Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01122

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,155,926	+		MPMX19_01121	0.11	-0.1
1,155,926	+		MPMX19_01121	0.11	+0.5
1,155,927	-		MPMX19_01121	0.11	-1.0
1,155,927	-		MPMX19_01121	0.11	-0.2
1,155,927	-		MPMX19_01121	0.11	-0.3
1,155,927	-		MPMX19_01121	0.11	-0.7
1,156,349	+		MPMX19_01121	0.62	-0.5
1,156,349	+		MPMX19_01121	0.62	+0.1
1,156,349	+		MPMX19_01121	0.62	+0.7
1,156,349	+		MPMX19_01121	0.62	-1.4
1,156,349	+		MPMX19_01121	0.62	+0.2
1,156,350	-		MPMX19_01121	0.62	-0.9
1,156,350	-		MPMX19_01121	0.62	+0.8
1,156,350	-		MPMX19_01121	0.62	-1.5
1,156,406	+		MPMX19_01121	0.69	-0.7
1,156,407	-		MPMX19_01121	0.69	-0.7
1,156,407	-		MPMX19_01121	0.69	+0.1
1,156,496	+		MPMX19_01121	0.80	+0.3
1,156,496	+		MPMX19_01121	0.80	+0.6
1,156,496	+		MPMX19_01121	0.80	-0.5
1,156,496	+		MPMX19_01121	0.80	+0.5
1,156,496	+		MPMX19_01121	0.80	-0.1
1,156,497	-		MPMX19_01121	0.80	+0.1
1,156,497	-		MPMX19_01121	0.80	+0.7
1,156,497	-		MPMX19_01121	0.80	-0.7
1,156,497	-		MPMX19_01121	0.80	-1.4
1,156,550	+		MPMX19_01121	0.86	-0.1
1,156,550	+		MPMX19_01121	0.86	-1.4
1,156,550	+		MPMX19_01121	0.86	-0.1
1,156,550	+		MPMX19_01121	0.86	+1.1
1,156,550	+		MPMX19_01121	0.86	-1.1
1,156,550	+		MPMX19_01121	0.86	-0.1
1,156,550	+		MPMX19_01121	0.86	+0.6
1,156,550	+		MPMX19_01121	0.86	-0.6
1,156,550	+		MPMX19_01121	0.86	-1.1
1,156,550	+		MPMX19_01121	0.86	-0.9
1,156,550	+		MPMX19_01121	0.86	-1.7
1,156,550	+		MPMX19_01121	0.86	-0.4
1,156,550	+		MPMX19_01121	0.86	+0.6
1,156,550	+		MPMX19_01121	0.86	+0.3
1,156,551	-		MPMX19_01121	0.86	+0.6
1,156,551	-		MPMX19_01121	0.86	-1.0
1,156,551	-		MPMX19_01121	0.86	-0.1
1,156,551	-		MPMX19_01121	0.86	-0.5
1,156,551	-		MPMX19_01121	0.86	+1.1
1,156,551	-		MPMX19_01121	0.86	-0.5
1,156,551	-		MPMX19_01121	0.86	-0.5
1,156,551	-		MPMX19_01121	0.86	-1.0
1,156,551	-		MPMX19_01121	0.86	+0.1
1,156,551	-		MPMX19_01121	0.86	-0.1
1,156,551	-		MPMX19_01121	0.86	-0.3
1,156,551	-		MPMX19_01121	0.86	-0.2
1,156,551	-		MPMX19_01121	0.86	+0.1
1,156,551	-		MPMX19_01121	0.86	-0.3
1,156,551	-		MPMX19_01121	0.86	-1.2
1,156,551	-		MPMX19_01121	0.86	-2.4
1,156,564	-		MPMX19_01121	0.88	-1.4
1,156,683	+				+0.3
1,156,683	+				+0.1
1,156,683	+				-1.5
1,156,683	+				-1.5
1,156,683	+				+0.1
1,156,683	+				+0.5
1,156,683	+				-1.5
1,156,683	+				-0.2
1,156,683	+				-0.1
1,156,684	-				-1.5
1,156,684	-				-0.8
1,156,684	-				-1.5
1,156,684	-				-0.4
1,156,684	-				-0.2
1,156,723	+				-0.1
1,156,723	+				-1.1
1,156,723	+				-0.5
1,156,723	+				-0.4
1,156,723	+				+0.1
1,156,723	+				-0.5
1,156,723	+				+0.5
1,156,723	+				-1.5
1,156,723	+				-0.5
1,156,723	+				-1.0
1,156,723	+				-1.4
1,156,724	-				-1.2
1,156,724	-				-1.5
1,156,724	-				-0.1
1,156,724	-				-0.3
1,156,724	-				+0.1
1,156,727	+				-0.7
1,156,727	+				+0.8
1,156,727	+				-0.5
1,156,727	+				-1.1
1,156,727	+				-0.9
1,156,727	+				-1.1
1,156,727	+				-0.1
1,156,728	-				-0.5
1,156,728	-				+0.8
1,156,728	-				-0.5
1,156,728	-				-0.9
1,156,728	-				-0.8
1,156,728	-				-0.1
1,156,728	-				-2.0
1,156,786	+				+0.2
1,156,786	+				+0.4
1,156,786	+				-0.5
1,156,786	+				-0.2
1,156,786	+				-0.7
1,156,786	+				-0.9
1,156,786	+				-1.2
1,156,786	+				-0.7
1,156,786	+				-0.5
1,156,786	+				-0.7
1,156,786	+				-1.9
1,156,786	+				+0.7
1,156,786	+				-0.9
1,156,786	+				-0.2
1,156,786	+				-1.9
1,156,786	+				+1.6
1,156,786	+				+0.5
1,156,787	-				+0.9
1,156,787	-				+0.6
1,156,787	-				-0.3
1,156,787	-				+0.1
1,156,787	-				-0.2
1,156,787	-				-0.5
1,156,787	-				+0.9
1,156,787	-				-0.7
1,156,787	-				-1.2
1,156,787	-				+0.1
1,156,787	-				-0.3
1,156,787	-				-1.6
1,156,787	-				-0.9
1,156,804	+				-0.5
1,156,804	+				-0.2
1,156,805	-				-0.4
1,156,805	-				+0.7
1,156,805	-				-0.7
1,156,805	-				+0.3
1,156,805	-				-1.2
1,156,870	+				+0.1
1,156,870	+				+0.3
1,156,870	+				-0.4
1,156,871	-				-1.1
1,156,871	-				+0.9
1,156,871	-				+1.5
1,156,871	-				+1.3
1,156,871	-				-0.0
1,157,011	+		MPMX19_01122	0.24	-0.2
1,157,011	+		MPMX19_01122	0.24	+0.9
1,157,011	+		MPMX19_01122	0.24	+0.5
1,157,011	+		MPMX19_01122	0.24	+0.1
1,157,011	+		MPMX19_01122	0.24	-0.6
1,157,011	+		MPMX19_01122	0.24	-1.2
1,157,011	+		MPMX19_01122	0.24	-1.7
1,157,011	+		MPMX19_01122	0.24	-0.2
1,157,011	+		MPMX19_01122	0.24	-0.5
1,157,011	+		MPMX19_01122	0.24	-0.5
1,157,011	+		MPMX19_01122	0.24	+0.8
1,157,012	-		MPMX19_01122	0.24	+2.1
1,157,012	-		MPMX19_01122	0.24	+0.7
1,157,012	-		MPMX19_01122	0.24	+0.8
1,157,012	-		MPMX19_01122	0.24	+0.5
1,157,012	-		MPMX19_01122	0.24	+0.1
1,157,012	-		MPMX19_01122	0.24	-0.6
1,157,012	-		MPMX19_01122	0.24	-2.5
1,157,012	-		MPMX19_01122	0.24	-1.5
1,157,012	-		MPMX19_01122	0.24	+0.1
1,157,012	-		MPMX19_01122	0.24	+0.1
1,157,012	-		MPMX19_01122	0.24	-0.5
1,157,102	-		MPMX19_01122	0.34	-0.5
1,157,102	-		MPMX19_01122	0.34	-1.5
1,157,128	+		MPMX19_01122	0.36	+0.8
1,157,128	+		MPMX19_01122	0.36	+0.5
1,157,128	+		MPMX19_01122	0.36	-1.0
1,157,128	+		MPMX19_01122	0.36	+0.7
1,157,128	+		MPMX19_01122	0.36	-1.5
1,157,128	+		MPMX19_01122	0.36	-0.2
1,157,128	+		MPMX19_01122	0.36	-2.1
1,157,128	+		MPMX19_01122	0.36	-2.1
1,157,128	+		MPMX19_01122	0.36	-1.3
1,157,128	+		MPMX19_01122	0.36	+0.3
1,157,128	+		MPMX19_01122	0.36	+0.5
1,157,129	-		MPMX19_01122	0.37	-1.2
1,157,129	-		MPMX19_01122	0.37	+2.1
1,157,129	-		MPMX19_01122	0.37	+0.2
1,157,129	-		MPMX19_01122	0.37	-0.2
1,157,129	-		MPMX19_01122	0.37	+0.1
1,157,129	-		MPMX19_01122	0.37	+1.7
1,157,129	-		MPMX19_01122	0.37	-2.6
1,157,332	+		MPMX19_01122	0.58	-0.9
1,157,332	+		MPMX19_01122	0.58	-1.1
1,157,332	+		MPMX19_01122	0.58	-1.2
1,157,332	+		MPMX19_01122	0.58	-2.9
1,157,333	-		MPMX19_01122	0.58	+0.1
1,157,479	+		MPMX19_01122	0.74	-0.2
1,157,479	+		MPMX19_01122	0.74	-1.7
1,157,479	+		MPMX19_01122	0.74	-1.2
1,157,480	-		MPMX19_01122	0.74	+0.1
1,157,480	-		MPMX19_01122	0.74	-0.1
1,157,480	-		MPMX19_01122	0.74	-0.9
1,157,480	-		MPMX19_01122	0.74	-0.2
1,157,480	-		MPMX19_01122	0.74	-1.1
1,157,823	+		MPMX19_01123	0.10	+1.7
1,157,823	+		MPMX19_01123	0.10	-0.7
1,157,823	+		MPMX19_01123	0.10	+0.9
1,157,824	-		MPMX19_01123	0.10	-3.3
1,157,824	-		MPMX19_01123	0.10	-0.3
1,157,824	-		MPMX19_01123	0.10	-0.5
1,157,824	-		MPMX19_01123	0.10	-0.2
1,157,910	+		MPMX19_01123	0.22	-1.6
1,157,910	+		MPMX19_01123	0.22	-0.7
1,157,910	+		MPMX19_01123	0.22	-0.7
1,157,911	-		MPMX19_01123	0.22	-0.2
1,157,911	-		MPMX19_01123	0.22	+1.6
1,157,984	+		MPMX19_01123	0.31	-1.2
1,157,984	+		MPMX19_01123	0.31	-1.7
1,157,984	+		MPMX19_01123	0.31	-2.3
1,157,984	+		MPMX19_01123	0.31	+1.2
1,157,984	+		MPMX19_01123	0.31	-0.1
1,157,985	-		MPMX19_01123	0.31	-1.7
1,157,985	-		MPMX19_01123	0.31	-0.5
1,157,985	-		MPMX19_01123	0.31	-0.3
1,158,132	+		MPMX19_01123	0.51	+0.1
1,158,132	+		MPMX19_01123	0.51	-0.5
1,158,132	+		MPMX19_01123	0.51	-0.7
1,158,132	+		MPMX19_01123	0.51	+0.1
1,158,132	+		MPMX19_01123	0.51	-0.5
1,158,132	+		MPMX19_01123	0.51	+0.1
1,158,132	+		MPMX19_01123	0.51	-2.5
1,158,132	+		MPMX19_01123	0.51	-1.3
1,158,132	+		MPMX19_01123	0.51	-0.7
1,158,132	+		MPMX19_01123	0.51	-1.2
1,158,132	+		MPMX19_01123	0.51	-0.5
1,158,132	+		MPMX19_01123	0.51	-1.1
1,158,133	-		MPMX19_01123	0.51	+0.1
1,158,133	-		MPMX19_01123	0.51	-0.3
1,158,133	-		MPMX19_01123	0.51	-1.3
1,158,133	-		MPMX19_01123	0.51	+1.1
1,158,133	-		MPMX19_01123	0.51	+1.1
1,158,133	-		MPMX19_01123	0.51	-0.9
1,158,133	-		MPMX19_01123	0.51	-0.6
1,158,133	-		MPMX19_01123	0.51	+0.1
1,158,133	-		MPMX19_01123	0.51	-1.5
1,158,133	-		MPMX19_01123	0.51	+1.1
1,158,133	-		MPMX19_01123	0.51	-2.4
1,158,133	-		MPMX19_01123	0.51	+1.1
1,158,133	-		MPMX19_01123	0.51	-0.3
1,158,133	-		MPMX19_01123	0.51	+0.3
1,158,133	-		MPMX19_01123	0.51	-0.5
1,158,133	-		MPMX19_01123	0.51	+0.1
1,158,133	-		MPMX19_01123	0.51	+0.1
1,158,133	-		MPMX19_01123	0.51	-0.8
1,158,133	-		MPMX19_01123	0.51	+0.1
1,158,174	+		MPMX19_01123	0.56	+0.8
1,158,174	+		MPMX19_01123	0.56	+0.5
1,158,174	+		MPMX19_01123	0.56	-0.9
1,158,175	-		MPMX19_01123	0.56	-0.7
1,158,175	-		MPMX19_01123	0.56	-1.7
1,158,175	-		MPMX19_01123	0.56	+0.9
1,158,423	+		MPMX19_01123	0.88	-1.6
1,158,423	+		MPMX19_01123	0.88	-0.9
1,158,423	+		MPMX19_01123	0.88	+0.3
1,158,423	+		MPMX19_01123	0.88	+0.1
1,158,424	-		MPMX19_01123	0.89	+0.6
1,158,424	-		MPMX19_01123	0.89	-1.3
1,158,500	+				-1.7
1,158,500	+				+1.1
1,158,500	+				-1.9
1,158,500	+				-0.9
1,158,501	-				-0.3
1,158,501	-				-0.5
1,158,501	-				-0.5
1,158,501	-				+1.3
1,158,652	-		MPMX19_01124	0.20	-1.9