Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01916

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,999,890	+		MPMX19_01914	0.22	+0.6
1,999,890	+		MPMX19_01914	0.22	+1.6
1,999,890	+		MPMX19_01914	0.22	+1.7
1,999,890	+		MPMX19_01914	0.22	+0.7
1,999,890	+		MPMX19_01914	0.22	+1.2
1,999,890	+		MPMX19_01914	0.22	+1.2
1,999,890	+		MPMX19_01914	0.22	+2.7
1,999,890	+		MPMX19_01914	0.22	+0.5
1,999,890	+		MPMX19_01914	0.22	+2.0
1,999,891	-		MPMX19_01914	0.22	+0.8
1,999,891	-		MPMX19_01914	0.22	+0.6
1,999,891	-		MPMX19_01914	0.22	+1.1
1,999,891	-		MPMX19_01914	0.22	+2.0
1,999,891	-		MPMX19_01914	0.22	+0.0
1,999,891	-		MPMX19_01914	0.22	+0.3
1,999,891	-		MPMX19_01914	0.22	+1.2
1,999,891	-		MPMX19_01914	0.22	+2.6
1,999,891	-		MPMX19_01914	0.22	-1.3
1,999,891	-		MPMX19_01914	0.22	+0.3
2,000,010	+		MPMX19_01914	0.41	+1.5
2,000,010	+		MPMX19_01914	0.41	+0.5
2,000,010	+		MPMX19_01914	0.41	+2.2
2,000,011	-		MPMX19_01914	0.41	+1.0
2,000,011	-		MPMX19_01914	0.41	+0.6
2,000,011	-		MPMX19_01914	0.41	+1.4
2,000,011	-		MPMX19_01914	0.41	+0.9
2,000,052	+		MPMX19_01914	0.47	+0.2
2,000,052	+		MPMX19_01914	0.47	+0.7
2,000,053	-		MPMX19_01914	0.47	+2.0
2,000,097	+		MPMX19_01914	0.54	+0.4
2,000,097	+		MPMX19_01914	0.54	-1.6
2,000,097	+		MPMX19_01914	0.54	+0.4
2,000,097	+		MPMX19_01914	0.54	+0.5
2,000,098	-		MPMX19_01914	0.54	+1.0
2,000,098	-		MPMX19_01914	0.54	+0.1
2,000,098	-		MPMX19_01914	0.54	-0.6
2,000,098	-		MPMX19_01914	0.54	-0.4
2,000,394	+				+1.7
2,000,394	+				-0.8
2,000,394	+				+0.7
2,000,395	-				+0.3
2,000,395	-				+0.8
2,000,395	-				+0.0
2,000,395	-				-1.0
2,000,395	-				-0.6
2,000,462	+				+0.1
2,000,462	+				+1.4
2,000,462	+				+1.6
2,000,462	+				+1.6
2,000,462	+				+0.1
2,000,462	+				-0.6
2,000,462	+				+0.3
2,000,462	+				-1.7
2,000,463	-				-0.6
2,000,463	-				+0.6
2,000,463	-				+0.0
2,000,463	-				+1.0
2,000,463	-				+0.2
2,000,463	-				-0.3
2,000,463	-				+0.5
2,000,519	+				+0.0
2,000,519	+				+0.4
2,000,519	+				+0.4
2,000,520	-				-0.6
2,000,520	-				-1.4
2,000,520	-				-0.7
2,000,874	+				+3.0
2,000,874	+				+1.5
2,000,875	-				-1.0
2,000,875	-				+0.6
2,001,233	+		MPMX19_01916	0.30	+0.0
2,001,488	+		MPMX19_01916	0.52	-0.8
2,001,488	+		MPMX19_01916	0.52	-1.6
2,001,488	+		MPMX19_01916	0.52	-1.0
2,001,488	+		MPMX19_01916	0.52	-0.2
2,001,488	+		MPMX19_01916	0.52	+0.0
2,001,489	-		MPMX19_01916	0.52	-0.3
2,001,489	-		MPMX19_01916	0.52	-1.5
2,001,489	-		MPMX19_01916	0.52	-2.0
2,001,489	-		MPMX19_01916	0.52	-1.3
2,001,489	-		MPMX19_01916	0.52	-1.3
2,001,692	+		MPMX19_01916	0.69	-0.6
2,001,692	+		MPMX19_01916	0.69	-1.0
2,001,692	+		MPMX19_01916	0.69	+1.0
2,001,692	+		MPMX19_01916	0.69	-2.4
2,001,692	+		MPMX19_01916	0.69	-0.3
2,001,692	+		MPMX19_01916	0.69	-1.0
2,001,692	+		MPMX19_01916	0.69	+0.3
2,001,692	+		MPMX19_01916	0.69	-1.4
2,001,692	+		MPMX19_01916	0.69	-2.2
2,001,692	+		MPMX19_01916	0.69	-2.5
2,001,693	-		MPMX19_01916	0.69	-2.2
2,001,693	-		MPMX19_01916	0.69	-0.8
2,001,693	-		MPMX19_01916	0.69	+0.0
2,001,693	-		MPMX19_01916	0.69	-1.6
2,001,693	-		MPMX19_01916	0.69	+1.0
2,001,693	-		MPMX19_01916	0.69	-0.4
2,001,693	-		MPMX19_01916	0.69	+1.0
2,001,693	-		MPMX19_01916	0.69	-1.4
2,001,731	+		MPMX19_01916	0.73	-0.6
2,001,731	+		MPMX19_01916	0.73	-1.6
2,001,731	+		MPMX19_01916	0.73	-0.6
2,001,732	-		MPMX19_01916	0.73	-0.3
2,001,732	-		MPMX19_01916	0.73	+0.0
2,001,794	+		MPMX19_01916	0.78	+0.0
2,001,956	+				-1.6
2,001,956	+				+0.0
2,001,956	+				-0.6
2,001,956	+				-1.2
2,001,956	+				-0.7
2,001,956	+				+0.0
2,001,957	-				+0.0
2,001,957	-				+1.0
2,001,957	-				+0.6
2,001,957	-				-2.7
2,002,007	+				-0.6
2,002,007	+				+0.3
2,002,007	+				-1.6
2,002,008	-				-1.0
2,002,008	-				-0.4
2,002,008	-				+1.6
2,002,008	-				-1.0
2,002,008	-				+0.3
2,002,008	-				-1.3
2,002,008	-				-0.2
2,002,008	-				+0.6
2,002,013	+				-0.6
2,002,013	+				+1.0
2,002,013	+				-1.8
2,002,013	+				-0.6
2,002,014	-				-1.7
2,002,014	-				+2.4
2,002,014	-				+0.7
2,002,014	-				-1.6
2,002,014	-				+0.4
2,002,014	-				+1.0
2,002,014	-				+1.0
2,002,014	-				-1.0
2,002,014	-				-0.8
2,002,014	-				-1.5
2,002,014	-				+0.0
2,002,273	+				-0.8
2,002,273	+				+0.0
2,002,273	+				-0.3
2,002,273	+				-0.6
2,002,273	+				-2.2
2,002,273	+				+1.0
2,002,273	+				-2.1
2,002,273	+				+1.0
2,002,273	+				+0.0
2,002,273	+				+0.4
2,002,273	+				-0.6
2,002,273	+				-2.0
2,002,273	+				-0.3
2,002,273	+				-0.7
2,002,273	+				-1.3
2,002,273	+				-1.2
2,002,273	+				-1.1
2,002,273	+				+0.0
2,002,273	+				-1.0
2,002,273	+				-2.0
2,002,273	+				-2.5
2,002,273	+				+1.0
2,002,273	+				-1.3
2,002,273	+				-0.9
2,002,273	+				-1.0
2,002,274	-				-1.2
2,002,274	-				-0.2
2,002,274	-				+0.5
2,002,274	-				-0.7
2,002,274	-				-0.8
2,002,274	-				-1.2
2,002,274	-				+0.5
2,002,274	-				+0.2
2,002,274	-				-1.2
2,002,274	-				+0.5
2,002,274	-				-0.6
2,002,274	-				+0.0
2,002,274	-				-1.0
2,002,274	-				-0.5
2,002,274	-				-1.8
2,002,274	-				-1.6
2,002,274	-				-0.6
2,002,274	-				+0.0
2,002,274	-				+0.6
2,002,274	-				+0.3
2,002,274	-				-0.8
2,002,274	-				+1.2
2,002,274	-				-1.6
2,002,274	-				-0.2
2,002,274	-				+0.6
2,002,274	-				+0.4
2,002,274	-				-2.2
2,002,274	-				-1.2
2,002,274	-				-2.2
2,002,274	-				+0.0
2,002,274	-				-0.2
2,002,274	-				-1.6
2,002,274	-				-0.1
2,002,277	+				-0.3
2,002,277	+				-1.6
2,002,277	+				+0.2
2,002,277	+				-0.6
2,002,277	+				-1.0
2,002,277	+				-0.6
2,002,277	+				-2.0
2,002,277	+				-2.2
2,002,278	-				+0.3
2,002,278	-				+0.0
2,002,278	-				-2.3
2,002,278	-				+0.7
2,002,278	-				+0.0
2,002,278	-				+1.6
2,002,278	-				-0.3
2,002,278	-				+1.3
2,002,278	-				-1.6
2,002,278	-				-1.3
2,002,278	-				-0.7
2,002,316	+				+0.7
2,002,316	+				-0.6
2,002,316	+				+0.0
2,002,317	-				-0.7
2,002,317	-				-1.4
2,002,375	+				+0.3
2,002,376	-				-0.6
2,002,376	-				-0.2
2,002,376	-				-1.0
2,002,376	-				+0.4
2,002,819	+		MPMX19_01917	0.87	-0.8
2,002,819	+		MPMX19_01917	0.87	+0.0
2,002,819	+		MPMX19_01917	0.87	+0.0
2,002,820	-		MPMX19_01917	0.87	-1.3
2,002,820	-		MPMX19_01917	0.87	+0.7
2,002,820	-		MPMX19_01917	0.87	+1.0
2,002,820	-		MPMX19_01917	0.87	+0.5
2,002,820	-		MPMX19_01917	0.87	+0.2
2,002,899	+				-0.6
2,002,944	+				-1.6
2,002,944	+				-1.0
2,002,945	-				-0.6
2,002,945	-				-0.6
2,003,006	+				-1.0
2,003,006	+				-0.3
2,003,006	+				+0.4
2,003,007	-				-0.8
2,003,007	-				-0.7
2,003,053	+				+0.0