Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01372 and MPMX19_01373 are separated by 201 nucleotides MPMX19_01373 and MPMX19_01374 are separated by 129 nucleotides MPMX19_01374 and MPMX19_01375 overlap by 4 nucleotides MPMX19_01375 and MPMX19_01376 are separated by 15 nucleotides
MPMX19_01372: MPMX19_01372 - Membrane-bound lytic murein transglycosylase F, at 1,429,810 to 1,430,736
_01372
MPMX19_01373: MPMX19_01373 - hypothetical protein, at 1,430,938 to 1,431,273
_01373
MPMX19_01374: MPMX19_01374 - hypothetical protein, at 1,431,403 to 1,431,714
_01374
MPMX19_01375: MPMX19_01375 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 1,431,711 to 1,432,607
_01375
MPMX19_01376: MPMX19_01376 - hypothetical protein, at 1,432,623 to 1,436,987
_01376
Position (kb)
1431
1432
1433 Strain fitness (log2 ratio)
-2
-1
0
1 at 1430.718 kb on + strand at 1430.794 kb on + strand at 1430.806 kb on + strand at 1430.806 kb on + strand at 1430.808 kb on + strand at 1430.808 kb on + strand at 1430.808 kb on + strand at 1430.808 kb on + strand at 1430.808 kb on + strand at 1430.809 kb on - strand at 1430.809 kb on - strand at 1430.809 kb on - strand at 1430.809 kb on - strand at 1430.809 kb on - strand at 1430.820 kb on + strand at 1430.820 kb on + strand at 1430.820 kb on + strand at 1430.821 kb on - strand at 1430.821 kb on - strand at 1430.989 kb on + strand, within MPMX19_01373 at 1430.989 kb on + strand, within MPMX19_01373 at 1430.989 kb on + strand, within MPMX19_01373 at 1430.989 kb on + strand, within MPMX19_01373 at 1430.989 kb on + strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1430.990 kb on - strand, within MPMX19_01373 at 1432.136 kb on - strand, within MPMX19_01375 at 1432.482 kb on - strand, within MPMX19_01375 at 1432.482 kb on - strand, within MPMX19_01375 at 1432.482 kb on - strand, within MPMX19_01375 at 1432.482 kb on - strand, within MPMX19_01375 at 1432.639 kb on + strand at 1432.639 kb on + strand at 1432.639 kb on + strand at 1432.640 kb on - strand at 1432.766 kb on - strand at 1432.783 kb on + strand at 1432.783 kb on + strand at 1432.784 kb on - strand at 1432.784 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 1,430,718 + +0.1 1,430,794 + -0.9 1,430,806 + +1.6 1,430,806 + -0.5 1,430,808 + -0.9 1,430,808 + -1.7 1,430,808 + +0.2 1,430,808 + -1.5 1,430,808 + +1.1 1,430,809 - +0.1 1,430,809 - -0.0 1,430,809 - +0.9 1,430,809 - -0.9 1,430,809 - -1.2 1,430,820 + +1.1 1,430,820 + +0.3 1,430,820 + +1.1 1,430,821 - -2.1 1,430,821 - +0.7 1,430,989 + MPMX19_01373 0.15 +0.8 1,430,989 + MPMX19_01373 0.15 -0.3 1,430,989 + MPMX19_01373 0.15 +0.6 1,430,989 + MPMX19_01373 0.15 -0.1 1,430,989 + MPMX19_01373 0.15 +0.1 1,430,990 - MPMX19_01373 0.15 +0.2 1,430,990 - MPMX19_01373 0.15 -2.3 1,430,990 - MPMX19_01373 0.15 -0.2 1,430,990 - MPMX19_01373 0.15 -0.4 1,430,990 - MPMX19_01373 0.15 -0.4 1,430,990 - MPMX19_01373 0.15 +0.1 1,430,990 - MPMX19_01373 0.15 -0.8 1,430,990 - MPMX19_01373 0.15 -0.4 1,432,136 - MPMX19_01375 0.47 +1.1 1,432,482 - MPMX19_01375 0.86 -0.5 1,432,482 - MPMX19_01375 0.86 -0.2 1,432,482 - MPMX19_01375 0.86 +1.1 1,432,482 - MPMX19_01375 0.86 +1.3 1,432,639 + -0.9 1,432,639 + +0.1 1,432,639 + +1.1 1,432,640 - +1.1 1,432,766 - -0.5 1,432,783 + +1.1 1,432,783 + +1.1 1,432,784 - +0.1 1,432,784 - -0.9
Or see this region's nucleotide sequence