Experiment: NF_with_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03219 and MPMX19_03220 are separated by 121 nucleotides MPMX19_03220 and MPMX19_03221 are separated by 8 nucleotides
MPMX19_03219: MPMX19_03219 - putative ABC transporter ATP-binding protein YheS, at 518,954 to 520,552
_03219
MPMX19_03220: MPMX19_03220 - hypothetical protein, at 520,674 to 521,312
_03220
MPMX19_03221: MPMX19_03221 - Adaptive-response sensory-kinase SasA, at 521,321 to 522,673
_03221
Position (kb) 520
521
522 Strain fitness (log2 ratio) -2
-1
0
1
2 at 520.842 kb on + strand, within MPMX19_03220 at 520.984 kb on - strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.369 kb on + strand at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.950 kb on - strand, within MPMX19_03221 at 521.950 kb on - strand, within MPMX19_03221
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with_fullN remove 520,842 + MPMX19_03220 0.26 -2.4 520,984 - MPMX19_03220 0.49 -0.9 521,010 + MPMX19_03220 0.53 -0.5 521,010 + MPMX19_03220 0.53 -1.5 521,010 + MPMX19_03220 0.53 -1.7 521,010 + MPMX19_03220 0.53 -0.9 521,010 + MPMX19_03220 0.53 -2.3 521,010 + MPMX19_03220 0.53 -0.0 521,022 + MPMX19_03220 0.54 +0.1 521,022 + MPMX19_03220 0.54 -1.6 521,022 + MPMX19_03220 0.54 +0.5 521,022 + MPMX19_03220 0.54 -2.5 521,022 + MPMX19_03220 0.54 -0.2 521,022 + MPMX19_03220 0.54 -2.2 521,022 + MPMX19_03220 0.54 +0.5 521,023 - MPMX19_03220 0.55 -0.9 521,023 - MPMX19_03220 0.55 -1.7 521,023 - MPMX19_03220 0.55 -0.4 521,023 - MPMX19_03220 0.55 -0.3 521,023 - MPMX19_03220 0.55 -1.2 521,023 - MPMX19_03220 0.55 -0.9 521,023 - MPMX19_03220 0.55 -0.5 521,023 - MPMX19_03220 0.55 -0.9 521,023 - MPMX19_03220 0.55 -1.2 521,023 - MPMX19_03220 0.55 -0.6 521,023 - MPMX19_03220 0.55 +0.2 521,369 + +0.2 521,470 - MPMX19_03221 0.11 +1.1 521,470 - MPMX19_03221 0.11 -1.2 521,470 - MPMX19_03221 0.11 -0.2 521,470 - MPMX19_03221 0.11 +0.8 521,704 - MPMX19_03221 0.28 -1.3 521,704 - MPMX19_03221 0.28 -1.2 521,704 - MPMX19_03221 0.28 -0.9 521,784 + MPMX19_03221 0.34 -0.1 521,784 + MPMX19_03221 0.34 -0.3 521,784 + MPMX19_03221 0.34 +0.5 521,784 + MPMX19_03221 0.34 +0.5 521,784 + MPMX19_03221 0.34 -2.2 521,784 + MPMX19_03221 0.34 -0.5 521,784 + MPMX19_03221 0.34 -0.1 521,785 - MPMX19_03221 0.34 -1.4 521,785 - MPMX19_03221 0.34 +0.1 521,785 - MPMX19_03221 0.34 -0.2 521,785 - MPMX19_03221 0.34 -0.3 521,785 - MPMX19_03221 0.34 -0.2 521,785 - MPMX19_03221 0.34 +1.1 521,949 + MPMX19_03221 0.46 +1.9 521,949 + MPMX19_03221 0.46 -0.0 521,949 + MPMX19_03221 0.46 +0.7 521,949 + MPMX19_03221 0.46 -0.5 521,950 - MPMX19_03221 0.46 -0.1 521,950 - MPMX19_03221 0.46 -0.6
Or see this region's nucleotide sequence