,248,543	-		MPMX19_02151	0.84	-0.1
2,248,644	+				-0.8
2,248,644	+				-1.1
2,248,644	+				+0.2
2,248,644	+				-2.0
2,248,644	+				-0.8
2,248,644	+				-1.4
2,248,644	+				-1.1
2,248,644	+				-1.4
2,248,645	-				-2.3
2,248,645	-				-1.6
2,248,645	-				-0.1
2,248,645	-				+0.2
2,248,645	-				-0.1
2,248,645	-				+0.2
2,248,767	+				-0.1
2,248,768	-				+0.2
2,248,768	-				-1.2
2,248,786	-				+1.3
2,248,890	+				-1.1
2,248,890	+				-3.5
2,248,890	+				+0.4
2,248,891	-				+0.6
2,248,891	-				-0.1
2,248,891	-				+0.6
2,248,891	-				-0.9
2,248,891	-				+0.8
2,248,891	-				-0.1
2,248,891	-				+2.2
2,248,891	-				+0.5
2,248,939	+				-0.9
2,248,939	+				-2.2
2,248,940	-				-1.6
2,249,104	+		MPMX19_02152	0.10	+0.6
2,249,104	+		MPMX19_02152	0.10	-0.4
2,249,105	-		MPMX19_02152	0.10	+2.5
2,249,105	-		MPMX19_02152	0.10	-0.3
2,249,105	-		MPMX19_02152	0.10	-0.6
2,249,105	-		MPMX19_02152	0.10	+0.7
2,249,105	-		MPMX19_02152	0.10	+1.4
2,249,149	+		MPMX19_02152	0.14	+0.2
2,249,149	+		MPMX19_02152	0.14	-0.6
2,249,150	-		MPMX19_02152	0.14	-0.6
2,249,150	-		MPMX19_02152	0.14	+0.6
2,249,194	+		MPMX19_02152	0.18	-0.1
2,249,194	+		MPMX19_02152	0.18	+0.2
2,249,194	+		MPMX19_02152	0.18	+0.5
2,249,194	+		MPMX19_02152	0.18	-1.1
2,249,194	+		MPMX19_02152	0.18	-0.4
2,249,194	+		MPMX19_02152	0.18	-1.1
2,249,194	+		MPMX19_02152	0.18	-0.3
2,249,194	+		MPMX19_02152	0.18	+0.4
2,249,194	+		MPMX19_02152	0.18	-0.6
2,249,194	+		MPMX19_02152	0.18	+0.9
2,249,194	+		MPMX19_02152	0.18	-1.1
2,249,194	+		MPMX19_02152	0.18	+0.4
2,249,195	-		MPMX19_02152	0.19	-0.4
2,249,195	-		MPMX19_02152	0.19	+1.4
2,249,195	-		MPMX19_02152	0.19	+1.4
2,249,195	-		MPMX19_02152	0.19	-0.4
2,249,195	-		MPMX19_02152	0.19	+0.1
2,249,195	-		MPMX19_02152	0.19	-0.1
2,249,195	-		MPMX19_02152	0.19	+0.7
2,249,195	-		MPMX19_02152	0.19	-0.1
2,249,195	-		MPMX19_02152	0.19	-1.1
2,249,195	-		MPMX19_02152	0.19	-0.1
2,249,281	+		MPMX19_02152	0.26	+0.4
2,249,281	+		MPMX19_02152	0.26	-2.2
2,249,281	+		MPMX19_02152	0.26	-1.4
2,249,281	+		MPMX19_02152	0.26	+0.8
2,249,281	+		MPMX19_02152	0.26	-0.6
2,249,282	-		MPMX19_02152	0.27	-1.6
2,249,282	-		MPMX19_02152	0.27	-0.1
2,249,282	-		MPMX19_02152	0.27	-1.4
2,249,282	-		MPMX19_02152	0.27	+0.2
2,249,282	-		MPMX19_02152	0.27	-0.1
2,249,282	-		MPMX19_02152	0.27	-0.2
2,249,282	-		MPMX19_02152	0.27	+0.9
2,249,282	-		MPMX19_02152	0.27	-0.4
2,249,282	-		MPMX19_02152	0.27	-0.1
2,249,282	-		MPMX19_02152	0.27	+1.5
2,249,282	-		MPMX19_02152	0.27	-0.4
2,249,282	-		MPMX19_02152	0.27	-0.6
2,249,282	-		MPMX19_02152	0.27	+0.1
2,249,282	-		MPMX19_02152	0.27	+0.6
2,249,282	-		MPMX19_02152	0.27	-2.5
2,249,282	-		MPMX19_02152	0.27	-1.9
2,249,282	-		MPMX19_02152	0.27	+0.9
2,249,365	+		MPMX19_02152	0.34	+0.4
2,249,365	+		MPMX19_02152	0.34	-0.1
2,249,365	+		MPMX19_02152	0.34	-1.6
2,249,365	+		MPMX19_02152	0.34	-1.6
2,249,365	+		MPMX19_02152	0.34	+0.5
2,249,365	+		MPMX19_02152	0.34	-0.2
2,249,365	+		MPMX19_02152	0.34	+0.5
2,249,365	+		MPMX19_02152	0.34	-0.6
2,249,365	+		MPMX19_02152	0.34	+0.6
2,249,365	+		MPMX19_02152	0.34	-0.3
2,249,365	+		MPMX19_02152	0.34	-0.1
2,249,365	+		MPMX19_02152	0.34	-1.4
2,249,365	+		MPMX19_02152	0.34	+0.3
2,249,365	+		MPMX19_02152	0.34	-0.8
2,249,366	-		MPMX19_02152	0.34	-0.4
2,249,366	-		MPMX19_02152	0.34	-1.1
2,249,366	-		MPMX19_02152	0.34	+1.5
2,249,366	-		MPMX19_02152	0.34	+0.4
2,249,366	-		MPMX19_02152	0.34	-0.1
2,249,366	-		MPMX19_02152	0.34	+0.4
2,249,366	-		MPMX19_02152	0.34	+0.4
2,249,366	-		MPMX19_02152	0.34	-0.8
2,249,366	-		MPMX19_02152	0.34	+1.3
2,249,366	-		MPMX19_02152	0.34	+0.9
2,249,366	-		MPMX19_02152	0.34	-0.1
2,249,366	-		MPMX19_02152	0.34	+0.1
2,249,548	+		MPMX19_02152	0.51	-1.1
2,249,548	+		MPMX19_02152	0.51	+1.3
2,249,548	+		MPMX19_02152	0.51	-0.7
2,249,548	+		MPMX19_02152	0.51	+0.5
2,249,549	-		MPMX19_02152	0.51	-1.4
2,249,549	-		MPMX19_02152	0.51	-1.1
2,249,549	-		MPMX19_02152	0.51	+0.4
2,249,549	-		MPMX19_02152	0.51	+0.6
2,249,549	-		MPMX19_02152	0.51	+1.3
2,249,563	+		MPMX19_02152	0.52	-0.9
2,249,564	-		MPMX19_02152	0.52	+1.5
2,249,659	+		MPMX19_02152	0.61	-0.5
2,249,659	+		MPMX19_02152	0.61	+0.1
2,249,660	-		MPMX19_02152	0.61	-1.9
2,249,660	-		MPMX19_02152	0.61	-0.1
2,249,677	+		MPMX19_02152	0.63	+0.9
2,249,677	+		MPMX19_02152	0.63	-0.1
2,249,677	+		MPMX19_02152	0.63	-1.1
2,249,677	+		MPMX19_02152	0.63	-1.4
2,249,678	-		MPMX19_02152	0.63	-1.5
2,249,842	+		MPMX19_02152	0.78	+0.7
2,249,842	+		MPMX19_02152	0.78	-0.7
2,249,842	+		MPMX19_02152	0.78	-1.3
2,249,842	+		MPMX19_02152	0.78	-0.5
2,249,842	+		MPMX19_02152	0.78	-0.4
2,249,843	-		MPMX19_02152	0.78	-0.6
2,249,888	+		MPMX19_02152	0.82	-0.5
2,249,888	+		MPMX19_02152	0.82	-0.3
2,249,889	-		MPMX19_02152	0.82	-1.1
2,249,889	-		MPMX19_02152	0.82	+1.4
2,249,889	-		MPMX19_02152	0.82	+0.9
2,249,889	-		MPMX19_02152	0.82	+0.7
2,249,889	-		MPMX19_02152	0.82	-1.4
2,249,889	-		MPMX19_02152	0.82	-0.6
2,249,889	-		MPMX19_02152	0.82	+1.1
2,250,077	+				+0.8
2,250,077	+				-0.8
2,250,077	+				-0.5
2,250,077	+				-1.4
2,250,077	+				-0.9
2,250,078	-				+0.8
2,250,127	+				+1.5
2,250,127	+				+0.4
2,250,127	+				+0.2
2,250,127	+				-0.1
2,250,127	+				-1.9
2,250,127	+				-0.1
2,250,127	+				-0.3
2,250,127	+				+0.9
2,250,127	+				-1.6
2,250,127	+				-0.5
2,250,127	+				+0.9
2,250,127	+				-0.1
2,250,127	+				-0.1
2,250,127	+				+1.4
2,250,127	+				-2.1
2,250,127	+				+1.7
2,250,127	+				-0.5
2,250,127	+				+0.5
2,250,127	+				-0.1
2,250,127	+				-0.4
2,250,127	+				-2.1
2,250,127	+				-0.1
2,250,127	+				-0.9
2,250,127	+				+0.1
2,250,127	+				+0.1
2,250,127	+				+0.2
2,250,127	+				-0.6
2,250,128	-				+0.2
2,250,128	-				+0.5
2,250,128	-				+0.1
2,250,128	-				-1.1
2,250,128	-				+0.9
2,250,128	-				-1.9
2,250,128	-				+1.5
2,250,128	-				-1.1
2,250,128	-				+0.8
2,250,128	-				+1.3
2,250,128	-				+2.3
2,250,128	-				-1.2
2,250,128	-				-0.6
2,250,128	-				+0.9
2,250,128	-				+0.2
2,250,128	-				-0.1
2,250,128	-				+1.5
2,250,128	-				+0.2
2,250,128	-				+1.3
2,250,169	+				-1.4
2,250,170	-				-0.1
2,250,197	-				+0.8
2,250,202	+				-1.1
2,250,202	+				+1.5
2,250,202	+				-1.4
2,250,202	+				-0.1
2,250,203	-				-0.4
2,250,203	-				+0.2
2,250,203	-				+0.9
2,250,203	-				+0.3
2,250,235	+				-0.6
2,250,235	+				-1.6
2,250,235	+				-0.1
2,250,235	+				-1.3
2,250,235	+				+0.4
2,250,235	+				+0.2
2,250,235	+				+0.7
2,250,235	+				+0.5
2,250,235	+				+0.4
2,250,236	-				+0.7
2,250,236	-				+1.5
2,250,236	-				-0.6
2,250,236	-				-1.9
2,250,236	-				+0.9
2,250,236	-				+0.4
2,250,236	-				+0.4
2,250,236	-				-1.9
2,250,236	-				+0.4
2,250,236	-				-0.4
2,250,236	-				+1.2
2,250,236	-				-0.9
2,250,236	-				-0.6
2,250,236	-				+0.4
2,250,236	-				+0.0
2,250,236	-				-0.6
2,250,236	-				+0.6
2,250,300	+				+0.4
2,250,300	+				-0.1
2,250,301	-				+0.2
2,250,301	-				-0.9
2,250,301	-				-1.1
2,250,478	+		MPMX19_02153	0.24	+0.1
2,250,478	+		MPMX19_02153	0.24	-1.5
2,250,478	+		MPMX19_02153	0.24	-2.1
2,250,479	-		MPMX19_02153	0.24	-0.7
2,250,479	-		MPMX19_02153	0.24	-1.9
2,250,479	-		MPMX19_02153	0.24	+1.5
2,250,479	-		MPMX19_02153	0.24	+0.9
2,250,479	-		MPMX19_02153	0.24	-1.2
2,250,494	-		MPMX19_02153	0.26	+0.2
2,250,787	+		MPMX19_02153	0.60	+0.5
2,250,787	+		MPMX19_02153	0.60	+0.4
2,250,788	-		MPMX19_02153	0.60	-0.1
2,250,788	-		MPMX19_02153	0.60	-0.6