Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01918

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,002,273	+				-0.2
2,002,273	+				+0.6
2,002,273	+				+0.7
2,002,273	+				-0.2
2,002,273	+				-0.6
2,002,273	+				-0.6
2,002,273	+				-1.5
2,002,273	+				+0.4
2,002,273	+				+2.0
2,002,273	+				-0.6
2,002,273	+				-0.6
2,002,273	+				-1.0
2,002,273	+				-0.3
2,002,273	+				-0.4
2,002,273	+				-1.3
2,002,273	+				-1.8
2,002,273	+				-2.5
2,002,273	+				-1.0
2,002,273	+				-1.0
2,002,273	+				-2.0
2,002,273	+				-2.5
2,002,273	+				+1.0
2,002,273	+				-1.3
2,002,273	+				-0.5
2,002,273	+				-0.0
2,002,274	-				-1.2
2,002,274	-				+0.7
2,002,274	-				-1.3
2,002,274	-				-1.0
2,002,274	-				-0.5
2,002,274	-				-0.6
2,002,274	-				-0.8
2,002,274	-				-1.8
2,002,274	-				-1.2
2,002,274	-				-0.5
2,002,274	-				-0.6
2,002,274	-				-1.0
2,002,274	-				-1.0
2,002,274	-				-1.2
2,002,274	-				-1.8
2,002,274	-				-0.0
2,002,274	-				+0.4
2,002,274	-				-0.6
2,002,274	-				-0.6
2,002,274	-				-0.0
2,002,274	-				-1.8
2,002,274	-				+0.3
2,002,274	-				-1.6
2,002,274	-				-0.6
2,002,274	-				-0.6
2,002,274	-				-0.6
2,002,274	-				-0.6
2,002,274	-				-2.2
2,002,274	-				-2.2
2,002,274	-				-0.0
2,002,274	-				+0.2
2,002,274	-				-1.6
2,002,274	-				-1.7
2,002,277	+				-0.3
2,002,277	+				-0.6
2,002,277	+				-0.8
2,002,277	+				-0.6
2,002,277	+				-1.0
2,002,277	+				+0.4
2,002,277	+				-2.0
2,002,277	+				-2.2
2,002,278	-				-1.3
2,002,278	-				-1.0
2,002,278	-				-0.7
2,002,278	-				+0.3
2,002,278	-				+1.6
2,002,278	-				+1.0
2,002,278	-				-2.3
2,002,278	-				-0.0
2,002,278	-				-1.2
2,002,278	-				-1.3
2,002,278	-				-2.3
2,002,316	+				+0.7
2,002,316	+				-0.6
2,002,316	+				-0.6
2,002,317	-				+0.4
2,002,317	-				-2.0
2,002,375	+				+1.2
2,002,376	-				-2.2
2,002,376	-				-0.2
2,002,376	-				-1.0
2,002,376	-				+1.4
2,002,819	+		MPMX19_01917	0.87	-0.9
2,002,819	+		MPMX19_01917	0.87	-0.0
2,002,819	+		MPMX19_01917	0.87	-0.0
2,002,820	-		MPMX19_01917	0.87	+0.3
2,002,820	-		MPMX19_01917	0.87	+0.4
2,002,820	-		MPMX19_01917	0.87	-1.0
2,002,820	-		MPMX19_01917	0.87	+0.2
2,002,820	-		MPMX19_01917	0.87	-0.6
2,002,899	+				-1.1
2,002,944	+				-0.9
2,002,944	+				+1.0
2,002,945	-				-1.6
2,002,945	-				-0.6
2,003,006	+				-1.0
2,003,006	+				-1.3
2,003,006	+				+0.4
2,003,007	-				+0.5
2,003,007	-				-0.6
2,003,053	+				-1.3
2,003,054	-				-0.8
2,003,198	-		MPMX19_01918	0.63	-1.7
2,003,198	-		MPMX19_01918	0.63	-1.3
2,003,198	-		MPMX19_01918	0.63	-0.3
2,003,217	+		MPMX19_01918	0.88	-1.0
2,003,383	+				-0.2
2,003,383	+				-0.0
2,003,383	+				-0.0
2,003,383	+				-0.0
2,003,383	+				-2.0
2,003,383	+				-0.8
2,003,383	+				-1.3
2,003,383	+				-0.0
2,003,383	+				+0.3
2,003,383	+				-0.3
2,003,383	+				-0.6
2,003,383	+				-0.4
2,003,383	+				-0.1
2,003,383	+				+0.3
2,003,383	+				+0.4
2,003,383	+				-0.6
2,003,383	+				-1.3
2,003,384	-				+0.4
2,003,384	-				-0.3
2,003,384	-				-1.2
2,003,384	-				-1.6
2,003,384	-				-1.1
2,003,384	-				-1.6
2,003,384	-				+1.0
2,003,384	-				+0.3
2,003,384	-				-1.7
2,003,384	-				-0.6
2,003,384	-				-1.6
2,003,384	-				-1.3
2,003,384	-				-0.6
2,003,384	-				-0.4
2,003,384	-				-0.2
2,003,387	+				+1.4
2,003,387	+				-1.2
2,003,387	+				+0.6
2,003,388	-				-0.0
2,003,388	-				-0.5
2,003,388	-				-1.1
2,003,472	+				-1.2
2,003,473	-				-0.0
2,003,473	-				-0.7
2,003,487	-				-0.7
2,003,487	-				+0.2
2,003,487	-				-1.3
2,003,487	-				-0.3
2,003,507	+				+0.3
2,003,507	+				+0.3
2,003,507	+				-2.2
2,003,507	+				-0.7
2,003,507	+				+0.9
2,003,507	+				-0.3
2,003,508	-				-1.1
2,003,508	-				+0.4
2,003,508	-				-2.2
2,003,508	-				-0.3
2,003,516	+				-2.3
2,003,517	-				-0.3
2,003,819	+		MPMX19_01920	0.35	-0.0
2,003,819	+		MPMX19_01920	0.35	-1.0
2,003,819	+		MPMX19_01920	0.35	+0.2
2,003,819	+		MPMX19_01920	0.35	-0.6
2,003,819	+		MPMX19_01920	0.35	-1.0
2,003,819	+		MPMX19_01920	0.35	+0.2
2,003,819	+		MPMX19_01920	0.35	-0.4
2,003,819	+		MPMX19_01920	0.35	+0.1
2,003,819	+		MPMX19_01920	0.35	+0.5
2,003,819	+		MPMX19_01920	0.35	-0.9
2,003,819	+		MPMX19_01920	0.35	-0.4
2,003,819	+		MPMX19_01920	0.35	-0.0
2,003,819	+		MPMX19_01920	0.35	+0.1
2,003,819	+		MPMX19_01920	0.35	-1.6
2,003,819	+		MPMX19_01920	0.35	-0.6
2,003,820	-		MPMX19_01920	0.36	+0.8
2,003,820	-		MPMX19_01920	0.36	-0.4
2,003,820	-		MPMX19_01920	0.36	+0.3
2,003,820	-		MPMX19_01920	0.36	-0.8
2,003,820	-		MPMX19_01920	0.36	-1.6
2,003,820	-		MPMX19_01920	0.36	+0.3
2,003,820	-		MPMX19_01920	0.36	+0.0
2,003,820	-		MPMX19_01920	0.36	-0.0
2,003,820	-		MPMX19_01920	0.36	+0.4
2,003,820	-		MPMX19_01920	0.36	-0.0
2,003,820	-		MPMX19_01920	0.36	-0.0
2,003,915	+		MPMX19_01920	0.46	+1.0
2,003,915	+		MPMX19_01920	0.46	-0.9
2,003,915	+		MPMX19_01920	0.46	+0.5
2,003,915	+		MPMX19_01920	0.46	-0.6
2,003,915	+		MPMX19_01920	0.46	-0.0
2,003,915	+		MPMX19_01920	0.46	+0.3
2,003,915	+		MPMX19_01920	0.46	+0.4
2,003,916	-		MPMX19_01920	0.46	-0.5
2,003,916	-		MPMX19_01920	0.46	-1.2
2,003,916	-		MPMX19_01920	0.46	-2.2
2,003,916	-		MPMX19_01920	0.46	-1.5
2,003,916	-		MPMX19_01920	0.46	+0.3
2,003,916	-		MPMX19_01920	0.46	+0.7
2,003,916	-		MPMX19_01920	0.46	-1.1
2,003,916	-		MPMX19_01920	0.46	+0.7
2,003,916	-		MPMX19_01920	0.46	-1.3
2,003,916	-		MPMX19_01920	0.46	-0.3
2,004,068	+		MPMX19_01920	0.62	+0.6
2,004,068	+		MPMX19_01920	0.62	-0.3
2,004,068	+		MPMX19_01920	0.62	+1.0
2,004,068	+		MPMX19_01920	0.62	-1.0
2,004,069	-		MPMX19_01920	0.62	-2.3
2,004,069	-		MPMX19_01920	0.62	+1.4
2,004,069	-		MPMX19_01920	0.62	+0.8
2,004,069	-		MPMX19_01920	0.62	+1.0
2,004,069	-		MPMX19_01920	0.62	-1.0
2,004,069	-		MPMX19_01920	0.62	-0.0
2,004,069	-		MPMX19_01920	0.62	-0.0
2,004,069	-		MPMX19_01920	0.62	-0.7
2,004,069	-		MPMX19_01920	0.62	-1.0
2,004,069	-		MPMX19_01920	0.62	-0.7
2,004,069	-		MPMX19_01920	0.62	-0.6
2,004,069	-		MPMX19_01920	0.62	-1.6
2,004,161	+		MPMX19_01920	0.72	+0.5
2,004,161	+		MPMX19_01920	0.72	-0.2
2,004,161	+		MPMX19_01920	0.72	-0.2
2,004,161	+		MPMX19_01920	0.72	+0.4
2,004,161	+		MPMX19_01920	0.72	+0.1
2,004,161	+		MPMX19_01920	0.72	-0.8
2,004,161	+		MPMX19_01920	0.72	-0.5
2,004,162	-		MPMX19_01920	0.72	-0.0
2,004,162	-		MPMX19_01920	0.72	-0.4
2,004,162	-		MPMX19_01920	0.72	-1.6
2,004,162	-		MPMX19_01920	0.72	-1.3