Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01415

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,478,302	+		MPMX19_01414	0.41	+1.5
1,478,302	+		MPMX19_01414	0.41	+0.6
1,478,302	+		MPMX19_01414	0.41	-0.4
1,478,302	+		MPMX19_01414	0.41	+0.4
1,478,303	-		MPMX19_01414	0.41	-0.4
1,478,303	-		MPMX19_01414	0.41	+0.1
1,478,303	-		MPMX19_01414	0.41	+0.8
1,478,473	+		MPMX19_01414	0.57	-0.4
1,478,473	+		MPMX19_01414	0.57	-1.2
1,478,474	-		MPMX19_01414	0.57	-0.3
1,478,474	-		MPMX19_01414	0.57	+1.5
1,478,474	-		MPMX19_01414	0.57	+0.6
1,478,474	-		MPMX19_01414	0.57	-0.2
1,478,773	+		MPMX19_01414	0.84	-1.9
1,478,773	+		MPMX19_01414	0.84	-1.4
1,478,774	-		MPMX19_01414	0.84	+1.1
1,478,774	-		MPMX19_01414	0.84	-0.9
1,478,774	-		MPMX19_01414	0.84	-1.3
1,478,774	-		MPMX19_01414	0.84	-2.3
1,478,836	+				+0.1
1,478,836	+				-0.7
1,478,836	+				-2.1
1,478,836	+				-0.7
1,478,837	-				-1.3
1,478,837	-				-0.9
1,478,930	+				+0.3
1,478,930	+				+0.5
1,478,930	+				-0.4
1,478,930	+				-0.6
1,478,930	+				-1.3
1,478,930	+				-0.5
1,478,930	+				-0.8
1,478,930	+				-1.4
1,478,930	+				+0.2
1,478,930	+				-0.9
1,478,930	+				+0.5
1,478,930	+				+0.3
1,478,930	+				-1.5
1,478,931	-				+0.3
1,478,931	-				-1.5
1,478,931	-				-0.5
1,478,931	-				-0.2
1,478,931	-				+0.2
1,478,931	-				-0.3
1,478,931	-				+0.1
1,478,933	+				-1.7
1,478,933	+				+1.1
1,478,933	+				+1.1
1,478,933	+				-0.5
1,478,933	+				+1.4
1,478,934	-				-0.1
1,478,934	-				-1.3
1,478,934	-				-2.5
1,478,934	-				-1.3
1,478,996	-				-2.0
1,479,120	-				-1.5
1,479,120	-				-0.5
1,479,136	+				-1.1
1,479,136	+				+0.4
1,479,136	+				-1.3
1,479,136	+				-0.9
1,479,136	+				-0.5
1,479,137	-				+0.9
1,479,137	-				-0.5
1,479,137	-				-1.5
1,479,137	-				-0.5
1,479,137	-				-0.5
1,479,137	-				+1.1
1,479,137	-				-0.3
1,479,138	+				+1.1
1,479,138	+				-1.7
1,479,138	+				+0.4
1,479,138	+				-1.7
1,479,138	+				-0.9
1,479,138	+				+1.8
1,479,138	+				-1.3
1,479,138	+				-0.3
1,479,138	+				-1.4
1,479,138	+				-1.5
1,479,138	+				+1.6
1,479,138	+				-0.9
1,479,138	+				-1.3
1,479,138	+				+0.9
1,479,139	-				-0.2
1,479,139	-				+0.1
1,479,139	-				-1.5
1,479,139	-				-0.3
1,479,139	-				-0.3
1,479,139	-				-3.5
1,479,139	-				-0.3
1,479,139	-				-1.7
1,479,139	-				+0.1
1,479,139	-				-1.3
1,479,139	-				-1.0
1,479,139	-				-1.3
1,479,139	-				-0.9
1,479,318	+		MPMX19_01415	0.49	+0.7
1,479,318	+		MPMX19_01415	0.49	-1.3
1,479,318	+		MPMX19_01415	0.49	-1.7
1,479,318	+		MPMX19_01415	0.49	-0.3
1,479,319	-		MPMX19_01415	0.50	+0.1
1,479,319	-		MPMX19_01415	0.50	-0.8
1,479,319	-		MPMX19_01415	0.50	-1.5
1,479,319	-		MPMX19_01415	0.50	-0.9
1,479,319	-		MPMX19_01415	0.50	-1.7
1,479,319	-		MPMX19_01415	0.50	-0.2
1,479,319	-		MPMX19_01415	0.50	-0.5
1,479,656	+		MPMX19_01416	0.43	-1.1
1,479,656	+		MPMX19_01416	0.43	-0.3
1,479,657	-		MPMX19_01416	0.43	+0.1
1,479,657	-		MPMX19_01416	0.43	-0.3
1,479,657	-		MPMX19_01416	0.43	-0.3
1,479,657	-		MPMX19_01416	0.43	+0.1
1,479,779	+		MPMX19_01416	0.69	+0.1
1,479,779	+		MPMX19_01416	0.69	+1.4
1,479,779	+		MPMX19_01416	0.69	-1.5
1,479,779	+		MPMX19_01416	0.69	+0.1
1,479,779	+		MPMX19_01416	0.69	-0.1
1,479,779	+		MPMX19_01416	0.69	-0.3
1,479,779	+		MPMX19_01416	0.69	-0.1
1,479,779	+		MPMX19_01416	0.69	+0.5
1,479,780	-		MPMX19_01416	0.69	-2.4
1,479,780	-		MPMX19_01416	0.69	+0.3
1,479,780	-		MPMX19_01416	0.69	+1.1
1,479,780	-		MPMX19_01416	0.69	-1.3
1,479,780	-		MPMX19_01416	0.69	+0.1
1,479,780	-		MPMX19_01416	0.69	-0.1
1,479,780	-		MPMX19_01416	0.69	+1.1
1,479,780	-		MPMX19_01416	0.69	-0.8
1,479,955	+				-0.5
1,479,955	+				+1.7
1,479,955	+				+0.7
1,479,955	+				-0.9
1,479,955	+				+0.1
1,479,955	+				-2.7
1,479,956	-				-0.2
1,479,956	-				+0.1
1,479,956	-				-3.1
1,479,956	-				-0.7
1,479,966	+				-1.3
1,479,966	+				-0.9
1,479,966	+				-0.3
1,479,966	+				-0.3
1,479,966	+				-0.2
1,479,966	+				-0.5
1,479,966	+				+0.3
1,479,966	+				-0.9
1,479,966	+				-1.9
1,479,966	+				+0.7
1,479,966	+				+0.5
1,479,966	+				-0.9
1,479,966	+				-0.9
1,479,966	+				-1.3
1,479,966	+				+0.6
1,479,966	+				-1.7
1,479,966	+				-1.5
1,479,966	+				-0.9
1,479,966	+				-2.3
1,479,966	+				+1.1
1,479,966	+				-1.5
1,479,966	+				-0.3
1,479,966	+				-0.9
1,479,966	+				-2.1
1,479,966	+				-0.9
1,479,966	+				+0.2
1,479,966	+				-0.5
1,479,966	+				-0.5
1,479,966	+				-0.1
1,479,966	+				-1.9
1,479,966	+				-1.3
1,479,966	+				-0.5
1,479,966	+				-1.0
1,479,966	+				-1.0
1,479,967	-				-0.3
1,479,967	-				-1.1
1,479,967	-				-1.3
1,479,967	-				-1.8
1,479,967	-				-0.8
1,479,967	-				-0.1
1,479,967	-				-1.4
1,479,967	-				-1.5
1,479,967	-				-1.6
1,479,967	-				-0.9
1,479,967	-				+1.1
1,479,967	-				-2.4
1,479,967	-				-1.7
1,479,967	-				+0.3
1,479,967	-				-1.3
1,479,967	-				+0.3
1,479,967	-				-1.7
1,479,967	-				-1.4
1,479,967	-				-0.9
1,479,967	-				-1.3
1,479,967	-				+1.5
1,479,967	-				+0.3
1,479,967	-				+0.1
1,479,967	-				-1.3
1,479,967	-				+0.1
1,479,968	+				-2.5
1,479,968	+				-1.1
1,479,968	+				+0.3
1,479,968	+				-1.5
1,479,968	+				-2.5
1,479,968	+				+0.9
1,479,968	+				+0.1
1,479,968	+				-1.1
1,479,968	+				-0.5
1,479,968	+				+0.5
1,479,968	+				-2.1
1,479,968	+				-1.3
1,479,968	+				-0.4
1,479,968	+				-0.1
1,479,968	+				-1.3
1,479,968	+				-0.2
1,479,968	+				+0.5
1,479,968	+				+0.7
1,479,968	+				-0.1
1,479,968	+				-1.3
1,479,968	+				-0.8
1,479,968	+				-0.0
1,479,968	+				+1.1
1,479,968	+				+0.7
1,479,968	+				-0.4
1,479,968	+				+0.1
1,479,968	+				-1.5
1,479,968	+				-1.1
1,479,968	+				-0.3
1,479,968	+				-2.3
1,479,969	-				-1.0
1,479,969	-				+0.5
1,479,969	-				-1.5
1,479,969	-				-0.4
1,479,969	-				-2.5
1,479,969	-				-1.1
1,479,969	-				-0.5
1,479,969	-				-0.9
1,479,969	-				-0.5
1,479,969	-				-0.1
1,479,969	-				-2.3
1,479,969	-				+0.7
1,479,969	-				-0.7
1,479,969	-				-0.8
1,479,969	-				-0.3
1,479,969	-				-0.1
1,479,969	-				-0.2
1,479,969	-				+0.1
1,479,969	-				-1.4
1,479,969	-				+0.5
1,479,969	-				-1.3
1,479,981	+				-2.7
1,479,981	+				-0.7
1,479,981	+				-2.4
1,479,981	+				-0.9
1,479,981	+				+0.3
1,479,981	+				-0.8
1,479,981	+				-0.5
1,479,981	+				-0.7
1,479,981	+				+0.0
1,479,981	+				-0.3
1,479,981	+				-0.6
1,479,981	+				-0.2
1,479,981	+				-0.1
1,479,981	+				-0.5
1,479,981	+				-1.2
1,479,981	+				-0.2
1,479,981	+				+1.1
1,479,981	+				-0.9
1,479,982	-				-0.6
1,479,982	-				-0.4
1,479,982	-				+0.1
1,479,982	-				-1.0
1,479,982	-				-1.3
1,479,982	-				-1.7
1,479,982	-				-1.3
1,479,982	-				-0.6
1,479,982	-				-1.5
1,479,982	-				-3.0
1,479,982	-				+0.3
1,479,982	-				-1.5
1,480,095	+				-1.7
1,480,097	+				+0.3
1,480,097	+				+1.1