Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01894

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,976,188	+				+0.1
1,976,188	+				+0.3
1,976,188	+				-1.5
1,976,254	+				-2.0
1,976,255	-				-0.8
1,976,255	-				+1.5
1,976,255	-				+1.0
1,976,255	-				+0.0
1,976,255	-				+0.5
1,976,316	+				-1.5
1,976,316	+				-0.1
1,976,316	+				+0.4
1,976,316	+				-0.1
1,976,316	+				-0.5
1,976,317	-				-0.4
1,976,391	+				-0.1
1,976,422	+				+1.0
1,976,423	-				-0.6
1,976,423	-				-0.5
1,976,425	+				+0.5
1,976,426	-				-1.0
1,976,426	-				+1.0
1,976,426	-				-0.8
1,976,445	-				+0.0
1,976,480	+				+1.8
1,976,542	+				-0.2
1,976,542	+				+1.0
1,976,542	+				+0.7
1,976,542	+				-0.6
1,976,542	+				+0.8
1,976,542	+				+0.6
1,976,542	+				+0.3
1,976,542	+				+0.0
1,976,542	+				-1.8
1,976,542	+				+0.0
1,976,542	+				-0.1
1,976,542	+				-0.4
1,976,542	+				+1.2
1,976,542	+				+1.0
1,976,542	+				+0.5
1,976,543	-				+0.2
1,976,543	-				+1.0
1,976,543	-				-1.9
1,976,543	-				+1.0
1,976,543	-				+0.2
1,976,543	-				-0.5
1,976,543	-				-0.1
1,976,543	-				+0.3
1,976,543	-				+1.6
1,976,543	-				-0.5
1,976,543	-				+0.2
1,976,543	-				-1.0
1,976,543	-				-2.9
1,976,543	-				+0.4
1,976,543	-				+0.6
1,976,543	-				-0.5
1,976,543	-				-0.2
1,976,545	+				-1.0
1,976,545	+				+1.0
1,976,545	+				+0.0
1,976,545	+				+0.3
1,976,545	+				-0.2
1,976,545	+				+0.4
1,976,545	+				-0.3
1,976,545	+				+0.6
1,976,545	+				-0.8
1,976,545	+				+0.6
1,976,546	-				-0.7
1,976,546	-				-1.3
1,976,546	-				+0.3
1,976,546	-				-0.3
1,976,667	-		MPMX19_01894	0.13	-1.0
1,976,667	-		MPMX19_01894	0.13	-0.1
1,976,707	+		MPMX19_01894	0.17	-0.3
1,976,707	+		MPMX19_01894	0.17	-0.5
1,976,707	+		MPMX19_01894	0.17	-1.4
1,976,707	+		MPMX19_01894	0.17	+0.0
1,976,707	+		MPMX19_01894	0.17	-0.3
1,976,707	+		MPMX19_01894	0.17	-0.4
1,976,707	+		MPMX19_01894	0.17	+0.7
1,976,707	+		MPMX19_01894	0.17	-0.1
1,976,707	+		MPMX19_01894	0.17	+0.0
1,976,707	+		MPMX19_01894	0.17	+0.5
1,976,707	+		MPMX19_01894	0.17	-1.0
1,976,707	+		MPMX19_01894	0.17	+0.3
1,976,707	+		MPMX19_01894	0.17	+1.0
1,976,707	+		MPMX19_01894	0.17	+0.2
1,976,707	+		MPMX19_01894	0.17	+0.5
1,976,708	-		MPMX19_01894	0.17	+0.1
1,976,708	-		MPMX19_01894	0.17	-0.3
1,976,708	-		MPMX19_01894	0.17	-0.1
1,976,708	-		MPMX19_01894	0.17	-1.3
1,976,708	-		MPMX19_01894	0.17	+0.0
1,976,708	-		MPMX19_01894	0.17	-1.0
1,976,708	-		MPMX19_01894	0.17	-2.1
1,976,708	-		MPMX19_01894	0.17	+1.0
1,976,708	-		MPMX19_01894	0.17	+0.0
1,976,708	-		MPMX19_01894	0.17	+0.2
1,976,708	-		MPMX19_01894	0.17	-0.2
1,977,614	+				-0.2
1,977,614	+				-0.2
1,977,614	+				+0.7
1,977,614	+				-2.1
1,977,614	+				+1.0
1,977,614	+				-0.3
1,977,615	-				+0.6
1,977,615	-				+1.6
1,977,615	-				-2.0
1,977,615	-				-0.4
1,977,615	-				-0.3
1,977,615	-				+1.0
1,977,615	-				-0.4
1,977,730	+		MPMX19_01895	0.10	+0.5
1,977,730	+		MPMX19_01895	0.10	-1.5
1,977,730	+		MPMX19_01895	0.10	+0.0
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	-0.3
1,977,730	+		MPMX19_01895	0.10	-0.8
1,977,730	+		MPMX19_01895	0.10	-0.1
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	+0.6
1,977,730	+		MPMX19_01895	0.10	-1.3
1,977,730	+		MPMX19_01895	0.10	+1.0
1,977,731	-		MPMX19_01895	0.10	-0.5
1,977,731	-		MPMX19_01895	0.10	-0.2
1,977,731	-		MPMX19_01895	0.10	-1.0
1,977,731	-		MPMX19_01895	0.10	+0.6
1,977,731	-		MPMX19_01895	0.10	-1.8
1,977,731	-		MPMX19_01895	0.10	+0.3
1,977,731	-		MPMX19_01895	0.10	-0.1
1,977,731	-		MPMX19_01895	0.10	+0.3
1,977,731	-		MPMX19_01895	0.10	-0.5
1,977,731	-		MPMX19_01895	0.10	+0.2
1,977,731	-		MPMX19_01895	0.10	+0.8
1,977,731	-		MPMX19_01895	0.10	+0.2
1,977,731	-		MPMX19_01895	0.10	+0.2
1,977,731	-		MPMX19_01895	0.10	-0.5
1,977,731	-		MPMX19_01895	0.10	+0.2
1,977,885	+		MPMX19_01895	0.48	-2.3
1,977,885	+		MPMX19_01895	0.48	+1.4
1,977,885	+		MPMX19_01895	0.48	-1.1
1,977,885	+		MPMX19_01895	0.48	+1.0
1,977,885	+		MPMX19_01895	0.48	-0.7
1,977,886	-		MPMX19_01895	0.48	-0.2
1,977,886	-		MPMX19_01895	0.48	+0.5
1,977,886	-		MPMX19_01895	0.48	+2.9
1,977,886	-		MPMX19_01895	0.48	+0.0
1,977,886	-		MPMX19_01895	0.48	-0.5
1,977,886	-		MPMX19_01895	0.48	-1.0
1,977,886	-		MPMX19_01895	0.48	-0.9
1,977,886	-		MPMX19_01895	0.48	-0.8
1,978,263	+		MPMX19_01896	0.11	+0.5
1,978,263	+		MPMX19_01896	0.11	-1.3
1,978,264	-		MPMX19_01896	0.11	-1.5
1,978,264	-		MPMX19_01896	0.11	-0.3
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+0.4
1,978,265	+		MPMX19_01896	0.11	-1.5
1,978,265	+		MPMX19_01896	0.11	-0.3
1,978,265	+		MPMX19_01896	0.11	+0.0
1,978,265	+		MPMX19_01896	0.11	-1.0
1,978,265	+		MPMX19_01896	0.11	-0.7
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	-0.8
1,978,265	+		MPMX19_01896	0.11	+1.0
1,978,266	-		MPMX19_01896	0.11	-0.7
1,978,266	-		MPMX19_01896	0.11	-0.5
1,978,266	-		MPMX19_01896	0.11	+1.3
1,978,266	-		MPMX19_01896	0.11	+0.5
1,978,266	-		MPMX19_01896	0.11	+1.6
1,978,266	-		MPMX19_01896	0.11	+0.8
1,978,266	-		MPMX19_01896	0.11	-1.7
1,978,266	-		MPMX19_01896	0.11	-1.8
1,978,266	-		MPMX19_01896	0.11	-0.6
1,978,266	-		MPMX19_01896	0.11	+0.7
1,978,301	+		MPMX19_01896	0.14	-1.5
1,978,301	+		MPMX19_01896	0.14	+0.7
1,978,301	+		MPMX19_01896	0.14	+1.5
1,978,301	+		MPMX19_01896	0.14	-0.5
1,978,301	+		MPMX19_01896	0.14	-0.8
1,978,302	-		MPMX19_01896	0.14	-0.4
1,978,302	-		MPMX19_01896	0.14	-2.0
1,978,302	-		MPMX19_01896	0.14	-0.7
1,978,302	-		MPMX19_01896	0.14	-0.4