Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01366

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,422,409	+		MPMX19_01364	0.75	+0.0
1,422,409	+		MPMX19_01364	0.75	-0.5
1,422,409	+		MPMX19_01364	0.75	-1.1
1,422,409	+		MPMX19_01364	0.75	+0.8
1,422,409	+		MPMX19_01364	0.75	-1.5
1,422,409	+		MPMX19_01364	0.75	-1.8
1,422,409	+		MPMX19_01364	0.75	-0.4
1,422,409	+		MPMX19_01364	0.75	-3.0
1,422,410	-		MPMX19_01364	0.76	-0.2
1,422,410	-		MPMX19_01364	0.76	+1.0
1,422,410	-		MPMX19_01364	0.76	-1.5
1,422,410	-		MPMX19_01364	0.76	-0.8
1,422,410	-		MPMX19_01364	0.76	-1.0
1,422,410	-		MPMX19_01364	0.76	-0.7
1,422,410	-		MPMX19_01364	0.76	-1.0
1,422,410	-		MPMX19_01364	0.76	-2.0
1,422,650	+				-0.1
1,422,650	+				+0.1
1,422,650	+				-1.8
1,422,650	+				-0.8
1,422,650	+				-1.5
1,422,650	+				-1.3
1,422,651	-				-0.3
1,422,651	-				-0.5
1,422,703	+				+1.6
1,422,703	+				+0.2
1,422,703	+				+0.7
1,422,703	+				+1.0
1,422,703	+				-0.6
1,422,703	+				+1.5
1,422,704	-				-2.1
1,422,704	-				-1.3
1,422,704	-				+0.6
1,422,704	-				-0.5
1,422,704	-				+1.0
1,422,722	+				-1.8
1,422,722	+				+1.6
1,422,722	+				-2.3
1,422,722	+				-1.0
1,422,722	+				+0.5
1,422,722	+				+0.0
1,422,722	+				+0.1
1,422,722	+				-0.8
1,422,722	+				-0.5
1,422,722	+				+2.0
1,422,723	-				-1.0
1,422,723	-				-0.5
1,422,723	-				-0.8
1,422,723	-				-1.0
1,422,723	-				-1.0
1,422,982	+		MPMX19_01365	0.37	-1.0
1,422,982	+		MPMX19_01365	0.37	+0.5
1,422,982	+		MPMX19_01365	0.37	-0.6
1,422,983	-		MPMX19_01365	0.37	-1.8
1,423,256	+				+2.4
1,423,256	+				-1.0
1,423,497	+		MPMX19_01366	0.19	-0.4
1,423,497	+		MPMX19_01366	0.19	+0.0
1,423,497	+		MPMX19_01366	0.19	-1.5
1,423,497	+		MPMX19_01366	0.19	-1.3
1,423,497	+		MPMX19_01366	0.19	+0.5
1,423,497	+		MPMX19_01366	0.19	-0.3
1,423,497	+		MPMX19_01366	0.19	-1.3
1,423,497	+		MPMX19_01366	0.19	-0.3
1,423,497	+		MPMX19_01366	0.19	+1.0
1,423,497	+		MPMX19_01366	0.19	+0.6
1,423,497	+		MPMX19_01366	0.19	+0.6
1,423,497	+		MPMX19_01366	0.19	-0.6
1,423,497	+		MPMX19_01366	0.19	-1.3
1,423,497	+		MPMX19_01366	0.19	-1.9
1,423,497	+		MPMX19_01366	0.19	-2.1
1,423,497	+		MPMX19_01366	0.19	+0.7
1,423,497	+		MPMX19_01366	0.19	+0.7
1,423,497	+		MPMX19_01366	0.19	-0.7
1,423,497	+		MPMX19_01366	0.19	-0.2
1,423,497	+		MPMX19_01366	0.19	-0.1
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	-0.6
1,423,498	-		MPMX19_01366	0.19	-1.1
1,423,498	-		MPMX19_01366	0.19	-2.0
1,423,498	-		MPMX19_01366	0.19	-1.0
1,423,498	-		MPMX19_01366	0.19	+1.0
1,423,498	-		MPMX19_01366	0.19	+0.9
1,423,498	-		MPMX19_01366	0.19	-1.0
1,423,498	-		MPMX19_01366	0.19	-2.0
1,423,498	-		MPMX19_01366	0.19	-1.5
1,423,498	-		MPMX19_01366	0.19	-1.3
1,423,498	-		MPMX19_01366	0.19	-0.5
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	-1.0
1,423,498	-		MPMX19_01366	0.19	-0.4
1,423,498	-		MPMX19_01366	0.19	+0.3
1,423,498	-		MPMX19_01366	0.19	-0.3
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	-2.1
1,423,498	-		MPMX19_01366	0.19	-0.0
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	+0.7
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	+0.5
1,423,498	-		MPMX19_01366	0.19	-1.0
1,423,498	-		MPMX19_01366	0.19	-0.8
1,423,498	-		MPMX19_01366	0.19	+0.0
1,423,498	-		MPMX19_01366	0.19	+0.5
1,423,498	-		MPMX19_01366	0.19	+0.5
1,423,498	-		MPMX19_01366	0.19	-1.3
1,423,498	-		MPMX19_01366	0.19	-0.3
1,423,543	+		MPMX19_01366	0.23	-1.5
1,423,543	+		MPMX19_01366	0.23	-0.5
1,423,543	+		MPMX19_01366	0.23	-0.7
1,423,543	+		MPMX19_01366	0.23	-1.1
1,423,543	+		MPMX19_01366	0.23	+0.0
1,423,543	+		MPMX19_01366	0.23	-0.3
1,423,543	+		MPMX19_01366	0.23	-2.1
1,423,544	-		MPMX19_01366	0.23	+0.2
1,423,544	-		MPMX19_01366	0.23	-1.8
1,423,544	-		MPMX19_01366	0.23	-1.0
1,423,699	-		MPMX19_01366	0.39	-0.2
1,423,748	+		MPMX19_01366	0.44	-0.7
1,423,748	+		MPMX19_01366	0.44	-2.1
1,423,748	+		MPMX19_01366	0.44	-2.4
1,423,748	+		MPMX19_01366	0.44	-1.0
1,423,748	+		MPMX19_01366	0.44	-1.5
1,423,748	+		MPMX19_01366	0.44	-1.6
1,423,748	+		MPMX19_01366	0.44	-1.0
1,423,748	+		MPMX19_01366	0.44	+0.0
1,423,749	-		MPMX19_01366	0.44	-0.4
1,423,749	-		MPMX19_01366	0.44	-0.5
1,423,749	-		MPMX19_01366	0.44	-0.5
1,423,749	-		MPMX19_01366	0.44	+2.0
1,423,749	-		MPMX19_01366	0.44	+0.0
1,423,756	+		MPMX19_01366	0.45	-1.0
1,423,756	+		MPMX19_01366	0.45	-1.0
1,423,756	+		MPMX19_01366	0.45	+0.2
1,423,757	-		MPMX19_01366	0.45	-2.4
1,423,757	-		MPMX19_01366	0.45	-1.0
1,423,757	-		MPMX19_01366	0.45	-1.5
1,423,981	+		MPMX19_01366	0.67	-1.0
1,423,981	+		MPMX19_01366	0.67	-0.8
1,423,981	+		MPMX19_01366	0.67	-1.6
1,423,981	+		MPMX19_01366	0.67	-1.2
1,423,981	+		MPMX19_01366	0.67	-1.0
1,423,981	+		MPMX19_01366	0.67	-1.0
1,423,981	+		MPMX19_01366	0.67	+0.6
1,423,981	+		MPMX19_01366	0.67	+0.0
1,423,981	+		MPMX19_01366	0.67	+0.0
1,423,981	+		MPMX19_01366	0.67	-1.5
1,423,981	+		MPMX19_01366	0.67	-0.4
1,423,981	+		MPMX19_01366	0.67	-0.8
1,423,981	+		MPMX19_01366	0.67	+1.0
1,423,981	+		MPMX19_01366	0.67	-0.5
1,423,981	+		MPMX19_01366	0.67	-0.7
1,423,982	-		MPMX19_01366	0.68	-1.0
1,423,982	-		MPMX19_01366	0.68	-2.8
1,423,982	-		MPMX19_01366	0.68	+0.5
1,423,982	-		MPMX19_01366	0.68	+1.4
1,423,982	-		MPMX19_01366	0.68	+0.5
1,423,982	-		MPMX19_01366	0.68	+1.6
1,423,982	-		MPMX19_01366	0.68	-2.1
1,423,982	-		MPMX19_01366	0.68	+0.3
1,423,982	-		MPMX19_01366	0.68	+0.0
1,423,982	-		MPMX19_01366	0.68	-1.4
1,423,982	-		MPMX19_01366	0.68	-2.0
1,423,982	-		MPMX19_01366	0.68	-0.2
1,423,982	-		MPMX19_01366	0.68	-0.2
1,423,982	-		MPMX19_01366	0.68	+0.7
1,423,982	-		MPMX19_01366	0.68	+1.0
1,423,985	+		MPMX19_01366	0.68	+0.3
1,423,985	+		MPMX19_01366	0.68	-1.3
1,423,985	+		MPMX19_01366	0.68	-0.3
1,423,985	+		MPMX19_01366	0.68	-1.7
1,423,985	+		MPMX19_01366	0.68	-1.6
1,423,985	+		MPMX19_01366	0.68	-1.3
1,423,985	+		MPMX19_01366	0.68	-1.1
1,423,985	+		MPMX19_01366	0.68	+2.0
1,423,985	+		MPMX19_01366	0.68	-1.2
1,423,985	+		MPMX19_01366	0.68	-2.1
1,423,985	+		MPMX19_01366	0.68	-0.5
1,423,985	+		MPMX19_01366	0.68	+0.0
1,423,986	-		MPMX19_01366	0.68	-1.1
1,423,986	-		MPMX19_01366	0.68	-1.0
1,423,986	-		MPMX19_01366	0.68	+0.3
1,423,986	-		MPMX19_01366	0.68	-1.4
1,423,986	-		MPMX19_01366	0.68	-1.3
1,423,986	-		MPMX19_01366	0.68	-0.1
1,423,986	-		MPMX19_01366	0.68	-0.5
1,423,986	-		MPMX19_01366	0.68	+0.3
1,423,986	-		MPMX19_01366	0.68	-1.8
1,423,986	-		MPMX19_01366	0.68	+1.0
1,423,986	-		MPMX19_01366	0.68	-2.0
1,423,986	-		MPMX19_01366	0.68	+0.0
1,423,986	-		MPMX19_01366	0.68	-1.0
1,423,986	-		MPMX19_01366	0.68	+1.0
1,423,986	-		MPMX19_01366	0.68	+1.0
1,423,986	-		MPMX19_01366	0.68	-0.4
1,423,986	-		MPMX19_01366	0.68	+0.4
1,423,986	-		MPMX19_01366	0.68	+0.0
1,423,986	-		MPMX19_01366	0.68	+0.0
1,423,986	-		MPMX19_01366	0.68	-1.0
1,423,987	+		MPMX19_01366	0.68	-2.3
1,423,987	+		MPMX19_01366	0.68	+1.6
1,423,988	-		MPMX19_01366	0.68	-0.4
1,423,988	-		MPMX19_01366	0.68	-0.5
1,423,988	-		MPMX19_01366	0.68	-1.4
1,423,988	-		MPMX19_01366	0.68	-0.8
1,423,988	-		MPMX19_01366	0.68	+0.0
1,423,988	-		MPMX19_01366	0.68	-0.8
1,424,019	+		MPMX19_01366	0.71	-1.2
1,424,019	+		MPMX19_01366	0.71	-0.8
1,424,020	-		MPMX19_01366	0.71	-0.2
1,424,110	+		MPMX19_01366	0.80	+0.4
1,424,110	+		MPMX19_01366	0.80	-1.5
1,424,110	+		MPMX19_01366	0.80	+0.5
1,424,110	+		MPMX19_01366	0.80	-0.1
1,424,110	+		MPMX19_01366	0.80	-2.1
1,424,110	+		MPMX19_01366	0.80	-1.5
1,424,110	+		MPMX19_01366	0.80	-0.9
1,424,111	-		MPMX19_01366	0.81	+1.8
1,424,111	-		MPMX19_01366	0.81	-0.4
1,424,111	-		MPMX19_01366	0.81	-1.1
1,424,111	-		MPMX19_01366	0.81	-0.5
1,424,173	+		MPMX19_01366	0.87	-0.5
1,424,173	+		MPMX19_01366	0.87	-1.0
1,424,173	+		MPMX19_01366	0.87	-1.1
1,424,382	+				-1.5
1,424,382	+				+0.0
1,424,382	+				-2.4
1,424,382	+				-0.4
1,424,382	+				+1.0
1,424,383	-				+0.0
1,424,383	-				-1.2
1,424,383	-				-0.9
1,424,427	+				-1.0
1,424,427	+				+1.6
1,424,427	+				-0.3
1,424,427	+				-2.3
1,424,427	+				-2.0
1,424,427	+				-0.8
1,424,427	+				+0.5
1,424,427	+				-0.4
1,424,428	-				+0.0
1,424,715	-		MPMX19_01367	0.57	-0.3
1,424,820	+		MPMX19_01367	0.82	+0.8
1,424,820	+		MPMX19_01367	0.82	+0.6
1,424,820	+		MPMX19_01367	0.82	+0.0
1,424,820	+		MPMX19_01367	0.82	-1.0
1,424,820	+		MPMX19_01367	0.82	+1.8
1,424,821	-		MPMX19_01367	0.82	-1.5
1,424,821	-		MPMX19_01367	0.82	-1.5
1,424,821	-		MPMX19_01367	0.82	-2.4
1,424,892	+				-1.2
1,424,892	+				+0.3
1,424,893	-				+0.5
1,424,908	+				-1.3
1,424,908	+				+0.9
1,424,909	-				-1.0
1,424,909	-				-1.3
1,424,909	-				-1.5
1,424,909	-				+3.4
1,424,995	+				+0.4
1,425,165	+				-1.0
1,425,165	+				+0.9
1,425,165	+				-1.3
1,425,165	+				-0.5
1,425,165	+				-2.0
1,425,165	+				+0.0
1,425,165	+				+0.5
1,425,165	+				-0.5
1,425,165	+				-2.3
1,425,165	+				+0.4
1,425,165	+				+0.7
1,425,165	+				-1.1
1,425,165	+				-0.7
1,425,165	+				-1.5
1,425,165	+				-0.5
1,425,166	-				+0.5
1,425,166	-				-0.9
1,425,166	-				-0.2
1,425,166	-				-2.3
1,425,166	-				-2.5
1,425,222	+		MPMX19_01368	0.10	+1.0
1,425,222	+		MPMX19_01368	0.10	-0.5
1,425,223	-		MPMX19_01368	0.10	-1.3
1,425,232	-		MPMX19_01368	0.11	+0.0
1,425,234	+		MPMX19_01368	0.11	-0.5
1,425,234	+		MPMX19_01368	0.11	-0.8
1,425,235	-		MPMX19_01368	0.11	-0.3
1,425,235	-		MPMX19_01368	0.11	-0.3