Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06174 and MPMX19_06175 are separated by 99 nucleotides MPMX19_06175 and MPMX19_06176 are separated by 14 nucleotides
MPMX19_06174: MPMX19_06174 - Inner membrane metabolite transport protein YhjE, at 363,442 to 364,752
_06174
MPMX19_06175: MPMX19_06175 - hypothetical protein, at 364,852 to 366,042
_06175
MPMX19_06176: MPMX19_06176 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 366,057 to 368,054
_06176
Position (kb) 364
365
366
367 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 364.078 kb on + strand, within MPMX19_06174 at 364.140 kb on - strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.253 kb on + strand, within MPMX19_06174 at 364.253 kb on + strand, within MPMX19_06174 at 364.254 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.466 kb on + strand, within MPMX19_06174 at 364.466 kb on + strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.571 kb on + strand, within MPMX19_06174 at 364.571 kb on + strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.617 kb on - strand, within MPMX19_06174 at 364.726 kb on + strand at 364.726 kb on + strand at 364.727 kb on - strand at 364.727 kb on - strand at 364.770 kb on - strand at 364.770 kb on - strand at 364.798 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.893 kb on - strand at 365.465 kb on - strand, within MPMX19_06175 at 365.491 kb on + strand, within MPMX19_06175 at 365.548 kb on + strand, within MPMX19_06175 at 365.549 kb on - strand, within MPMX19_06175 at 366.190 kb on - strand at 366.207 kb on + strand at 366.943 kb on - strand, within MPMX19_06176
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 364,078 + MPMX19_06174 0.49 -1.7 364,140 - MPMX19_06174 0.53 -0.1 364,190 + MPMX19_06174 0.57 -0.2 364,190 + MPMX19_06174 0.57 +0.9 364,190 + MPMX19_06174 0.57 +1.3 364,190 + MPMX19_06174 0.57 +2.2 364,191 - MPMX19_06174 0.57 -0.1 364,191 - MPMX19_06174 0.57 -0.9 364,191 - MPMX19_06174 0.57 +0.9 364,191 - MPMX19_06174 0.57 +1.6 364,191 - MPMX19_06174 0.57 -1.9 364,191 - MPMX19_06174 0.57 -0.9 364,191 - MPMX19_06174 0.57 -1.1 364,191 - MPMX19_06174 0.57 -1.1 364,191 - MPMX19_06174 0.57 -1.5 364,191 - MPMX19_06174 0.57 +0.9 364,191 - MPMX19_06174 0.57 +0.7 364,191 - MPMX19_06174 0.57 +1.1 364,191 - MPMX19_06174 0.57 +1.4 364,191 - MPMX19_06174 0.57 +0.4 364,253 + MPMX19_06174 0.62 -0.7 364,253 + MPMX19_06174 0.62 -1.1 364,254 - MPMX19_06174 0.62 -0.5 364,389 - MPMX19_06174 0.72 -1.9 364,389 - MPMX19_06174 0.72 +1.1 364,389 - MPMX19_06174 0.72 -1.1 364,389 - MPMX19_06174 0.72 +0.9 364,466 + MPMX19_06174 0.78 -1.5 364,466 + MPMX19_06174 0.78 +0.5 364,467 - MPMX19_06174 0.78 +0.0 364,467 - MPMX19_06174 0.78 -1.0 364,467 - MPMX19_06174 0.78 -0.7 364,467 - MPMX19_06174 0.78 -0.3 364,571 + MPMX19_06174 0.86 -1.9 364,571 + MPMX19_06174 0.86 -0.1 364,572 - MPMX19_06174 0.86 +0.9 364,572 - MPMX19_06174 0.86 +3.2 364,572 - MPMX19_06174 0.86 -1.7 364,572 - MPMX19_06174 0.86 -0.3 364,572 - MPMX19_06174 0.86 +0.3 364,572 - MPMX19_06174 0.86 +0.7 364,572 - MPMX19_06174 0.86 -0.5 364,572 - MPMX19_06174 0.86 +0.3 364,617 - MPMX19_06174 0.90 +0.3 364,726 + -0.6 364,726 + +0.2 364,727 - +0.3 364,727 - -0.7 364,770 - -1.1 364,770 - -2.1 364,798 + -1.5 364,892 + -2.1 364,892 + +0.3 364,892 + -0.4 364,892 + -1.7 364,893 - -0.5 365,465 - MPMX19_06175 0.51 -1.1 365,491 + MPMX19_06175 0.54 -0.5 365,548 + MPMX19_06175 0.58 -1.5 365,549 - MPMX19_06175 0.59 -1.7 366,190 - -0.7 366,207 + -1.7 366,943 - MPMX19_06176 0.44 -0.7
Or see this region's nucleotide sequence