Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05455

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
141,956	+		MPMX19_05453	0.55	+0.8
141,957	-		MPMX19_05453	0.55	-1.2
141,957	-		MPMX19_05453	0.55	-0.2
141,957	-		MPMX19_05453	0.55	+0.0
141,957	-		MPMX19_05453	0.55	-0.2
142,060	+		MPMX19_05453	0.82	-0.2
142,060	+		MPMX19_05453	0.82	-0.5
142,060	+		MPMX19_05453	0.82	-0.9
142,060	+		MPMX19_05453	0.82	+1.2
142,061	-		MPMX19_05453	0.82	-1.2
142,061	-		MPMX19_05453	0.82	-0.9
142,061	-		MPMX19_05453	0.82	+0.8
142,072	-		MPMX19_05453	0.85	-0.9
142,072	-		MPMX19_05453	0.85	-0.2
142,072	-		MPMX19_05453	0.85	-0.4
142,139	+				-0.2
142,139	+				+0.5
142,140	-				-1.2
142,140	-				-1.1
142,164	+				-1.8
142,164	+				+1.3
142,164	+				-0.7
142,164	+				-1.1
142,164	+				-1.2
142,164	+				-2.1
142,164	+				-0.6
142,164	+				-0.8
142,164	+				-1.8
142,164	+				-0.3
142,164	+				-0.5
142,164	+				-1.6
142,164	+				-1.6
142,164	+				-0.5
142,164	+				+0.3
142,164	+				+1.3
142,165	-				-0.4
142,165	-				-1.1
142,165	-				+2.3
142,165	-				-1.7
142,165	-				-0.8
142,165	-				-0.7
142,165	-				-0.4
142,165	-				-0.1
142,165	-				-0.8
142,165	-				+0.9
142,165	-				-0.8
142,165	-				-1.9
142,165	-				-0.7
142,165	-				-1.6
142,170	+				-0.8
142,170	+				-1.1
142,171	-				-1.4
142,171	-				-0.7
142,171	-				+0.4
142,195	+				-1.1
142,196	-				-1.1
142,269	+				-0.2
142,269	+				-0.2
142,270	-				-0.1
142,270	-				-0.2
142,270	-				-2.4
142,290	-				+0.8
142,329	+				-0.8
142,329	+				-1.2
142,329	+				-0.8
142,329	+				-1.2
142,330	-				-0.1
142,330	-				-2.2
142,330	-				-0.9
142,330	-				-0.7
142,330	-				-2.2
142,330	-				-0.2
142,330	-				+0.2
142,330	-				-1.4
142,655	+		MPMX19_05454	0.69	-1.4
142,655	+		MPMX19_05454	0.69	-0.2
142,655	+		MPMX19_05454	0.69	-2.2
142,655	+		MPMX19_05454	0.69	-1.2
142,655	+		MPMX19_05454	0.69	-0.6
142,656	-		MPMX19_05454	0.69	-0.8
142,656	-		MPMX19_05454	0.69	-0.8
142,656	-		MPMX19_05454	0.69	-2.2
142,656	-		MPMX19_05454	0.69	-0.8
142,656	-		MPMX19_05454	0.69	-0.6
142,766	+				+1.8
142,766	+				+1.8
142,766	+				-0.2
142,766	+				-0.2
142,766	+				+1.1
142,766	+				-2.9
142,766	+				-1.6
142,766	+				-0.9
142,766	+				-0.2
142,766	+				-0.2
142,766	+				+0.8
142,766	+				-0.2
142,767	-				-0.1
142,767	-				-0.8
142,767	-				+0.6
142,767	-				-0.8
142,767	-				-0.5
142,767	-				-1.6
142,768	+				-2.2
142,768	+				+0.0
142,768	+				+0.8
142,768	+				-0.4
142,768	+				-0.2
142,768	+				-0.8
142,768	+				-0.2
142,768	+				-0.0
142,768	+				-0.2
142,768	+				+0.4
142,768	+				+1.3
142,768	+				-0.1
142,768	+				+0.2
142,768	+				-0.6
142,768	+				-1.2
142,769	-				-1.2
142,769	-				-0.5
142,769	-				-0.7
142,769	-				-0.2
142,769	-				-0.2
142,769	-				-0.6
142,769	-				-1.6
142,769	-				-1.4
142,769	-				+0.8
142,769	-				-0.2
142,769	-				-1.0
142,769	-				-1.6
142,769	-				-1.0
142,769	-				-0.4
142,769	-				+0.2
142,769	-				-0.5
142,769	-				+0.2
142,769	-				-2.8
142,769	-				-0.2
142,769	-				-2.2
142,769	-				-0.9
143,112	-		MPMX19_05455	0.46	-0.5
143,159	+		MPMX19_05455	0.53	-1.2
143,159	+		MPMX19_05455	0.53	-0.6
143,159	+		MPMX19_05455	0.53	-2.6
143,159	+		MPMX19_05455	0.53	-1.9
143,159	+		MPMX19_05455	0.53	-1.4
143,159	+		MPMX19_05455	0.53	-1.2
143,159	+		MPMX19_05455	0.53	+0.0
143,159	+		MPMX19_05455	0.53	-1.2
143,159	+		MPMX19_05455	0.53	-0.6
143,159	+		MPMX19_05455	0.53	-3.6
143,160	-		MPMX19_05455	0.53	+1.3
143,160	-		MPMX19_05455	0.53	-1.2
143,160	-		MPMX19_05455	0.53	-0.6
143,160	-		MPMX19_05455	0.53	-0.6
143,160	-		MPMX19_05455	0.53	-2.2
143,291	+		MPMX19_05455	0.71	-1.7
143,292	-		MPMX19_05455	0.71	-0.2
143,575	-				-1.2
143,617	+				-2.1
143,617	+				-0.8
143,617	+				+0.4
143,618	-				-2.1
143,618	-				-0.2
143,618	-				-1.6
143,618	-				-0.2
143,618	-				-1.2
143,618	-				-0.8
143,618	-				-0.6
143,744	+				-0.3
143,744	+				-0.9
143,744	+				-0.7
143,744	+				+0.0
143,744	+				+1.8
143,744	+				+0.3
143,744	+				-1.2
143,744	+				+1.0
143,744	+				-1.6
143,744	+				-0.9
143,744	+				+0.1
143,745	-				-0.9
143,745	-				+0.8
143,745	-				-0.6
143,745	-				-1.4
143,745	-				-1.3
143,745	-				-2.1
143,812	+		MPMX19_05456	0.11	-1.6
143,812	+		MPMX19_05456	0.11	+0.0
143,812	+		MPMX19_05456	0.11	-0.2
143,812	+		MPMX19_05456	0.11	+0.8
143,812	+		MPMX19_05456	0.11	-0.6
143,812	+		MPMX19_05456	0.11	-1.8
143,813	-		MPMX19_05456	0.11	-0.8
143,813	-		MPMX19_05456	0.11	+0.2
143,813	-		MPMX19_05456	0.11	-1.7
143,813	-		MPMX19_05456	0.11	-0.3
143,813	-		MPMX19_05456	0.11	-1.1
143,945	+		MPMX19_05456	0.23	-0.1
143,945	+		MPMX19_05456	0.23	-0.1
143,946	-		MPMX19_05456	0.23	-1.7
143,946	-		MPMX19_05456	0.23	-0.4
143,946	-		MPMX19_05456	0.23	-0.6
143,946	-		MPMX19_05456	0.23	-0.2
143,946	-		MPMX19_05456	0.23	-0.2
143,947	+		MPMX19_05456	0.23	-1.6
143,947	+		MPMX19_05456	0.23	-2.6
143,947	+		MPMX19_05456	0.23	+0.8
143,947	+		MPMX19_05456	0.23	+0.0
143,947	+		MPMX19_05456	0.23	-0.9
143,947	+		MPMX19_05456	0.23	-0.5
143,947	+		MPMX19_05456	0.23	+0.8
143,947	+		MPMX19_05456	0.23	+1.3
143,947	+		MPMX19_05456	0.23	-0.2
143,947	+		MPMX19_05456	0.23	-1.9
143,947	+		MPMX19_05456	0.23	-0.3
143,947	+		MPMX19_05456	0.23	-0.1
143,947	+		MPMX19_05456	0.23	+0.3
143,947	+		MPMX19_05456	0.23	-0.1
143,947	+		MPMX19_05456	0.23	+1.0
143,947	+		MPMX19_05456	0.23	-1.4
143,947	+		MPMX19_05456	0.23	-1.2
143,947	+		MPMX19_05456	0.23	-0.2
143,947	+		MPMX19_05456	0.23	-2.8
143,947	+		MPMX19_05456	0.23	-0.9
143,947	+		MPMX19_05456	0.23	-1.7
143,947	+		MPMX19_05456	0.23	-1.8
143,947	+		MPMX19_05456	0.23	-0.9
143,947	+		MPMX19_05456	0.23	-1.2
143,947	+		MPMX19_05456	0.23	-1.3
143,947	+		MPMX19_05456	0.23	+0.3
143,947	+		MPMX19_05456	0.23	+1.3
143,947	+		MPMX19_05456	0.23	-0.4
143,947	+		MPMX19_05456	0.23	+0.5
143,947	+		MPMX19_05456	0.23	-0.8
143,947	+		MPMX19_05456	0.23	+1.2
143,947	+		MPMX19_05456	0.23	-0.6
143,947	+		MPMX19_05456	0.23	-0.8
143,947	+		MPMX19_05456	0.23	-1.2
143,947	+		MPMX19_05456	0.23	-1.4
143,947	+		MPMX19_05456	0.23	-0.8
143,947	+		MPMX19_05456	0.23	+0.1
143,947	+		MPMX19_05456	0.23	+2.2
143,947	+		MPMX19_05456	0.23	-1.2
143,947	+		MPMX19_05456	0.23	-1.4
143,947	+		MPMX19_05456	0.23	-1.6
143,947	+		MPMX19_05456	0.23	-1.4
143,947	+		MPMX19_05456	0.23	-0.2
143,947	+		MPMX19_05456	0.23	-0.9
143,947	+		MPMX19_05456	0.23	+0.8
143,947	+		MPMX19_05456	0.23	-1.6
143,947	+		MPMX19_05456	0.23	-0.2
143,947	+		MPMX19_05456	0.23	-0.9
143,947	+		MPMX19_05456	0.23	-1.2
143,947	+		MPMX19_05456	0.23	+0.0
143,948	-		MPMX19_05456	0.23	-2.2
143,948	-		MPMX19_05456	0.23	-1.6
143,948	-		MPMX19_05456	0.23	-1.5
143,948	-		MPMX19_05456	0.23	-1.2
143,948	-		MPMX19_05456	0.23	-2.6
143,948	-		MPMX19_05456	0.23	-1.2
143,948	-		MPMX19_05456	0.23	-0.2
143,948	-		MPMX19_05456	0.23	-1.4
143,948	-		MPMX19_05456	0.23	-0.7
143,948	-		MPMX19_05456	0.23	-0.1
143,948	-		MPMX19_05456	0.23	-1.8
143,948	-		MPMX19_05456	0.23	-0.5
143,948	-		MPMX19_05456	0.23	-1.0
143,948	-		MPMX19_05456	0.23	+0.0
143,948	-		MPMX19_05456	0.23	-1.1
143,948	-		MPMX19_05456	0.23	-0.8
143,948	-		MPMX19_05456	0.23	-1.6
143,948	-		MPMX19_05456	0.23	-0.4
143,948	-		MPMX19_05456	0.23	-0.7
143,948	-		MPMX19_05456	0.23	-1.6
143,948	-		MPMX19_05456	0.23	-1.2
143,948	-		MPMX19_05456	0.23	-1.8
143,948	-		MPMX19_05456	0.23	-2.6
143,948	-		MPMX19_05456	0.23	-0.7
143,948	-		MPMX19_05456	0.23	-1.2
143,948	-		MPMX19_05456	0.23	+0.0
143,948	-		MPMX19_05456	0.23	-1.1
143,948	-		MPMX19_05456	0.23	-1.4
143,948	-		MPMX19_05456	0.23	-0.5
143,948	-		MPMX19_05456	0.23	-0.2
143,948	-		MPMX19_05456	0.23	-0.8
143,948	-		MPMX19_05456	0.23	-1.4
143,948	-		MPMX19_05456	0.23	-1.4
143,948	-		MPMX19_05456	0.23	-0.2
143,948	-		MPMX19_05456	0.23	+0.8
143,948	-		MPMX19_05456	0.23	-1.5
143,948	-		MPMX19_05456	0.23	-0.4
143,948	-		MPMX19_05456	0.23	-1.6
143,948	-		MPMX19_05456	0.23	-1.6
143,948	-		MPMX19_05456	0.23	-2.1
143,948	-		MPMX19_05456	0.23	+0.2
143,948	-		MPMX19_05456	0.23	-1.7
143,948	-		MPMX19_05456	0.23	-0.2
143,948	-		MPMX19_05456	0.23	+0.0
143,948	-		MPMX19_05456	0.23	+1.1
143,948	-		MPMX19_05456	0.23	-1.8
143,948	-		MPMX19_05456	0.23	+1.3
143,948	-		MPMX19_05456	0.23	-0.9
143,948	-		MPMX19_05456	0.23	+0.4
143,948	-		MPMX19_05456	0.23	-1.4
143,948	-		MPMX19_05456	0.23	-1.2
143,948	-		MPMX19_05456	0.23	-0.7
143,948	-		MPMX19_05456	0.23	+0.3
143,948	-		MPMX19_05456	0.23	-2.4
144,073	+		MPMX19_05456	0.34	-0.7
144,073	+		MPMX19_05456	0.34	+0.8
144,073	+		MPMX19_05456	0.34	-0.1
144,073	+		MPMX19_05456	0.34	-1.2
144,074	-		MPMX19_05456	0.34	-2.1
144,074	-		MPMX19_05456	0.34	-0.8
144,074	-		MPMX19_05456	0.34	-0.4
144,074	-		MPMX19_05456	0.34	-1.4
144,074	-		MPMX19_05456	0.34	-0.6
144,074	-		MPMX19_05456	0.34	-1.1
144,222	+		MPMX19_05456	0.48	-1.7
144,222	+		MPMX19_05456	0.48	-0.7
144,222	+		MPMX19_05456	0.48	-0.6
144,222	+		MPMX19_05456	0.48	-1.8
144,223	-		MPMX19_05456	0.48	-0.8
144,223	-		MPMX19_05456	0.48	-0.2
144,223	-		MPMX19_05456	0.48	-1.6
144,223	-		MPMX19_05456	0.48	-0.2
144,232	+		MPMX19_05456	0.49	+0.0
144,232	+		MPMX19_05456	0.49	-2.2
144,232	+		MPMX19_05456	0.49	-1.1
144,232	+		MPMX19_05456	0.49	-0.1
144,232	+		MPMX19_05456	0.49	-1.8
144,232	+		MPMX19_05456	0.49	+0.4
144,233	-		MPMX19_05456	0.49	+0.8
144,233	-		MPMX19_05456	0.49	-0.9
144,233	-		MPMX19_05456	0.49	-0.8
144,233	-		MPMX19_05456	0.49	-1.1
144,358	+		MPMX19_05456	0.60	-1.8
144,358	+		MPMX19_05456	0.60	+0.8
144,388	+		MPMX19_05456	0.63	+0.0
144,388	+		MPMX19_05456	0.63	-0.1
144,388	+		MPMX19_05456	0.63	-0.4
144,388	+		MPMX19_05456	0.63	-0.8
144,389	-		MPMX19_05456	0.63	-1.9
144,389	-		MPMX19_05456	0.63	-2.7
144,389	-		MPMX19_05456	0.63	-1.6
144,389	-		MPMX19_05456	0.63	-0.2
144,389	-		MPMX19_05456	0.63	-0.8
144,389	-		MPMX19_05456	0.63	-2.8
144,490	+		MPMX19_05456	0.72	-2.2
144,490	+		MPMX19_05456	0.72	+0.5
144,490	+		MPMX19_05456	0.72	-0.2
144,490	+		MPMX19_05456	0.72	-1.2
144,490	+		MPMX19_05456	0.72	+0.8
144,490	+		MPMX19_05456	0.72	-1.1
144,491	-		MPMX19_05456	0.72	-2.7
144,491	-		MPMX19_05456	0.72	+0.2
144,491	-		MPMX19_05456	0.72	-0.6