Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01504

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,573,419	+		MPMX19_01502	0.87	-2.1
1,573,419	+		MPMX19_01502	0.87	-0.5
1,573,419	+		MPMX19_01502	0.87	-1.9
1,573,419	+		MPMX19_01502	0.87	-1.7
1,573,419	+		MPMX19_01502	0.87	-2.3
1,573,419	+		MPMX19_01502	0.87	-0.2
1,573,419	+		MPMX19_01502	0.87	-0.9
1,573,419	+		MPMX19_01502	0.87	-0.7
1,573,420	-		MPMX19_01502	0.87	-1.3
1,573,420	-		MPMX19_01502	0.87	-1.3
1,573,420	-		MPMX19_01502	0.87	-0.8
1,573,420	-		MPMX19_01502	0.87	-1.7
1,573,420	-		MPMX19_01502	0.87	-1.3
1,573,420	-		MPMX19_01502	0.87	+1.1
1,573,576	+				-0.4
1,573,628	+				+0.7
1,573,628	+				-1.1
1,573,628	+				-0.3
1,573,628	+				+0.7
1,573,628	+				-2.5
1,573,628	+				-1.2
1,573,628	+				-1.5
1,573,628	+				-0.8
1,573,628	+				-0.8
1,573,629	-				-0.8
1,573,647	+				-0.5
1,573,687	+				+0.3
1,573,687	+				-0.3
1,573,688	-				-0.4
1,573,688	-				-1.8
1,573,705	+				-1.3
1,573,724	+				-0.7
1,573,770	+				-0.7
1,573,781	+				-1.1
1,573,782	-				-1.0
1,573,850	-				+0.1
1,573,891	+				+0.3
1,573,892	-				+0.3
1,573,892	-				-1.3
1,573,892	-				+0.3
1,573,897	+				+0.2
1,573,897	+				+0.1
1,573,898	-				-0.3
1,573,898	-				-0.5
1,573,906	+				-0.9
1,573,907	-				+0.5
1,573,907	-				-1.5
1,573,908	+				+0.1
1,573,908	+				-0.2
1,573,908	+				-1.5
1,573,908	+				-1.3
1,573,908	+				+3.1
1,573,908	+				-1.7
1,573,909	-				-1.5
1,573,909	-				-1.1
1,573,909	-				+0.6
1,573,909	-				-0.5
1,573,909	-				-1.5
1,573,909	-				-0.5
1,573,937	+				+0.1
1,573,937	+				-1.7
1,573,937	+				+3.1
1,573,937	+				-0.9
1,573,938	-				-0.5
1,573,938	-				+1.1
1,573,938	-				+0.2
1,574,198	+		MPMX19_01503	0.87	+1.1
1,574,198	+		MPMX19_01503	0.87	+0.1
1,574,198	+		MPMX19_01503	0.87	-1.7
1,574,199	-		MPMX19_01503	0.88	+0.1
1,574,199	-		MPMX19_01503	0.88	-0.4
1,574,199	-		MPMX19_01503	0.88	-0.6
1,574,199	-		MPMX19_01503	0.88	+0.5
1,574,234	+				+0.7
1,574,235	-				+0.1
1,574,235	-				-1.1
1,574,246	-				-0.2
1,574,263	-				+0.7
1,574,263	-				+1.1
1,574,405	+		MPMX19_01504	0.13	-1.1
1,574,405	+		MPMX19_01504	0.13	-1.1
1,574,405	+		MPMX19_01504	0.13	-1.7
1,574,405	+		MPMX19_01504	0.13	-0.5
1,574,405	+		MPMX19_01504	0.13	-0.9
1,574,405	+		MPMX19_01504	0.13	-1.5
1,574,405	+		MPMX19_01504	0.13	+0.1
1,574,405	+		MPMX19_01504	0.13	-0.6
1,574,405	+		MPMX19_01504	0.13	-2.6
1,574,405	+		MPMX19_01504	0.13	+0.5
1,574,405	+		MPMX19_01504	0.13	-1.3
1,574,405	+		MPMX19_01504	0.13	-0.7
1,574,406	-		MPMX19_01504	0.13	-0.3
1,574,406	-		MPMX19_01504	0.13	-0.5
1,574,406	-		MPMX19_01504	0.13	+0.1
1,574,406	-		MPMX19_01504	0.13	+0.1
1,574,406	-		MPMX19_01504	0.13	-0.7
1,574,406	-		MPMX19_01504	0.13	-0.0
1,574,406	-		MPMX19_01504	0.13	+0.5
1,574,406	-		MPMX19_01504	0.13	-0.3
1,574,406	-		MPMX19_01504	0.13	-0.8
1,574,535	+		MPMX19_01504	0.27	-2.6
1,574,536	-		MPMX19_01504	0.28	+0.1
1,574,536	-		MPMX19_01504	0.28	+1.1
1,574,536	-		MPMX19_01504	0.28	+0.7
1,574,536	-		MPMX19_01504	0.28	-0.9
1,574,562	+		MPMX19_01504	0.31	+0.1
1,574,563	-		MPMX19_01504	0.31	-1.9
1,574,563	-		MPMX19_01504	0.31	+0.2
1,574,563	-		MPMX19_01504	0.31	+0.5
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	-1.5
1,574,691	+		MPMX19_01504	0.45	-0.4
1,574,691	+		MPMX19_01504	0.45	-0.6
1,574,691	+		MPMX19_01504	0.45	+1.3
1,574,691	+		MPMX19_01504	0.45	+0.5
1,574,691	+		MPMX19_01504	0.45	-0.2
1,574,691	+		MPMX19_01504	0.45	-0.7
1,574,691	+		MPMX19_01504	0.45	-0.5
1,574,691	+		MPMX19_01504	0.45	+0.7
1,574,691	+		MPMX19_01504	0.45	-0.3
1,574,691	+		MPMX19_01504	0.45	-0.2
1,574,691	+		MPMX19_01504	0.45	+0.5
1,574,691	+		MPMX19_01504	0.45	+0.1
1,574,691	+		MPMX19_01504	0.45	+1.1
1,574,691	+		MPMX19_01504	0.45	-0.9
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	-1.5
1,574,691	+		MPMX19_01504	0.45	-0.5
1,574,691	+		MPMX19_01504	0.45	-1.1
1,574,691	+		MPMX19_01504	0.45	+0.5
1,574,691	+		MPMX19_01504	0.45	-0.5
1,574,691	+		MPMX19_01504	0.45	-0.7
1,574,691	+		MPMX19_01504	0.45	+0.8
1,574,691	+		MPMX19_01504	0.45	-1.4
1,574,691	+		MPMX19_01504	0.45	-0.3
1,574,691	+		MPMX19_01504	0.45	+1.2
1,574,691	+		MPMX19_01504	0.45	-0.8
1,574,691	+		MPMX19_01504	0.45	+1.1
1,574,691	+		MPMX19_01504	0.45	-0.9
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	-1.3
1,574,691	+		MPMX19_01504	0.45	-0.4
1,574,691	+		MPMX19_01504	0.45	-2.3
1,574,691	+		MPMX19_01504	0.45	+1.1
1,574,691	+		MPMX19_01504	0.45	+1.7
1,574,691	+		MPMX19_01504	0.45	-1.0
1,574,692	-		MPMX19_01504	0.45	-0.8
1,574,692	-		MPMX19_01504	0.45	-0.6
1,574,692	-		MPMX19_01504	0.45	-0.9
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	-0.9
1,574,692	-		MPMX19_01504	0.45	-0.4
1,574,692	-		MPMX19_01504	0.45	-0.7
1,574,692	-		MPMX19_01504	0.45	+0.2
1,574,692	-		MPMX19_01504	0.45	+0.1
1,574,692	-		MPMX19_01504	0.45	-0.8
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	-1.7
1,574,692	-		MPMX19_01504	0.45	+0.7
1,574,692	-		MPMX19_01504	0.45	+0.4
1,574,692	-		MPMX19_01504	0.45	-0.5
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	+0.1
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	-1.3
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	+1.9
1,574,692	-		MPMX19_01504	0.45	-0.5
1,574,692	-		MPMX19_01504	0.45	-1.1
1,574,692	-		MPMX19_01504	0.45	-1.6
1,574,692	-		MPMX19_01504	0.45	-0.9
1,574,692	-		MPMX19_01504	0.45	-1.2
1,574,692	-		MPMX19_01504	0.45	-1.2
1,574,692	-		MPMX19_01504	0.45	-0.1
1,574,692	-		MPMX19_01504	0.45	-0.2
1,574,692	-		MPMX19_01504	0.45	-0.7
1,574,692	-		MPMX19_01504	0.45	-0.3
1,574,692	-		MPMX19_01504	0.45	-1.5
1,574,692	-		MPMX19_01504	0.45	-1.5
1,574,692	-		MPMX19_01504	0.45	-0.7
1,574,692	-		MPMX19_01504	0.45	+0.8
1,574,692	-		MPMX19_01504	0.45	+2.7
1,574,692	-		MPMX19_01504	0.45	-1.2
1,574,692	-		MPMX19_01504	0.45	-1.4
1,574,692	-		MPMX19_01504	0.45	-0.6
1,574,692	-		MPMX19_01504	0.45	-1.5
1,574,692	-		MPMX19_01504	0.45	+0.1
1,574,692	-		MPMX19_01504	0.45	+1.1
1,575,120	+				+0.1
1,575,120	+				+1.1
1,575,120	+				-1.1
1,575,120	+				+0.3
1,575,120	+				-1.9
1,575,120	+				+1.7
1,575,120	+				+2.7
1,575,120	+				-0.9
1,575,120	+				+0.3
1,575,120	+				-1.3
1,575,120	+				+0.7
1,575,120	+				+1.1
1,575,120	+				-0.5
1,575,120	+				-0.7
1,575,120	+				+0.4
1,575,120	+				+0.3
1,575,120	+				+2.4
1,575,121	-				-0.7
1,575,121	-				+0.5
1,575,121	-				+0.7
1,575,121	-				-2.8
1,575,121	-				-1.9
1,575,121	-				-2.8
1,575,121	-				-0.7
1,575,121	-				-0.4
1,575,121	-				+0.6
1,575,121	-				+1.1
1,575,121	-				-0.2
1,575,140	+				+0.3
1,575,141	-				-0.4
1,575,141	-				+1.1
1,575,211	+				-0.1
1,575,211	+				-0.7
1,575,211	+				+1.1
1,575,212	-				-1.5
1,575,212	-				-0.7
1,575,212	-				+0.5
1,575,255	+				+0.3
1,575,255	+				-0.7
1,575,255	+				-0.6
1,575,255	+				-0.7
1,575,255	+				+1.1
1,575,255	+				+1.1
1,575,255	+				+0.1
1,575,255	+				-1.5
1,575,255	+				-1.7
1,575,256	-				-0.9
1,575,256	-				-1.7
1,575,256	-				-0.7
1,575,256	-				-0.2
1,575,256	-				+0.5
1,575,612	+		MPMX19_01505	0.52	-0.5
1,575,612	+		MPMX19_01505	0.52	-1.3
1,575,612	+		MPMX19_01505	0.52	-0.5
1,575,613	-		MPMX19_01505	0.52	+2.1
1,575,613	-		MPMX19_01505	0.52	-0.3
1,575,613	-		MPMX19_01505	0.52	-0.0
1,575,613	-		MPMX19_01505	0.52	-0.9
1,575,613	-		MPMX19_01505	0.52	-1.3
1,575,613	-		MPMX19_01505	0.52	-0.7
1,575,613	-		MPMX19_01505	0.52	-1.7
1,575,780	+		MPMX19_01505	0.77	+0.5
1,575,780	+		MPMX19_01505	0.77	+0.1
1,575,780	+		MPMX19_01505	0.77	-0.3
1,575,780	+		MPMX19_01505	0.77	-2.4
1,575,780	+		MPMX19_01505	0.77	-1.5
1,575,780	+		MPMX19_01505	0.77	+0.5
1,575,781	-		MPMX19_01505	0.77	+1.1
1,575,781	-		MPMX19_01505	0.77	-0.3
1,575,781	-		MPMX19_01505	0.77	-0.5
1,575,853	+		MPMX19_01505	0.88	-0.5
1,575,853	+		MPMX19_01505	0.88	-1.0
1,575,853	+		MPMX19_01505	0.88	-0.6
1,575,853	+		MPMX19_01505	0.88	-0.3
1,575,854	-		MPMX19_01505	0.88	+0.7
1,575,854	-		MPMX19_01505	0.88	+0.5
1,575,854	-		MPMX19_01505	0.88	-0.3
1,575,854	-		MPMX19_01505	0.88	+0.1
1,575,864	+		MPMX19_01505	0.89	-0.6
1,575,864	+		MPMX19_01505	0.89	+0.3
1,575,864	+		MPMX19_01505	0.89	+0.3
1,575,864	+		MPMX19_01505	0.89	-1.3
1,575,864	+		MPMX19_01505	0.89	+0.1
1,575,865	-		MPMX19_01505	0.89	-1.3
1,575,865	-		MPMX19_01505	0.89	+1.1
1,575,865	-		MPMX19_01505	0.89	-0.5
1,575,865	-		MPMX19_01505	0.89	+0.3
1,575,865	-		MPMX19_01505	0.89	-1.7
1,575,865	-		MPMX19_01505	0.89	-1.7
1,575,865	-		MPMX19_01505	0.89	-0.5
1,575,865	-		MPMX19_01505	0.89	-2.1
1,575,865	-		MPMX19_01505	0.89	-0.3
1,575,865	-		MPMX19_01505	0.89	-1.0
1,575,998	+				+0.7
1,575,998	+				+1.3
1,575,998	+				+0.7
1,575,998	+				-1.3
1,575,999	-				+1.5
1,575,999	-				-1.7
1,575,999	-				-0.3
1,575,999	-				-0.4
1,576,015	+				-0.3
1,576,015	+				-2.3
1,576,015	+				-1.5
1,576,015	+				-2.5
1,576,015	+				+1.3
1,576,015	+				-0.3
1,576,015	+				+0.9
1,576,015	+				+0.7
1,576,015	+				-0.9
1,576,015	+				-0.7
1,576,015	+				+1.1
1,576,015	+				-0.5
1,576,015	+				-2.3
1,576,016	-				-0.7
1,576,016	-				-1.3
1,576,016	-				-0.9
1,576,016	-				+1.2
1,576,016	-				+2.4
1,576,016	-				+1.7
1,576,016	-				+0.1
1,576,016	-				-1.1
1,576,016	-				-0.4
1,576,016	-				-1.3
1,576,016	-				-1.7
1,576,016	-				-1.4
1,576,025	+				+0.1
1,576,025	+				+0.5
1,576,026	-				+0.1
1,576,026	-				-1.9
1,576,069	+				+0.7
1,576,069	+				-1.3
1,576,069	+				-0.2
1,576,069	+				+0.5
1,576,069	+				-0.5
1,576,069	+				+0.8
1,576,069	+				+0.1
1,576,069	+				-0.9
1,576,069	+				-1.7
1,576,069	+				-1.3
1,576,069	+				+1.5
1,576,069	+				-0.1
1,576,069	+				-0.3
1,576,069	+				+0.1
1,576,069	+				-0.0
1,576,069	+				-0.5
1,576,070	-				-1.6
1,576,070	-				+0.1
1,576,070	-				+0.3
1,576,070	-				+0.3
1,576,070	-				+0.6
1,576,070	-				-0.3
1,576,070	-				-1.9
1,576,070	-				+0.3
1,576,070	-				-0.4
1,576,070	-				+0.5
1,576,070	-				-0.5
1,576,070	-				+0.3
1,576,070	-				-1.0
1,576,070	-				-0.2
1,576,070	-				-1.4
1,576,070	-				-2.0
1,576,070	-				-0.7
1,576,072	-				-1.9