Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02754

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
2,896,245	+		MPMX19_02752	0.36	-0.1
2,896,252	-		MPMX19_02752	0.38	-0.3
2,896,252	-		MPMX19_02752	0.38	+0.1
2,896,346	+		MPMX19_02752	0.74	-0.0
2,896,347	-		MPMX19_02752	0.74	-1.3
2,896,365	+		MPMX19_02752	0.81	-0.9
2,896,365	+		MPMX19_02752	0.81	-1.7
2,896,366	-		MPMX19_02752	0.81	+0.7
2,897,087	-				+1.7
2,897,087	-				-1.5
2,897,087	-				+0.1
2,897,087	-				-0.7
2,897,087	-				-0.3
2,897,087	-				-0.9
2,897,087	-				-0.2
2,897,150	-				-1.3
2,897,249	+				-0.7
2,897,249	+				+0.8
2,897,249	+				+0.7
2,897,249	+				-0.9
2,897,249	+				-0.9
2,897,249	+				+0.3
2,897,249	+				+0.3
2,897,249	+				-0.8
2,897,249	+				-1.9
2,897,249	+				+1.7
2,897,249	+				-0.9
2,897,249	+				-1.5
2,897,249	+				+1.0
2,897,249	+				+0.7
2,897,249	+				-0.3
2,897,249	+				+0.1
2,897,249	+				-2.3
2,897,249	+				+0.3
2,897,249	+				+1.7
2,897,249	+				-1.6
2,897,249	+				-0.3
2,897,249	+				+0.1
2,897,249	+				+0.9
2,897,249	+				-1.4
2,897,249	+				-1.3
2,897,249	+				-0.3
2,897,249	+				-0.3
2,897,249	+				-0.0
2,897,250	-				-0.1
2,897,250	-				-1.0
2,897,250	-				+0.4
2,897,250	-				-0.9
2,897,250	-				+0.9
2,897,250	-				-2.1
2,897,250	-				-0.7
2,897,250	-				+0.8
2,897,250	-				-0.7
2,897,250	-				-0.3
2,897,250	-				-0.3
2,897,250	-				+0.1
2,897,250	-				-0.5
2,897,250	-				+0.7
2,897,250	-				-1.0
2,897,250	-				+0.1
2,897,250	-				-0.1
2,897,250	-				-0.9
2,897,250	-				-0.2
2,897,250	-				-0.2
2,897,250	-				-0.6
2,897,250	-				-3.1
2,897,362	+				-0.7
2,897,362	+				+1.1
2,897,362	+				-0.6
2,897,362	+				-0.9
2,897,362	+				-0.3
2,897,362	+				+1.3
2,897,362	+				-2.3
2,897,362	+				-0.7
2,897,362	+				-1.5
2,897,362	+				-0.7
2,897,362	+				+1.7
2,897,362	+				-0.4
2,897,362	+				+0.1
2,897,362	+				-0.1
2,897,362	+				-1.9
2,897,362	+				-0.9
2,897,362	+				-0.6
2,897,362	+				-1.9
2,897,362	+				+0.3
2,897,363	-				-0.7
2,897,363	-				+1.0
2,897,363	-				+0.1
2,897,363	-				-0.9
2,897,363	-				+0.7
2,897,363	-				-2.9
2,897,363	-				+0.1
2,897,363	-				-0.7
2,897,363	-				+0.2
2,897,363	-				-1.3
2,897,363	-				-0.2
2,897,363	-				-1.9
2,897,363	-				+0.7
2,897,363	-				-0.7
2,897,473	+		MPMX19_02754	0.14	-1.3
2,897,473	+		MPMX19_02754	0.14	-0.0
2,897,473	+		MPMX19_02754	0.14	+1.3
2,897,473	+		MPMX19_02754	0.14	-0.2
2,897,473	+		MPMX19_02754	0.14	-1.8
2,897,473	+		MPMX19_02754	0.14	+0.9
2,897,473	+		MPMX19_02754	0.14	-0.9
2,897,473	+		MPMX19_02754	0.14	-0.1
2,897,473	+		MPMX19_02754	0.14	-0.6
2,897,473	+		MPMX19_02754	0.14	-0.2
2,897,474	-		MPMX19_02754	0.14	-0.7
2,897,474	-		MPMX19_02754	0.14	+0.4
2,897,474	-		MPMX19_02754	0.14	-1.1
2,897,474	-		MPMX19_02754	0.14	+0.3
2,897,474	-		MPMX19_02754	0.14	-0.8
2,897,474	-		MPMX19_02754	0.14	-2.2
2,897,474	-		MPMX19_02754	0.14	-0.3
2,897,474	-		MPMX19_02754	0.14	+0.1
2,897,474	-		MPMX19_02754	0.14	+1.4
2,897,474	-		MPMX19_02754	0.14	+0.8
2,897,474	-		MPMX19_02754	0.14	-0.3
2,897,524	+		MPMX19_02754	0.16	+1.3
2,897,524	+		MPMX19_02754	0.16	+0.7
2,897,525	-		MPMX19_02754	0.17	+0.7
2,897,692	+		MPMX19_02754	0.26	-0.1
2,897,692	+		MPMX19_02754	0.26	-0.3
2,897,692	+		MPMX19_02754	0.26	+0.4
2,897,692	+		MPMX19_02754	0.26	-0.3
2,897,692	+		MPMX19_02754	0.26	-0.9
2,897,692	+		MPMX19_02754	0.26	-0.0
2,897,692	+		MPMX19_02754	0.26	-1.9
2,897,692	+		MPMX19_02754	0.26	-0.3
2,897,692	+		MPMX19_02754	0.26	+0.3
2,897,692	+		MPMX19_02754	0.26	-0.7
2,897,692	+		MPMX19_02754	0.26	-0.5
2,897,693	-		MPMX19_02754	0.26	+0.3
2,897,693	-		MPMX19_02754	0.26	-1.9
2,897,693	-		MPMX19_02754	0.26	-0.3
2,897,693	-		MPMX19_02754	0.26	+0.1
2,897,693	-		MPMX19_02754	0.26	-0.7
2,897,693	-		MPMX19_02754	0.26	-1.3
2,897,884	+		MPMX19_02754	0.36	+0.7
2,897,884	+		MPMX19_02754	0.36	+0.1
2,897,885	-		MPMX19_02754	0.36	-0.9
2,897,885	-		MPMX19_02754	0.36	+0.3
2,897,885	-		MPMX19_02754	0.36	+0.3
2,897,885	-		MPMX19_02754	0.36	-0.7
2,897,885	-		MPMX19_02754	0.36	+1.2
2,897,923	+		MPMX19_02754	0.39	+0.3
2,897,924	-		MPMX19_02754	0.39	+1.3
2,897,924	-		MPMX19_02754	0.39	-0.6
2,897,924	-		MPMX19_02754	0.39	+0.3
2,897,924	-		MPMX19_02754	0.39	+0.7
2,897,924	-		MPMX19_02754	0.39	+0.1
2,897,924	-		MPMX19_02754	0.39	-1.1
2,897,941	+		MPMX19_02754	0.40	-0.1
2,897,941	+		MPMX19_02754	0.40	-0.9
2,897,942	-		MPMX19_02754	0.40	+0.7
2,897,942	-		MPMX19_02754	0.40	-0.5
2,897,942	-		MPMX19_02754	0.40	-0.3
2,897,942	-		MPMX19_02754	0.40	+0.4
2,897,942	-		MPMX19_02754	0.40	-1.3
2,897,942	-		MPMX19_02754	0.40	-0.1
2,898,005	-		MPMX19_02754	0.43	-1.7
2,898,005	-		MPMX19_02754	0.43	-0.9
2,898,007	+		MPMX19_02754	0.43	-0.1
2,898,007	+		MPMX19_02754	0.43	-0.7
2,898,007	+		MPMX19_02754	0.43	-0.7
2,898,008	-		MPMX19_02754	0.43	-0.1
2,898,064	+		MPMX19_02754	0.46	-2.5
2,898,301	+		MPMX19_02754	0.59	+1.2
2,898,301	+		MPMX19_02754	0.59	+3.0
2,898,301	+		MPMX19_02754	0.59	-0.7
2,898,301	+		MPMX19_02754	0.59	-1.0
2,898,301	+		MPMX19_02754	0.59	-0.7
2,898,301	+		MPMX19_02754	0.59	-4.0
2,898,301	+		MPMX19_02754	0.59	-1.3
2,898,301	+		MPMX19_02754	0.59	+0.5
2,898,301	+		MPMX19_02754	0.59	-0.8
2,898,301	+		MPMX19_02754	0.59	-0.9
2,898,301	+		MPMX19_02754	0.59	+0.2
2,898,301	+		MPMX19_02754	0.59	-0.3
2,898,301	+		MPMX19_02754	0.59	-0.3
2,898,301	+		MPMX19_02754	0.59	-0.5
2,898,301	+		MPMX19_02754	0.59	-0.7
2,898,301	+		MPMX19_02754	0.59	+0.3
2,898,301	+		MPMX19_02754	0.59	-0.3
2,898,301	+		MPMX19_02754	0.59	-0.1
2,898,301	+		MPMX19_02754	0.59	-1.3
2,898,301	+		MPMX19_02754	0.59	-1.9
2,898,301	+		MPMX19_02754	0.59	-2.1
2,898,301	+		MPMX19_02754	0.59	-0.3
2,898,301	+		MPMX19_02754	0.59	-0.6
2,898,301	+		MPMX19_02754	0.59	-1.7
2,898,301	+		MPMX19_02754	0.59	-0.3
2,898,301	+		MPMX19_02754	0.59	+0.2
2,898,302	-		MPMX19_02754	0.60	-0.6
2,898,302	-		MPMX19_02754	0.60	-0.1
2,898,302	-		MPMX19_02754	0.60	+0.3
2,898,302	-		MPMX19_02754	0.60	-0.2
2,898,302	-		MPMX19_02754	0.60	-1.1
2,898,302	-		MPMX19_02754	0.60	+1.1
2,898,302	-		MPMX19_02754	0.60	-0.0
2,898,302	-		MPMX19_02754	0.60	-1.3
2,898,302	-		MPMX19_02754	0.60	-0.3
2,898,302	-		MPMX19_02754	0.60	-1.1
2,898,302	-		MPMX19_02754	0.60	-1.7
2,898,302	-		MPMX19_02754	0.60	+0.1
2,898,302	-		MPMX19_02754	0.60	-0.7
2,898,302	-		MPMX19_02754	0.60	-0.7
2,898,302	-		MPMX19_02754	0.60	-2.7
2,898,302	-		MPMX19_02754	0.60	-1.3
2,898,302	-		MPMX19_02754	0.60	+0.3
2,898,302	-		MPMX19_02754	0.60	-1.1
2,898,302	-		MPMX19_02754	0.60	-1.3
2,898,302	-		MPMX19_02754	0.60	-1.9
2,898,302	-		MPMX19_02754	0.60	-0.9
2,898,302	-		MPMX19_02754	0.60	-0.6
2,898,302	-		MPMX19_02754	0.60	-0.9
2,898,302	-		MPMX19_02754	0.60	-0.6
2,898,302	-		MPMX19_02754	0.60	+0.1
2,898,302	-		MPMX19_02754	0.60	-0.9
2,898,302	-		MPMX19_02754	0.60	+0.1
2,898,304	+		MPMX19_02754	0.60	-0.3
2,898,304	+		MPMX19_02754	0.60	-0.6
2,898,304	+		MPMX19_02754	0.60	+0.1
2,898,304	+		MPMX19_02754	0.60	+3.5
2,898,304	+		MPMX19_02754	0.60	+0.1
2,898,304	+		MPMX19_02754	0.60	-0.3
2,898,304	+		MPMX19_02754	0.60	+0.0
2,898,305	-		MPMX19_02754	0.60	+0.4
2,898,305	-		MPMX19_02754	0.60	-1.7
2,898,305	-		MPMX19_02754	0.60	-0.9
2,898,305	-		MPMX19_02754	0.60	-0.6
2,898,305	-		MPMX19_02754	0.60	-0.3
2,898,436	-		MPMX19_02754	0.67	+0.3
2,898,751	+		MPMX19_02754	0.84	-0.1
2,898,751	+		MPMX19_02754	0.84	-1.7
2,898,751	+		MPMX19_02754	0.84	-1.3
2,898,752	-		MPMX19_02754	0.84	-1.2
2,898,752	-		MPMX19_02754	0.84	-0.1
2,898,752	-		MPMX19_02754	0.84	+1.5
2,898,754	+		MPMX19_02754	0.85	-0.3
2,898,754	+		MPMX19_02754	0.85	+1.3
2,898,754	+		MPMX19_02754	0.85	-0.7
2,898,754	+		MPMX19_02754	0.85	+0.3
2,898,754	+		MPMX19_02754	0.85	+0.9
2,898,754	+		MPMX19_02754	0.85	-0.9
2,898,754	+		MPMX19_02754	0.85	+0.4
2,898,754	+		MPMX19_02754	0.85	-0.0
2,898,755	-		MPMX19_02754	0.85	-1.3
2,898,755	-		MPMX19_02754	0.85	-1.7
2,898,755	-		MPMX19_02754	0.85	-3.9
2,898,755	-		MPMX19_02754	0.85	+0.3
2,898,755	-		MPMX19_02754	0.85	-0.9
2,898,755	-		MPMX19_02754	0.85	-0.3
2,898,755	-		MPMX19_02754	0.85	-0.3
2,898,755	-		MPMX19_02754	0.85	+0.7
2,898,755	-		MPMX19_02754	0.85	-0.7
2,898,755	-		MPMX19_02754	0.85	+0.1
2,898,757	+		MPMX19_02754	0.85	+0.3
2,898,757	+		MPMX19_02754	0.85	-0.7
2,898,757	+		MPMX19_02754	0.85	+0.7
2,898,757	+		MPMX19_02754	0.85	-1.3
2,898,757	+		MPMX19_02754	0.85	-2.3
2,898,757	+		MPMX19_02754	0.85	-0.7
2,898,758	-		MPMX19_02754	0.85	-2.5
2,898,758	-		MPMX19_02754	0.85	+0.1
2,898,758	-		MPMX19_02754	0.85	-0.3
2,898,787	-		MPMX19_02754	0.86	+0.2
2,898,916	+				+0.7
2,898,916	+				+0.1
2,898,916	+				+0.1
2,898,916	+				-0.5
2,898,916	+				-1.9
2,898,916	+				-0.3
2,898,916	+				-0.3
2,898,916	+				-1.8
2,898,916	+				+0.1
2,898,916	+				-0.3
2,898,916	+				-0.3
2,898,916	+				-0.2
2,898,916	+				-0.7
2,898,916	+				-0.5
2,898,916	+				-1.5
2,898,916	+				+1.1
2,898,916	+				-0.8
2,898,916	+				-1.8
2,898,916	+				-0.9
2,898,916	+				-0.0
2,898,916	+				-1.7
2,898,916	+				+0.2
2,898,916	+				-0.2
2,898,916	+				-1.9
2,898,916	+				-0.8
2,898,916	+				-0.9
2,898,916	+				-1.7
2,898,916	+				-0.7
2,898,916	+				-0.1
2,898,916	+				-1.8
2,898,916	+				-0.9
2,898,916	+				-1.3
2,898,916	+				-0.7
2,898,916	+				+0.5
2,898,916	+				-0.6
2,898,916	+				-1.3
2,898,916	+				-0.6
2,898,917	-				-0.5
2,898,917	-				-0.7
2,898,917	-				-0.6
2,898,917	-				-0.3
2,898,917	-				-0.2
2,898,917	-				+0.7
2,898,917	-				-0.2
2,898,917	-				-0.1
2,898,917	-				-0.1
2,898,917	-				+0.1
2,898,917	-				+0.4
2,898,917	-				-0.8
2,898,917	-				-0.9
2,898,917	-				-0.2
2,898,917	-				-0.3
2,898,917	-				-0.9
2,898,917	-				+0.4
2,898,917	-				-0.6
2,898,917	-				-1.1
2,898,917	-				-0.8
2,898,917	-				-1.0
2,898,917	-				-1.3
2,898,917	-				-0.3
2,898,917	-				+0.3
2,898,917	-				-0.1
2,898,917	-				-1.2
2,898,917	-				+1.3
2,898,917	-				-0.9
2,898,917	-				+0.6
2,898,917	-				-0.6
2,898,917	-				+0.7
2,898,917	-				-1.3
2,898,917	-				+0.3
2,898,917	-				+0.7
2,898,917	-				-0.7
2,898,917	-				-0.7
2,898,917	-				-0.3
2,898,917	-				+0.7
2,898,917	-				+0.5
2,898,917	-				-0.7
2,898,917	-				-1.9
2,898,917	-				-1.7
2,898,917	-				-1.3
2,898,917	-				-0.4
2,898,917	-				-0.7
2,898,918	+				+1.3
2,898,918	+				+0.7
2,898,918	+				+1.5
2,898,918	+				-0.4
2,898,918	+				+0.2
2,898,918	+				+0.7
2,898,918	+				+0.1
2,898,918	+				+0.1
2,898,918	+				-1.1
2,898,918	+				-0.7
2,898,918	+				-1.3
2,898,918	+				+1.7
2,898,918	+				-2.9
2,898,918	+				+0.0
2,898,918	+				-0.1
2,898,918	+				-0.4
2,898,918	+				-0.3
2,898,918	+				-0.1
2,898,918	+				-0.3
2,898,918	+				+0.3
2,898,918	+				+0.3
2,898,918	+				-1.4
2,898,918	+				-2.1
2,898,918	+				+0.4
2,898,918	+				-0.6
2,898,918	+				-2.8
2,898,918	+				+0.1
2,898,918	+				+0.7
2,898,919	-				-0.7
2,898,919	-				-1.5
2,898,919	-				-0.9
2,898,919	-				+0.1
2,898,919	-				-1.3
2,898,919	-				-0.9
2,898,919	-				+0.2
2,898,919	-				-1.2
2,898,919	-				-0.0
2,898,919	-				-0.1
2,898,919	-				-1.8
2,898,919	-				-0.9
2,898,919	-				+1.0
2,898,919	-				-1.3
2,898,919	-				-2.0
2,898,919	-				+0.9
2,898,919	-				+1.3
2,898,919	-				-1.3
2,898,919	-				-0.3
2,898,919	-				-1.7
2,898,919	-				+0.7
2,898,919	-				+0.3
2,898,919	-				+1.1
2,898,919	-				-0.4
2,898,919	-				-0.5
2,898,919	-				-1.7
2,898,919	-				+0.9
2,898,919	-				-0.6
2,898,919	-				+0.6
2,898,919	-				-2.3
2,898,919	-				+1.1
2,898,919	-				+0.8
2,898,919	-				-0.1
2,898,919	-				-0.1
2,898,919	-				+0.3
2,898,919	-				+1.2
2,898,931	+				+0.5
2,898,932	-				+0.3
2,898,932	-				+0.3
2,898,932	-				+0.3
2,898,932	-				+0.9
2,898,932	-				+0.3
2,898,997	+				-2.5
2,898,997	+				+1.7
2,898,997	+				-0.1
2,898,998	-				-2.3
2,898,998	-				-1.7
2,898,998	-				-0.3
2,899,030	+				-1.7
2,899,030	+				-1.9
2,899,045	+				+0.1
2,899,045	+				+2.3
2,899,045	+				-0.6
2,899,045	+				+0.4
2,899,045	+				-0.6
2,899,045	+				+0.3
2,899,045	+				+2.5
2,899,045	+				-0.7
2,899,045	+				+0.7
2,899,045	+				-2.3
2,899,045	+				-1.3
2,899,045	+				+0.7
2,899,045	+				-1.2
2,899,045	+				-1.9
2,899,046	-				-0.3
2,899,046	-				-0.2
2,899,046	-				-0.3
2,899,046	-				-0.1
2,899,046	-				-1.9
2,899,046	-				-0.1
2,899,046	-				-1.2
2,899,046	-				-1.3
2,899,334	+		MPMX19_02755	0.12	-0.3
2,899,334	+		MPMX19_02755	0.12	-1.3
2,899,334	+		MPMX19_02755	0.12	-1.9
2,899,334	+		MPMX19_02755	0.12	-1.3
2,899,334	+		MPMX19_02755	0.12	-1.4
2,899,335	-		MPMX19_02755	0.12	-0.3
2,899,335	-		MPMX19_02755	0.12	+0.3
2,899,335	-		MPMX19_02755	0.12	+0.7
2,899,335	-		MPMX19_02755	0.12	-0.9
2,899,335	-		MPMX19_02755	0.12	-1.5
2,899,433	+		MPMX19_02755	0.18	+0.5
2,899,433	+		MPMX19_02755	0.18	+0.7
2,899,433	+		MPMX19_02755	0.18	-0.1
2,899,433	+		MPMX19_02755	0.18	-0.0
2,899,433	+		MPMX19_02755	0.18	-1.7
2,899,433	+		MPMX19_02755	0.18	-1.5
2,899,433	+		MPMX19_02755	0.18	+1.0
2,899,434	-		MPMX19_02755	0.18	-0.2
2,899,434	-		MPMX19_02755	0.18	-0.1
2,899,434	-		MPMX19_02755	0.18	-0.8
2,899,434	-		MPMX19_02755	0.18	-1.3
2,899,434	-		MPMX19_02755	0.18	+1.3
2,899,434	-		MPMX19_02755	0.18	+1.9
2,899,553	+		MPMX19_02755	0.26	-1.7
2,899,553	+		MPMX19_02755	0.26	-0.7
2,899,553	+		MPMX19_02755	0.26	-1.5
2,899,553	+		MPMX19_02755	0.26	-0.7
2,899,553	+		MPMX19_02755	0.26	-0.3
2,899,553	+		MPMX19_02755	0.26	+0.7
2,899,553	+		MPMX19_02755	0.26	+0.3
2,899,554	-		MPMX19_02755	0.26	-0.1
2,899,554	-		MPMX19_02755	0.26	-2.0
2,899,554	-		MPMX19_02755	0.26	+1.3
2,899,554	-		MPMX19_02755	0.26	-0.3
2,899,554	-		MPMX19_02755	0.26	+0.2
2,899,554	-		MPMX19_02755	0.26	-2.1
2,899,554	-		MPMX19_02755	0.26	+0.3
2,899,554	-		MPMX19_02755	0.26	-0.9
2,899,554	-		MPMX19_02755	0.26	+1.1
2,899,554	-		MPMX19_02755	0.26	-0.7
2,899,778	+		MPMX19_02755	0.41	-0.3
2,899,778	+		MPMX19_02755	0.41	-1.9
2,899,778	+		MPMX19_02755	0.41	+0.4
2,899,778	+		MPMX19_02755	0.41	+0.1
2,899,778	+		MPMX19_02755	0.41	-0.1
2,899,778	+		MPMX19_02755	0.41	-0.7
2,899,779	-		MPMX19_02755	0.41	-0.8
2,899,779	-		MPMX19_02755	0.41	-0.3
2,899,779	-		MPMX19_02755	0.41	+0.0
2,899,779	-		MPMX19_02755	0.41	-0.7
2,899,895	+		MPMX19_02755	0.49	+0.9
2,899,895	+		MPMX19_02755	0.49	-0.6
2,899,895	+		MPMX19_02755	0.49	+0.3
2,899,895	+		MPMX19_02755	0.49	+0.7
2,899,895	+		MPMX19_02755	0.49	+1.0
2,899,895	+		MPMX19_02755	0.49	-0.3
2,899,895	+		MPMX19_02755	0.49	-1.7
2,899,895	+		MPMX19_02755	0.49	-0.5
2,899,896	-		MPMX19_02755	0.49	+0.4
2,899,896	-		MPMX19_02755	0.49	+0.9
2,899,896	-		MPMX19_02755	0.49	-0.7
2,899,896	-		MPMX19_02755	0.49	-1.7
2,899,896	-		MPMX19_02755	0.49	+0.1
2,899,896	-		MPMX19_02755	0.49	+0.2
2,899,896	-		MPMX19_02755	0.49	+0.7
2,899,896	-		MPMX19_02755	0.49	-0.1
2,899,896	-		MPMX19_02755	0.49	+0.2
2,899,896	-		MPMX19_02755	0.49	+0.7
2,899,896	-		MPMX19_02755	0.49	-0.1
2,899,896	-		MPMX19_02755	0.49	-0.4