Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01727

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,818,296	+		MPMX19_01726	0.46	-1.5
1,818,296	+		MPMX19_01726	0.46	-1.4
1,818,296	+		MPMX19_01726	0.46	-1.5
1,818,296	+		MPMX19_01726	0.46	-1.3
1,818,296	+		MPMX19_01726	0.46	+0.5
1,818,296	+		MPMX19_01726	0.46	+0.6
1,818,296	+		MPMX19_01726	0.46	-1.7
1,818,296	+		MPMX19_01726	0.46	-0.7
1,818,296	+		MPMX19_01726	0.46	+0.6
1,818,296	+		MPMX19_01726	0.46	-2.3
1,818,296	+		MPMX19_01726	0.46	+0.7
1,818,296	+		MPMX19_01726	0.46	-0.9
1,818,296	+		MPMX19_01726	0.46	-0.3
1,818,296	+		MPMX19_01726	0.46	+1.1
1,818,297	-		MPMX19_01726	0.46	-1.3
1,818,297	-		MPMX19_01726	0.46	-0.6
1,818,297	-		MPMX19_01726	0.46	-0.5
1,818,297	-		MPMX19_01726	0.46	-2.6
1,818,297	-		MPMX19_01726	0.46	-0.5
1,818,297	-		MPMX19_01726	0.46	-1.0
1,818,297	-		MPMX19_01726	0.46	+0.6
1,818,297	-		MPMX19_01726	0.46	+0.6
1,818,297	-		MPMX19_01726	0.46	+1.6
1,818,297	-		MPMX19_01726	0.46	-1.9
1,818,297	-		MPMX19_01726	0.46	-1.6
1,818,297	-		MPMX19_01726	0.46	-0.4
1,818,297	-		MPMX19_01726	0.46	-0.9
1,818,523	+		MPMX19_01726	0.71	-0.5
1,818,523	+		MPMX19_01726	0.71	+0.4
1,818,523	+		MPMX19_01726	0.71	-1.3
1,818,523	+		MPMX19_01726	0.71	-0.5
1,818,523	+		MPMX19_01726	0.71	-0.9
1,818,524	-		MPMX19_01726	0.71	-1.7
1,818,524	-		MPMX19_01726	0.71	-1.5
1,818,524	-		MPMX19_01726	0.71	-1.7
1,818,524	-		MPMX19_01726	0.71	-0.5
1,818,524	-		MPMX19_01726	0.71	-0.7
1,818,524	-		MPMX19_01726	0.71	+0.1
1,818,524	-		MPMX19_01726	0.71	-1.5
1,818,524	-		MPMX19_01726	0.71	-0.7
1,818,625	+		MPMX19_01726	0.82	-1.3
1,818,625	+		MPMX19_01726	0.82	-2.3
1,818,625	+		MPMX19_01726	0.82	+0.3
1,818,625	+		MPMX19_01726	0.82	-0.5
1,818,625	+		MPMX19_01726	0.82	+1.1
1,818,625	+		MPMX19_01726	0.82	+1.1
1,818,625	+		MPMX19_01726	0.82	-0.3
1,818,626	-		MPMX19_01726	0.83	-0.4
1,818,626	-		MPMX19_01726	0.83	-0.5
1,818,626	-		MPMX19_01726	0.83	-2.4
1,818,626	-		MPMX19_01726	0.83	-1.2
1,818,626	-		MPMX19_01726	0.83	-0.5
1,818,626	-		MPMX19_01726	0.83	-0.2
1,818,713	+				+1.6
1,818,714	-				-1.5
1,818,845	-				-1.5
1,818,919	+				-0.3
1,818,920	-				+0.5
1,818,920	-				-1.9
1,818,945	+				-0.9
1,818,945	+				-0.2
1,818,945	+				-0.4
1,818,945	+				+1.1
1,818,945	+				-1.9
1,818,945	+				-0.1
1,818,945	+				-0.5
1,818,945	+				-0.9
1,818,946	-				-0.7
1,818,946	-				-0.5
1,818,946	-				-0.2
1,818,960	+				-0.7
1,818,960	+				-2.1
1,818,961	-				+0.1
1,818,961	-				-0.1
1,818,967	+				+0.5
1,818,967	+				-0.9
1,818,967	+				-0.3
1,818,967	+				-1.5
1,818,968	-				-1.4
1,818,968	-				-0.3
1,819,083	+				-1.6
1,819,084	-				-0.5
1,819,092	+				-1.4
1,819,176	-				-0.1
1,819,176	-				-0.9
1,819,185	-				-0.4
1,819,275	+				+0.3
1,819,275	+				-1.5
1,819,282	+				-1.2
1,819,283	-				+0.1
1,819,283	-				-0.3
1,819,389	+		MPMX19_01727	0.20	-0.6
1,819,390	-		MPMX19_01727	0.20	+1.1
1,819,390	-		MPMX19_01727	0.20	+0.1
1,819,632	+		MPMX19_01727	0.62	-0.9
1,819,633	-		MPMX19_01727	0.62	+0.1
1,819,633	-		MPMX19_01727	0.62	+0.3
1,819,633	-		MPMX19_01727	0.62	-1.7
1,819,782	+		MPMX19_01727	0.88	-2.3
1,819,782	+		MPMX19_01727	0.88	-0.9
1,819,783	-		MPMX19_01727	0.88	-0.7
1,819,783	-		MPMX19_01727	0.88	+0.1
1,819,783	-		MPMX19_01727	0.88	-0.8
1,819,783	-		MPMX19_01727	0.88	-0.5
1,819,798	-				+0.5
1,819,798	-				+0.8
1,819,836	+				-0.1
1,819,836	+				-1.7
1,819,836	+				-3.1
1,819,837	-				+0.7
1,819,837	-				-0.5
1,819,837	-				-0.1
1,819,837	-				-0.8
1,819,837	-				-0.5
1,819,837	-				-0.7
1,819,837	-				+0.1
1,819,837	-				+0.2
1,819,837	-				+0.2
1,819,837	-				-2.3
1,819,837	-				-0.7
1,820,094	+		MPMX19_01728	0.87	-1.9
1,820,094	+		MPMX19_01728	0.87	-0.1
1,820,094	+		MPMX19_01728	0.87	-0.9
1,820,094	+		MPMX19_01728	0.87	-0.3
1,820,094	+		MPMX19_01728	0.87	-1.3
1,820,094	+		MPMX19_01728	0.87	-1.1
1,820,094	+		MPMX19_01728	0.87	-1.7
1,820,095	-		MPMX19_01728	0.88	-1.7
1,820,095	-		MPMX19_01728	0.88	-0.6
1,820,095	-		MPMX19_01728	0.88	-1.3
1,820,095	-		MPMX19_01728	0.88	-0.6
1,820,095	-		MPMX19_01728	0.88	+0.1
1,820,095	-		MPMX19_01728	0.88	+0.5
1,820,095	-		MPMX19_01728	0.88	-1.7
1,820,095	-		MPMX19_01728	0.88	-0.4
1,820,095	-		MPMX19_01728	0.88	+0.3
1,820,095	-		MPMX19_01728	0.88	+0.6
1,820,095	-		MPMX19_01728	0.88	-0.5
1,820,095	-		MPMX19_01728	0.88	+0.3
1,820,095	-		MPMX19_01728	0.88	+1.3
1,820,095	-		MPMX19_01728	0.88	-0.9
1,820,095	-		MPMX19_01728	0.88	-1.5
1,820,095	-		MPMX19_01728	0.88	+0.6
1,820,342	+		MPMX19_01729	0.40	-3.2
1,820,342	+		MPMX19_01729	0.40	-1.9
1,820,342	+		MPMX19_01729	0.40	-0.8
1,820,343	-		MPMX19_01729	0.40	-0.3
1,820,343	-		MPMX19_01729	0.40	-0.4
1,820,343	-		MPMX19_01729	0.40	-1.8
1,820,343	-		MPMX19_01729	0.40	-0.8
1,820,343	-		MPMX19_01729	0.40	-0.9
1,820,343	-		MPMX19_01729	0.40	-1.5
1,820,515	-		MPMX19_01729	0.82	-0.9
1,820,619	+				-1.5
1,820,632	+				-0.5
1,820,632	+				-0.8
1,820,633	-				-1.3
1,820,633	-				-1.5
1,820,633	-				-0.9
1,820,641	+				+0.6
1,820,641	+				-1.5
1,820,641	+				-1.8
1,820,641	+				-0.9
1,820,641	+				-0.4
1,820,641	+				+0.6
1,820,641	+				-0.8
1,820,641	+				-1.3
1,820,641	+				-1.4
1,820,641	+				+0.8
1,820,641	+				-1.3
1,820,642	-				+0.2
1,820,642	-				+0.1
1,820,642	-				+0.2
1,820,642	-				+0.5
1,820,642	-				+1.7
1,820,642	-				+0.3
1,820,642	-				+1.6
1,820,642	-				+0.1
1,820,642	-				-0.9
1,820,642	-				-0.9
1,820,642	-				+1.6
1,820,642	-				-0.5
1,820,643	+				+2.1
1,820,643	+				-0.2
1,820,643	+				-1.6
1,820,643	+				-0.9
1,820,643	+				-2.1
1,820,643	+				-0.9
1,820,643	+				-0.5
1,820,643	+				+1.1
1,820,643	+				-0.5
1,820,643	+				-0.1
1,820,643	+				-1.5
1,820,643	+				-0.1
1,820,643	+				+0.2
1,820,643	+				-0.0
1,820,643	+				-1.7
1,820,643	+				-0.9
1,820,643	+				+0.1
1,820,643	+				-0.8
1,820,643	+				+0.3
1,820,643	+				-1.5
1,820,643	+				-0.9
1,820,643	+				-0.8
1,820,643	+				-1.4
1,820,643	+				-1.8
1,820,643	+				-0.3
1,820,643	+				+1.5
1,820,643	+				+0.1
1,820,643	+				+1.4
1,820,643	+				-1.4
1,820,644	-				-1.6
1,820,644	-				-1.5
1,820,644	-				+0.1
1,820,644	-				-0.5
1,820,644	-				+0.6
1,820,644	-				+0.5
1,820,644	-				-1.3
1,820,644	-				-0.1
1,820,644	-				-0.9
1,820,644	-				+0.1
1,820,644	-				+0.6
1,820,644	-				-1.3
1,820,644	-				-1.4
1,820,644	-				+0.5
1,820,644	-				-1.5
1,820,644	-				-1.6
1,820,644	-				+0.1
1,820,644	-				+0.1
1,820,644	-				+0.6
1,820,644	-				-0.3
1,820,644	-				-0.3
1,820,644	-				+3.1
1,820,644	-				+2.1
1,820,644	-				-1.1
1,820,644	-				-0.9
1,820,644	-				-0.5
1,820,644	-				+1.1
1,820,644	-				+0.2