Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02334

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,457,294	+		MPMX19_02333	0.57	-1.2
2,457,294	+		MPMX19_02333	0.57	-0.6
2,457,294	+		MPMX19_02333	0.57	-0.2
2,457,295	-		MPMX19_02333	0.57	-0.8
2,457,295	-		MPMX19_02333	0.57	-1.0
2,457,302	-		MPMX19_02333	0.58	-1.4
2,457,330	+		MPMX19_02333	0.60	-0.2
2,457,330	+		MPMX19_02333	0.60	-0.1
2,457,347	+		MPMX19_02333	0.61	-0.8
2,457,347	+		MPMX19_02333	0.61	+0.4
2,457,347	+		MPMX19_02333	0.61	-0.6
2,457,347	+		MPMX19_02333	0.61	-1.2
2,457,347	+		MPMX19_02333	0.61	-0.1
2,457,347	+		MPMX19_02333	0.61	+0.5
2,457,347	+		MPMX19_02333	0.61	-0.2
2,457,347	+		MPMX19_02333	0.61	-2.2
2,457,347	+		MPMX19_02333	0.61	-0.8
2,457,348	-		MPMX19_02333	0.61	+0.2
2,457,348	-		MPMX19_02333	0.61	-1.4
2,457,348	-		MPMX19_02333	0.61	-2.0
2,457,348	-		MPMX19_02333	0.61	+0.5
2,457,348	-		MPMX19_02333	0.61	-1.3
2,457,348	-		MPMX19_02333	0.61	+0.8
2,457,348	-		MPMX19_02333	0.61	-0.7
2,457,348	-		MPMX19_02333	0.61	+0.2
2,457,379	+		MPMX19_02333	0.63	-1.4
2,457,380	-		MPMX19_02333	0.63	-0.2
2,457,380	-		MPMX19_02333	0.63	-0.4
2,457,381	+		MPMX19_02333	0.63	-1.4
2,457,381	+		MPMX19_02333	0.63	-0.5
2,457,382	-		MPMX19_02333	0.63	-1.2
2,457,382	-		MPMX19_02333	0.63	-1.1
2,457,382	-		MPMX19_02333	0.63	-1.7
2,457,389	+		MPMX19_02333	0.63	-1.2
2,457,389	+		MPMX19_02333	0.63	-1.0
2,457,389	+		MPMX19_02333	0.63	-2.4
2,457,389	+		MPMX19_02333	0.63	+0.8
2,457,389	+		MPMX19_02333	0.63	-0.4
2,457,389	+		MPMX19_02333	0.63	-1.0
2,457,389	+		MPMX19_02333	0.63	+0.5
2,457,389	+		MPMX19_02333	0.63	-0.8
2,457,390	-		MPMX19_02333	0.63	-1.5
2,457,390	-		MPMX19_02333	0.63	+0.0
2,457,393	+		MPMX19_02333	0.64	-1.4
2,457,393	+		MPMX19_02333	0.64	+1.2
2,457,393	+		MPMX19_02333	0.64	-0.8
2,457,394	-		MPMX19_02333	0.64	-2.2
2,457,394	-		MPMX19_02333	0.64	-0.5
2,457,394	-		MPMX19_02333	0.64	-1.5
2,457,394	-		MPMX19_02333	0.64	-0.2
2,457,394	-		MPMX19_02333	0.64	-0.3
2,457,394	-		MPMX19_02333	0.64	-1.0
2,457,395	+		MPMX19_02333	0.64	-0.2
2,457,418	+		MPMX19_02333	0.65	+0.4
2,457,418	+		MPMX19_02333	0.65	+0.0
2,457,418	+		MPMX19_02333	0.65	-0.5
2,457,418	+		MPMX19_02333	0.65	-0.4
2,457,418	+		MPMX19_02333	0.65	-1.4
2,457,418	+		MPMX19_02333	0.65	-0.2
2,457,418	+		MPMX19_02333	0.65	-0.2
2,457,419	-		MPMX19_02333	0.65	+0.8
2,457,419	-		MPMX19_02333	0.65	+0.4
2,457,419	-		MPMX19_02333	0.65	+1.4
2,457,419	-		MPMX19_02333	0.65	-0.5
2,457,419	-		MPMX19_02333	0.65	-1.8
2,457,419	-		MPMX19_02333	0.65	-1.2
2,457,419	-		MPMX19_02333	0.65	-1.8
2,457,473	+		MPMX19_02333	0.69	-1.0
2,457,473	+		MPMX19_02333	0.69	+0.2
2,457,473	+		MPMX19_02333	0.69	+0.6
2,457,473	+		MPMX19_02333	0.69	-1.1
2,457,474	-		MPMX19_02333	0.69	-1.0
2,457,562	+		MPMX19_02333	0.74	-0.8
2,457,562	+		MPMX19_02333	0.74	-3.4
2,457,562	+		MPMX19_02333	0.74	-1.5
2,457,562	+		MPMX19_02333	0.74	+0.0
2,457,562	+		MPMX19_02333	0.74	+0.5
2,457,563	-		MPMX19_02333	0.74	+0.0
2,457,563	-		MPMX19_02333	0.74	-0.6
2,457,569	+		MPMX19_02333	0.75	+1.1
2,457,569	+		MPMX19_02333	0.75	-0.2
2,457,569	+		MPMX19_02333	0.75	-0.5
2,457,569	+		MPMX19_02333	0.75	-1.0
2,457,569	+		MPMX19_02333	0.75	-0.0
2,457,569	+		MPMX19_02333	0.75	-2.0
2,457,570	-		MPMX19_02333	0.75	+0.4
2,457,570	-		MPMX19_02333	0.75	-2.4
2,457,570	-		MPMX19_02333	0.75	-0.2
2,457,570	-		MPMX19_02333	0.75	-1.1
2,457,570	-		MPMX19_02333	0.75	-0.8
2,457,570	-		MPMX19_02333	0.75	-2.4
2,457,570	-		MPMX19_02333	0.75	-0.1
2,457,576	+		MPMX19_02333	0.75	+0.8
2,457,576	+		MPMX19_02333	0.75	-0.4
2,457,576	+		MPMX19_02333	0.75	+0.3
2,457,576	+		MPMX19_02333	0.75	-0.7
2,457,576	+		MPMX19_02333	0.75	-1.2
2,457,576	+		MPMX19_02333	0.75	+1.2
2,457,576	+		MPMX19_02333	0.75	-0.9
2,457,577	-		MPMX19_02333	0.75	-0.0
2,457,645	+		MPMX19_02333	0.79	+0.8
2,457,645	+		MPMX19_02333	0.79	-0.7
2,457,645	+		MPMX19_02333	0.79	-0.2
2,457,645	+		MPMX19_02333	0.79	+0.1
2,457,645	+		MPMX19_02333	0.79	-0.2
2,457,645	+		MPMX19_02333	0.79	+0.0
2,457,645	+		MPMX19_02333	0.79	-0.8
2,457,645	+		MPMX19_02333	0.79	-0.5
2,457,645	+		MPMX19_02333	0.79	-0.2
2,457,645	+		MPMX19_02333	0.79	+0.5
2,457,645	+		MPMX19_02333	0.79	-0.2
2,457,645	+		MPMX19_02333	0.79	-1.0
2,457,646	-		MPMX19_02333	0.79	-0.5
2,457,646	-		MPMX19_02333	0.79	-2.0
2,457,646	-		MPMX19_02333	0.79	-0.5
2,457,646	-		MPMX19_02333	0.79	-0.0
2,457,646	-		MPMX19_02333	0.79	-1.8
2,457,646	-		MPMX19_02333	0.79	-0.8
2,457,646	-		MPMX19_02333	0.79	-0.5
2,457,646	-		MPMX19_02333	0.79	+0.1
2,457,658	-		MPMX19_02333	0.80	-0.1
2,457,662	+		MPMX19_02333	0.80	-0.2
2,457,663	-		MPMX19_02333	0.80	-1.8
2,457,663	-		MPMX19_02333	0.80	+0.0
2,457,663	-		MPMX19_02333	0.80	+0.2
2,457,670	+		MPMX19_02333	0.81	+0.0
2,457,744	+		MPMX19_02333	0.86	-0.2
2,457,744	+		MPMX19_02333	0.86	+0.5
2,457,744	+		MPMX19_02333	0.86	+0.6
2,457,744	+		MPMX19_02333	0.86	-0.4
2,457,745	-		MPMX19_02333	0.86	-2.0
2,457,745	-		MPMX19_02333	0.86	-2.3
2,457,745	-		MPMX19_02333	0.86	-0.8
2,457,745	-		MPMX19_02333	0.86	-1.5
2,457,773	+		MPMX19_02333	0.87	-0.8
2,457,773	+		MPMX19_02333	0.87	+0.0
2,457,773	+		MPMX19_02333	0.87	+0.1
2,457,773	+		MPMX19_02333	0.87	-0.2
2,457,774	-		MPMX19_02333	0.87	-0.2
2,457,774	-		MPMX19_02333	0.87	+2.4
2,457,774	-		MPMX19_02333	0.87	-1.0
2,457,774	-		MPMX19_02333	0.87	-0.4
2,457,774	-		MPMX19_02333	0.87	-0.8
2,457,774	-		MPMX19_02333	0.87	-1.1
2,457,782	+		MPMX19_02333	0.88	-0.2
2,457,782	+		MPMX19_02333	0.88	-0.4
2,457,782	+		MPMX19_02333	0.88	-1.8
2,457,782	+		MPMX19_02333	0.88	-0.0
2,457,783	-		MPMX19_02333	0.88	-1.2
2,457,812	+		MPMX19_02333	0.90	-0.8
2,457,812	+		MPMX19_02333	0.90	-1.0
2,457,812	+		MPMX19_02333	0.90	+0.2
2,457,813	-		MPMX19_02333	0.90	-1.0
2,457,851	-				-1.0
2,457,881	+				-1.0
2,457,881	+				-0.8
2,457,881	+				+0.5
2,457,882	-				+0.0
2,457,882	-				-1.2
2,457,882	-				+0.8
2,457,882	-				-0.7
2,457,882	-				-1.0
2,457,882	-				-0.8
2,457,882	-				+0.5
2,457,944	+				-0.4
2,457,944	+				+0.4
2,457,944	+				+0.2
2,457,945	-				-1.5
2,457,945	-				+0.0
2,457,945	-				-2.5
2,457,945	-				-1.3
2,458,010	+				+1.0
2,458,051	-				+0.3
2,458,095	+				-0.3
2,458,095	+				-0.8
2,458,095	+				+0.4
2,458,106	+				+0.2
2,458,106	+				+0.3
2,458,106	+				-2.4
2,458,107	-				+0.0
2,458,107	-				-1.2
2,458,107	-				-1.4
2,458,142	+				-0.4
2,458,142	+				-0.1
2,458,142	+				-0.4
2,458,143	-				-0.8
2,458,143	-				+0.2
2,458,193	-				+0.3
2,458,216	+				-0.9
2,458,216	+				-0.6
2,458,216	+				-1.0
2,458,216	+				-1.2
2,458,216	+				-0.8
2,458,216	+				+0.5
2,458,216	+				-0.3
2,458,216	+				+0.8
2,458,216	+				-0.1
2,458,216	+				-1.4
2,458,216	+				-1.8
2,458,216	+				+1.3
2,458,216	+				-0.8
2,458,217	-				-2.7
2,458,217	-				-1.4
2,458,217	-				-1.8
2,458,217	-				-0.2
2,458,217	-				+0.7
2,458,217	-				-0.8
2,458,217	-				+0.3
2,458,217	-				-1.0
2,458,217	-				+0.1
2,458,217	-				-1.2
2,458,217	-				-0.1
2,458,217	-				-0.6
2,458,320	+				-1.5
2,458,320	+				-1.8
2,458,320	+				-1.7
2,458,321	-				-0.1
2,458,321	-				+0.6
2,458,321	-				-0.4
2,458,321	-				-1.8
2,458,343	+				-0.2
2,458,343	+				+0.6
2,458,343	+				-1.2
2,458,343	+				-0.8
2,458,343	+				-0.5
2,458,343	+				-0.2
2,458,343	+				-0.7
2,458,343	+				-1.0
2,458,343	+				+0.8
2,458,343	+				-0.4
2,458,343	+				+0.4
2,458,343	+				-0.9
2,458,343	+				-0.4
2,458,343	+				+0.4
2,458,343	+				-0.8
2,458,343	+				+1.4
2,458,343	+				-1.8
2,458,343	+				-0.4
2,458,343	+				-0.4
2,458,344	-				+0.5
2,458,344	-				-0.2
2,458,344	-				-1.5
2,458,344	-				+0.5
2,458,344	-				-0.5
2,458,344	-				+0.5
2,458,344	-				-1.2
2,458,344	-				+1.0
2,458,344	-				-0.2
2,458,344	-				+1.6
2,458,344	-				+0.8
2,458,344	-				+0.8
2,458,344	-				+0.4
2,458,344	-				+0.2
2,458,344	-				+0.3
2,458,344	-				+1.1
2,458,344	-				-0.5
2,458,344	-				-0.4
2,458,344	-				-0.8
2,458,344	-				-2.0
2,458,344	-				+0.0
2,458,344	-				-0.2
2,458,380	+		MPMX19_02334	0.16	-1.2
2,458,380	+		MPMX19_02334	0.16	-0.5
2,458,380	+		MPMX19_02334	0.16	+0.8
2,458,380	+		MPMX19_02334	0.16	-0.2
2,458,380	+		MPMX19_02334	0.16	+0.2
2,458,381	-		MPMX19_02334	0.17	+0.5
2,458,381	-		MPMX19_02334	0.17	+1.5
2,458,381	-		MPMX19_02334	0.17	+0.5
2,458,381	-		MPMX19_02334	0.17	+1.2
2,458,381	-		MPMX19_02334	0.17	-1.5
2,458,658	+		MPMX19_02334	0.67	-0.1
2,458,658	+		MPMX19_02334	0.67	+0.8
2,458,658	+		MPMX19_02334	0.67	-0.8
2,458,659	-		MPMX19_02334	0.68	-1.0
2,459,315	+				+0.2
2,459,315	+				-0.2
2,459,315	+				+1.5
2,459,315	+				-0.5
2,459,315	+				+0.5
2,459,315	+				+1.8
2,459,315	+				-0.2
2,459,315	+				-0.0
2,459,315	+				+0.8
2,459,315	+				-1.2
2,459,316	-				+0.8
2,459,316	-				-0.4
2,459,316	-				-0.7
2,459,316	-				-1.0
2,459,316	-				+0.8
2,459,316	-				-0.2
2,459,316	-				-0.6
2,459,537	+				-1.2
2,459,537	+				-0.4
2,459,537	+				-0.7
2,459,537	+				+0.2
2,459,537	+				+0.0
2,459,537	+				+1.8
2,459,537	+				+0.5
2,459,537	+				+0.8
2,459,537	+				+0.3
2,459,537	+				+0.8
2,459,537	+				+1.4
2,459,538	-				-0.4
2,459,538	-				+0.2
2,459,538	-				-0.2
2,459,538	-				+0.2
2,459,538	-				+0.3
2,459,538	-				-0.2
2,459,538	-				+1.1
2,459,538	-				-0.6
2,459,538	-				-0.2
2,459,538	-				-0.2
2,459,632	+				-1.2
2,459,633	-				-2.0
2,459,633	-				-0.2
2,459,687	+				-1.2
2,459,687	+				+0.2
2,459,687	+				-0.2
2,459,687	+				-1.2
2,459,688	-				+0.0
2,459,688	-				-2.2
2,459,688	-				-2.3
2,459,688	-				-1.2
2,459,688	-				-2.2
2,459,730	+		MPMX19_02335	0.12	-0.8
2,459,730	+		MPMX19_02335	0.12	-2.0
2,459,730	+		MPMX19_02335	0.12	-0.1
2,459,730	+		MPMX19_02335	0.12	-0.0
2,459,730	+		MPMX19_02335	0.12	-1.2
2,459,730	+		MPMX19_02335	0.12	+0.0
2,459,730	+		MPMX19_02335	0.12	-0.2
2,459,730	+		MPMX19_02335	0.12	-0.8
2,459,730	+		MPMX19_02335	0.12	-0.2
2,459,730	+		MPMX19_02335	0.12	+1.2
2,459,731	-		MPMX19_02335	0.13	-0.2
2,459,731	-		MPMX19_02335	0.13	-0.9
2,459,731	-		MPMX19_02335	0.13	-1.5
2,459,731	-		MPMX19_02335	0.13	-0.2
2,459,731	-		MPMX19_02335	0.13	-0.2
2,459,731	-		MPMX19_02335	0.13	+0.0
2,459,745	+		MPMX19_02335	0.15	-0.8
2,459,745	+		MPMX19_02335	0.15	-1.7
2,459,745	+		MPMX19_02335	0.15	-0.8
2,459,745	+		MPMX19_02335	0.15	+0.2
2,459,746	-		MPMX19_02335	0.16	-2.2
2,459,746	-		MPMX19_02335	0.16	+0.8
2,459,746	-		MPMX19_02335	0.16	-0.2
2,459,746	-		MPMX19_02335	0.16	-1.5
2,459,746	-		MPMX19_02335	0.16	-0.5
2,459,746	-		MPMX19_02335	0.16	-0.3
2,459,746	-		MPMX19_02335	0.16	-0.5
2,459,820	+		MPMX19_02335	0.30	-0.8
2,459,820	+		MPMX19_02335	0.30	-1.5
2,459,820	+		MPMX19_02335	0.30	-0.2
2,459,820	+		MPMX19_02335	0.30	+0.5
2,459,820	+		MPMX19_02335	0.30	+0.4
2,459,820	+		MPMX19_02335	0.30	-0.2
2,459,820	+		MPMX19_02335	0.30	-0.2
2,459,820	+		MPMX19_02335	0.30	+0.4
2,459,820	+		MPMX19_02335	0.30	-2.0
2,459,820	+		MPMX19_02335	0.30	+0.3
2,459,820	+		MPMX19_02335	0.30	+0.3
2,459,820	+		MPMX19_02335	0.30	-0.4
2,459,820	+		MPMX19_02335	0.30	+1.3
2,459,820	+		MPMX19_02335	0.30	-0.7
2,459,820	+		MPMX19_02335	0.30	+0.1
2,459,820	+		MPMX19_02335	0.30	-1.2
2,459,820	+		MPMX19_02335	0.30	-2.2
2,459,820	+		MPMX19_02335	0.30	+1.4
2,459,820	+		MPMX19_02335	0.30	+0.8
2,459,821	-		MPMX19_02335	0.30	-0.2
2,459,821	-		MPMX19_02335	0.30	-0.2
2,459,821	-		MPMX19_02335	0.30	+0.5
2,459,821	-		MPMX19_02335	0.30	-0.2
2,459,821	-		MPMX19_02335	0.30	+0.2
2,459,821	-		MPMX19_02335	0.30	+0.1
2,459,821	-		MPMX19_02335	0.30	+0.4
2,459,821	-		MPMX19_02335	0.30	+1.4
2,459,821	-		MPMX19_02335	0.30	+0.4