Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02267

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,384,442	+		MPMX19_02266	0.59	-1.9
2,384,442	+		MPMX19_02266	0.59	-0.3
2,384,443	-		MPMX19_02266	0.59	-2.4
2,384,492	+		MPMX19_02266	0.78	+1.1
2,384,492	+		MPMX19_02266	0.78	-1.0
2,384,492	+		MPMX19_02266	0.78	+0.2
2,384,492	+		MPMX19_02266	0.78	-0.4
2,384,492	+		MPMX19_02266	0.78	-1.3
2,384,493	-		MPMX19_02266	0.79	-1.4
2,384,493	-		MPMX19_02266	0.79	-1.2
2,384,493	-		MPMX19_02266	0.79	+0.8
2,384,493	-		MPMX19_02266	0.79	-0.6
2,384,493	-		MPMX19_02266	0.79	-0.4
2,384,493	-		MPMX19_02266	0.79	-1.2
2,384,493	-		MPMX19_02266	0.79	+1.4
2,384,493	-		MPMX19_02266	0.79	+0.4
2,384,544	+				+1.1
2,384,544	+				-0.3
2,384,544	+				-1.1
2,384,544	+				+1.2
2,384,544	+				-0.2
2,384,544	+				-1.2
2,384,544	+				-0.8
2,384,544	+				-2.0
2,384,544	+				-0.6
2,384,544	+				-0.2
2,384,544	+				-0.8
2,384,545	-				+0.4
2,384,545	-				-0.2
2,384,545	-				+1.0
2,384,545	-				-0.4
2,384,545	-				-2.0
2,384,545	-				-0.4
2,384,545	-				-0.3
2,384,545	-				-1.2
2,384,545	-				-0.8
2,384,545	-				+0.1
2,384,589	+				-0.2
2,384,589	+				-0.4
2,384,589	+				+0.8
2,384,589	+				+1.8
2,384,589	+				+0.8
2,384,590	-				-2.2
2,384,590	-				-0.2
2,384,590	-				+1.4
2,384,590	-				-0.8
2,384,590	-				-1.5
2,384,603	+				-1.0
2,384,603	+				-1.0
2,384,603	+				-0.4
2,384,603	+				-1.2
2,384,603	+				-0.2
2,384,603	+				+0.2
2,384,603	+				-0.2
2,384,603	+				-0.2
2,384,603	+				-1.1
2,384,603	+				-0.5
2,384,603	+				-0.2
2,384,603	+				-2.8
2,384,604	-				-1.8
2,384,604	-				-1.8
2,384,604	-				-1.2
2,384,604	-				-2.6
2,384,604	-				+1.0
2,384,604	-				-2.2
2,384,604	-				-0.8
2,384,691	+				-1.3
2,384,691	+				+0.8
2,384,691	+				-1.2
2,384,691	+				+0.2
2,384,691	+				-0.7
2,384,691	+				-1.4
2,384,691	+				-0.8
2,384,691	+				-2.0
2,384,691	+				-1.0
2,384,691	+				-1.5
2,384,691	+				-0.3
2,384,691	+				-1.2
2,384,691	+				-0.5
2,384,692	-				-1.5
2,384,692	-				+0.2
2,384,692	-				-0.8
2,384,692	-				+0.8
2,384,692	-				+0.4
2,384,692	-				-0.5
2,384,692	-				+0.8
2,384,710	+				-0.2
2,384,710	+				-0.2
2,384,710	+				-1.2
2,384,710	+				-0.2
2,384,710	+				-0.8
2,384,710	+				-0.2
2,384,710	+				+0.2
2,384,710	+				+0.2
2,384,710	+				-0.8
2,384,710	+				-0.5
2,384,710	+				+0.2
2,384,710	+				-0.2
2,384,710	+				+0.8
2,384,710	+				-0.8
2,384,710	+				-0.8
2,384,710	+				-0.4
2,384,710	+				+0.4
2,384,710	+				-1.8
2,384,710	+				-1.8
2,384,710	+				-1.5
2,384,710	+				-1.5
2,384,710	+				-0.2
2,384,710	+				+0.2
2,384,710	+				-1.0
2,384,710	+				+0.8
2,384,711	-				-1.5
2,384,711	-				-0.8
2,384,711	-				+0.8
2,384,711	-				+0.4
2,384,711	-				-1.5
2,384,711	-				+0.4
2,384,711	-				+0.2
2,384,711	-				+0.4
2,384,711	-				-0.2
2,384,711	-				-0.2
2,384,711	-				-0.9
2,384,711	-				-0.3
2,384,711	-				-1.6
2,384,711	-				+0.8
2,384,711	-				-0.8
2,384,711	-				-0.4
2,384,711	-				-1.2
2,384,711	-				-1.1
2,384,711	-				+0.2
2,384,711	-				+0.5
2,384,711	-				-0.8
2,384,719	+				-1.6
2,384,719	+				+0.4
2,384,719	+				-0.2
2,384,720	-				-0.5
2,384,720	-				-1.0
2,384,804	-				-1.0
2,384,804	-				+0.2
2,384,804	-				+0.8
2,384,881	+				-0.2
2,384,881	+				-0.8
2,384,881	+				-0.5
2,384,882	-				-2.0
2,385,001	+				-0.2
2,385,001	+				-0.6
2,385,001	+				-1.5
2,385,001	+				-1.5
2,385,001	+				-1.0
2,385,002	-				-0.8
2,385,002	-				-0.2
2,385,002	-				-0.1
2,385,002	-				-0.2
2,385,002	-				-0.2
2,385,002	-				-0.6
2,385,002	-				-1.2
2,385,011	+				+0.8
2,385,011	+				-1.2
2,385,011	+				-1.8
2,385,011	+				+0.8
2,385,011	+				-0.2
2,385,012	-				-2.0
2,385,012	-				+0.0
2,385,012	-				-1.2
2,385,012	-				-1.8
2,385,012	-				+0.8
2,385,012	-				-2.0
2,385,037	-				-1.2
2,385,037	-				-0.2
2,385,037	-				-1.0
2,385,105	+				-1.8
2,385,187	+				-0.0
2,385,187	+				-0.8
2,385,187	+				+0.8
2,385,187	+				+0.0
2,385,187	+				-1.3
2,385,187	+				-1.1
2,385,188	-				-0.5
2,385,188	-				-1.2
2,385,188	-				+0.4
2,385,188	-				+0.0
2,385,188	-				-1.3
2,385,188	-				+1.1
2,385,188	-				-1.2
2,385,188	-				-0.8
2,385,233	+				-2.0
2,385,233	+				-1.8
2,385,233	+				+0.8
2,385,233	+				-2.6
2,385,234	-				-0.8
2,385,234	-				-1.8
2,385,234	-				-0.7
2,385,234	-				+0.6
2,385,234	-				+0.5
2,385,234	-				-1.2
2,385,234	-				-1.3
2,385,234	-				-2.0
2,385,234	-				-1.2
2,385,234	-				-0.2
2,385,234	-				-0.7
2,385,237	+				-2.0
2,385,237	+				+0.2
2,385,237	+				-0.5
2,385,237	+				-1.1
2,385,237	+				-0.2
2,385,237	+				-1.3
2,385,237	+				-1.5
2,385,238	-				+0.8
2,385,238	-				-0.8
2,385,238	-				-1.1
2,385,238	-				-1.8
2,385,238	-				-1.2
2,385,238	-				-0.4
2,385,269	+				+0.0
2,385,269	+				-1.4
2,385,269	+				-0.8
2,385,269	+				-0.8
2,385,270	-				-0.5
2,385,270	-				+1.6
2,385,270	-				+2.1
2,385,270	-				-0.1
2,385,270	-				-0.2
2,385,270	-				-0.8
2,385,270	-				-0.2
2,385,271	+				-2.5
2,385,271	+				-1.1
2,385,271	+				-0.9
2,385,271	+				-0.8
2,385,271	+				-1.5
2,385,271	+				-2.4
2,385,271	+				-1.8
2,385,271	+				-0.8
2,385,271	+				-0.8
2,385,271	+				-0.2
2,385,271	+				-0.2
2,385,271	+				+0.2
2,385,271	+				-0.5
2,385,271	+				-0.8
2,385,271	+				-1.5
2,385,271	+				+0.1
2,385,271	+				+0.8
2,385,271	+				-1.2
2,385,271	+				-0.6
2,385,271	+				-0.5
2,385,271	+				-0.9
2,385,271	+				-2.2
2,385,271	+				-0.2
2,385,271	+				-1.4
2,385,271	+				-2.4
2,385,271	+				-0.8
2,385,271	+				+1.2
2,385,272	+				+0.1
2,385,272	-				-2.1
2,385,272	-				-1.0
2,385,272	-				-0.6
2,385,272	-				-0.0
2,385,272	-				-0.8
2,385,272	-				-1.0
2,385,272	-				-1.3
2,385,272	-				-1.2
2,385,272	-				-0.4
2,385,272	-				+0.1
2,385,272	-				+1.4
2,385,272	-				-1.6
2,385,272	-				-1.5
2,385,272	-				-0.6
2,385,272	-				+0.5
2,385,272	-				-1.2
2,385,272	-				-1.2
2,385,272	-				-0.3
2,385,272	-				-1.0
2,385,272	-				-0.4
2,385,279	+				-1.2
2,385,279	+				-0.9
2,385,279	+				-0.4
2,385,279	+				-1.2
2,385,279	+				-2.9
2,385,279	+				-0.4
2,385,279	+				-1.1
2,385,280	-				-0.8
2,385,280	-				-0.5
2,385,280	-				-0.4
2,385,280	-				-0.2
2,385,280	-				-1.3
2,385,280	-				-0.6
2,385,280	-				-2.0
2,385,280	-				-2.3
2,385,280	-				+0.6
2,385,280	-				-1.5
2,385,280	-				-1.2
2,385,288	+				+2.0
2,385,288	+				+0.1
2,385,288	+				+0.2
2,385,288	+				-2.2
2,385,288	+				-0.1
2,385,288	+				-2.0
2,385,288	+				-0.8
2,385,346	+				-1.4
2,385,347	-				-0.6
2,385,347	-				-0.3
2,385,347	-				-0.6
2,385,366	+				-1.8
2,385,366	+				-0.8
2,385,366	+				-0.5
2,385,367	-				-0.2
2,385,367	-				-1.0
2,385,381	+				-1.5
2,385,381	+				+0.1
2,385,381	+				-1.5
2,385,381	+				-0.8
2,385,381	+				+0.1
2,385,381	+				-0.5
2,385,381	+				-1.0
2,385,381	+				-0.8
2,385,381	+				-1.8
2,385,381	+				+0.5
2,385,381	+				-1.5
2,385,381	+				-0.8
2,385,381	+				-0.4
2,385,381	+				-1.8
2,385,381	+				-0.7
2,385,382	-				-1.4
2,385,382	-				-2.0
2,385,382	-				-0.1
2,385,382	-				-0.8
2,385,382	-				+0.3
2,385,382	-				+0.4
2,385,382	-				+1.1
2,385,382	-				-1.7
2,385,382	-				-1.0
2,385,382	-				-0.6
2,385,382	-				+0.8
2,385,382	-				-1.0
2,385,382	-				+1.1
2,385,402	+				-1.6
2,385,402	+				-0.5
2,385,402	+				-1.0
2,385,402	+				-0.2
2,385,402	+				-0.8
2,385,402	+				-0.5
2,385,402	+				-1.5
2,385,402	+				-0.5
2,385,403	-				-1.6
2,385,403	-				-1.5
2,385,403	-				-1.6
2,385,403	-				-2.2
2,385,403	-				-2.8
2,385,403	-				-0.9
2,385,403	-				-0.5
2,385,423	+				-0.8
2,385,423	+				+0.4
2,385,424	-				-2.4
2,386,026	+		MPMX19_02267	0.39	-2.2
2,386,094	-		MPMX19_02267	0.43	-1.8
2,386,097	+		MPMX19_02267	0.43	-2.2
2,386,097	+		MPMX19_02267	0.43	-2.2
2,386,098	-		MPMX19_02267	0.43	-2.0
2,386,098	-		MPMX19_02267	0.43	+0.3
2,386,417	-		MPMX19_02267	0.64	-0.2
2,386,497	+		MPMX19_02267	0.69	-0.2
2,386,816	-		MPMX19_02267	0.90	+0.2
2,386,960	+				-1.5
2,386,961	-				-1.8
2,386,961	-				-1.8
2,386,984	-				+0.2
2,386,984	-				-0.9
2,386,984	-				-2.6
2,386,984	-				-0.6
2,387,153	-		MPMX19_02268	0.10	-0.8
2,387,155	-		MPMX19_02268	0.11	-1.2
2,387,787	-		MPMX19_02268	0.49	-0.6