Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01043

Experiment: NF_with_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with_fullN
1,082,693	+		MPMX19_01041	0.78	-0.5
1,082,693	+		MPMX19_01041	0.78	+2.1
1,082,693	+		MPMX19_01041	0.78	-0.5
1,082,694	-		MPMX19_01041	0.78	-0.6
1,082,694	-		MPMX19_01041	0.78	-0.6
1,082,694	-		MPMX19_01041	0.78	+0.1
1,082,729	+		MPMX19_01041	0.81	-0.2
1,082,729	+		MPMX19_01041	0.81	-0.5
1,082,729	+		MPMX19_01041	0.81	+0.1
1,082,729	+		MPMX19_01041	0.81	+0.6
1,082,729	+		MPMX19_01041	0.81	+1.1
1,082,729	+		MPMX19_01041	0.81	+0.3
1,082,729	+		MPMX19_01041	0.81	+0.3
1,082,729	+		MPMX19_01041	0.81	+0.1
1,082,729	+		MPMX19_01041	0.81	-0.9
1,082,729	+		MPMX19_01041	0.81	-0.4
1,082,729	+		MPMX19_01041	0.81	-0.9
1,082,729	+		MPMX19_01041	0.81	-0.3
1,082,729	+		MPMX19_01041	0.81	-1.2
1,082,729	+		MPMX19_01041	0.81	+1.1
1,082,730	-		MPMX19_01041	0.81	+0.5
1,082,730	-		MPMX19_01041	0.81	+0.7
1,082,730	-		MPMX19_01041	0.81	+0.8
1,082,730	-		MPMX19_01041	0.81	-0.9
1,082,730	-		MPMX19_01041	0.81	+0.4
1,082,730	-		MPMX19_01041	0.81	-0.8
1,082,730	-		MPMX19_01041	0.81	+0.6
1,082,730	-		MPMX19_01041	0.81	-0.5
1,082,730	-		MPMX19_01041	0.81	-0.2
1,082,730	-		MPMX19_01041	0.81	-2.2
1,082,730	-		MPMX19_01041	0.81	-1.5
1,082,730	-		MPMX19_01041	0.81	+1.1
1,082,730	-		MPMX19_01041	0.81	+1.7
1,082,730	-		MPMX19_01041	0.81	+0.1
1,082,730	-		MPMX19_01041	0.81	-0.9
1,082,730	-		MPMX19_01041	0.81	+0.2
1,082,730	-		MPMX19_01041	0.81	+0.3
1,082,730	-		MPMX19_01041	0.81	+0.5
1,082,834	+		MPMX19_01041	0.90	-0.4
1,082,835	-		MPMX19_01041	0.90	-0.9
1,082,977	+				-0.3
1,082,977	+				-0.2
1,082,977	+				-2.0
1,082,978	-				-0.9
1,082,978	-				-0.2
1,083,106	+				-0.7
1,083,106	+				-1.2
1,083,107	-				+0.8
1,083,107	-				-1.9
1,083,107	-				-1.8
1,083,107	-				-0.3
1,083,169	+				+0.1
1,083,276	+		MPMX19_01042	0.27	-0.2
1,083,440	+		MPMX19_01042	0.59	-0.8
1,083,440	+		MPMX19_01042	0.59	-1.5
1,083,558	+		MPMX19_01042	0.83	-0.9
1,083,558	+		MPMX19_01042	0.83	-1.5
1,083,558	+		MPMX19_01042	0.83	+1.7
1,083,558	+		MPMX19_01042	0.83	+0.4
1,083,558	+		MPMX19_01042	0.83	+0.8
1,083,558	+		MPMX19_01042	0.83	-0.8
1,083,558	+		MPMX19_01042	0.83	-0.7
1,083,559	-		MPMX19_01042	0.83	-1.5
1,083,559	-		MPMX19_01042	0.83	-0.1
1,083,559	-		MPMX19_01042	0.83	-0.0
1,083,559	-		MPMX19_01042	0.83	-0.4
1,083,559	-		MPMX19_01042	0.83	-0.4
1,083,559	-		MPMX19_01042	0.83	+1.1
1,083,559	-		MPMX19_01042	0.83	-0.2
1,083,643	+				-1.1
1,083,643	+				-1.6
1,083,643	+				+0.4
1,083,643	+				-0.9
1,083,644	-				-0.1
1,083,644	-				+1.1
1,083,658	+				-0.4
1,083,658	+				+0.8
1,083,658	+				-0.8
1,083,658	+				+0.6
1,083,658	+				-1.4
1,083,658	+				-1.1
1,083,658	+				+0.3
1,083,658	+				+0.1
1,083,659	+				-1.2
1,083,659	-				-1.7
1,083,659	-				-1.1
1,083,659	-				-0.5
1,083,659	-				-0.5
1,083,659	-				-1.5
1,083,659	-				-1.8
1,083,659	-				+1.8
1,083,659	-				+0.2
1,083,659	-				-0.4
1,083,659	-				-0.5
1,083,662	+				+0.6
1,083,662	+				-0.2
1,083,662	+				-1.2
1,083,662	+				+1.4
1,083,662	+				-0.9
1,083,663	-				-0.6
1,083,663	-				+0.1
1,083,663	-				-0.6
1,083,663	-				-0.5
1,083,663	-				-0.7
1,083,663	-				-0.5
1,083,807	+		MPMX19_01043	0.19	-0.2
1,083,807	+		MPMX19_01043	0.19	-2.6
1,083,807	+		MPMX19_01043	0.19	+0.8
1,083,807	+		MPMX19_01043	0.19	-0.0
1,083,807	+		MPMX19_01043	0.19	-1.1
1,083,807	+		MPMX19_01043	0.19	+1.2
1,083,807	+		MPMX19_01043	0.19	+0.6
1,083,807	+		MPMX19_01043	0.19	-0.8
1,083,807	+		MPMX19_01043	0.19	+0.3
1,083,808	-		MPMX19_01043	0.20	-1.0
1,083,808	-		MPMX19_01043	0.20	-1.4
1,083,808	-		MPMX19_01043	0.20	+0.1
1,083,808	-		MPMX19_01043	0.20	+1.1
1,083,808	-		MPMX19_01043	0.20	+0.2
1,083,808	-		MPMX19_01043	0.20	-0.2
1,083,808	-		MPMX19_01043	0.20	-1.2
1,083,808	-		MPMX19_01043	0.20	-0.3
1,083,808	-		MPMX19_01043	0.20	+0.1
1,083,808	-		MPMX19_01043	0.20	-1.2
1,083,812	+		MPMX19_01043	0.20	+0.5
1,083,813	-		MPMX19_01043	0.20	+0.8
1,083,848	+		MPMX19_01043	0.26	+0.5
1,083,848	+		MPMX19_01043	0.26	-1.2
1,083,848	+		MPMX19_01043	0.26	-1.1
1,083,848	+		MPMX19_01043	0.26	-0.4
1,083,848	+		MPMX19_01043	0.26	+0.1
1,083,848	+		MPMX19_01043	0.26	+1.1
1,083,848	+		MPMX19_01043	0.26	+0.1
1,083,849	-		MPMX19_01043	0.26	-0.5
1,083,849	-		MPMX19_01043	0.26	-0.5
1,083,849	-		MPMX19_01043	0.26	-1.2
1,083,849	-		MPMX19_01043	0.26	-1.5
1,083,863	+		MPMX19_01043	0.28	-0.0
1,083,863	+		MPMX19_01043	0.28	-0.1
1,083,863	+		MPMX19_01043	0.28	+0.1
1,083,863	+		MPMX19_01043	0.28	+0.9
1,083,863	+		MPMX19_01043	0.28	-0.2
1,083,863	+		MPMX19_01043	0.28	+0.4
1,083,863	+		MPMX19_01043	0.28	-1.7
1,083,863	+		MPMX19_01043	0.28	+0.5
1,083,863	+		MPMX19_01043	0.28	+0.0
1,083,863	+		MPMX19_01043	0.28	-1.2
1,083,863	+		MPMX19_01043	0.28	-1.5
1,083,863	+		MPMX19_01043	0.28	-0.3
1,083,863	+		MPMX19_01043	0.28	-0.7
1,083,863	+		MPMX19_01043	0.28	-1.1
1,083,863	+		MPMX19_01043	0.28	-1.7
1,083,864	-		MPMX19_01043	0.28	-1.1
1,083,864	-		MPMX19_01043	0.28	-2.0
1,083,864	-		MPMX19_01043	0.28	-0.5
1,083,864	-		MPMX19_01043	0.28	-0.9
1,083,864	-		MPMX19_01043	0.28	-1.1
1,083,864	-		MPMX19_01043	0.28	-0.7
1,083,864	-		MPMX19_01043	0.28	-0.3
1,083,864	-		MPMX19_01043	0.28	-0.8
1,083,864	-		MPMX19_01043	0.28	+0.3
1,083,864	-		MPMX19_01043	0.28	-1.1
1,084,009	+		MPMX19_01043	0.50	-0.7
1,084,009	+		MPMX19_01043	0.50	-1.5
1,084,166	+		MPMX19_01043	0.74	+0.6
1,084,166	+		MPMX19_01043	0.74	-0.2
1,084,166	+		MPMX19_01043	0.74	+1.1
1,084,166	+		MPMX19_01043	0.74	-2.2
1,084,166	+		MPMX19_01043	0.74	-1.5
1,084,166	+		MPMX19_01043	0.74	-0.7
1,084,167	-		MPMX19_01043	0.74	+1.1
1,084,167	-		MPMX19_01043	0.74	+0.4
1,084,167	-		MPMX19_01043	0.74	-1.5
1,084,167	-		MPMX19_01043	0.74	-0.3
1,084,167	-		MPMX19_01043	0.74	+0.2
1,084,269	+		MPMX19_01043	0.90	+0.9
1,084,269	+		MPMX19_01043	0.90	-0.4
1,084,269	+		MPMX19_01043	0.90	+0.2
1,084,270	-				+0.7
1,084,409	+				-0.5
1,084,409	+				-1.2
1,084,409	+				-0.2
1,084,409	+				-0.2
1,084,410	-				-1.4
1,084,410	-				-0.2
1,084,410	-				+0.1
1,084,410	-				-0.9
1,084,410	-				-0.1
1,084,514	+				+0.8
1,084,555	+				-0.2
1,084,556	-				+0.4
1,084,559	+				-1.7
1,084,559	+				-0.4
1,084,559	+				-0.4
1,084,560	-				-0.9
1,084,560	-				+1.6
1,084,577	+				-0.7
1,084,577	+				+0.0
1,084,577	+				-0.2
1,084,613	-				-1.2
1,084,639	-				-0.5
1,084,665	+				+2.3
1,084,665	+				+2.1
1,084,670	+				+1.1
1,084,670	+				-0.7
1,084,670	+				+1.1
1,084,670	+				-0.9
1,084,670	+				+0.1
1,084,670	+				-0.1
1,084,671	-				-0.4
1,084,671	-				-0.8
1,084,671	-				-0.9
1,084,679	+				+1.3
1,084,691	-				-0.6
1,084,753	+		MPMX19_01044	0.15	+0.6
1,084,753	+		MPMX19_01044	0.15	-0.6
1,084,753	+		MPMX19_01044	0.15	-1.9
1,084,754	-		MPMX19_01044	0.16	-0.4
1,084,761	+		MPMX19_01044	0.20	+0.5
1,084,762	-		MPMX19_01044	0.20	+0.1
1,084,762	-		MPMX19_01044	0.20	+0.1
1,084,786	+		MPMX19_01044	0.35	+1.7
1,084,786	+		MPMX19_01044	0.35	-1.0
1,084,786	+		MPMX19_01044	0.35	-0.3
1,084,786	+		MPMX19_01044	0.35	+1.1
1,084,786	+		MPMX19_01044	0.35	-1.5
1,084,786	+		MPMX19_01044	0.35	+1.5
1,084,786	+		MPMX19_01044	0.35	+1.8
1,084,786	+		MPMX19_01044	0.35	-2.2
1,084,786	+		MPMX19_01044	0.35	-0.2
1,084,787	-		MPMX19_01044	0.35	+0.7
1,084,787	-		MPMX19_01044	0.35	+0.5
1,084,787	-		MPMX19_01044	0.35	-0.3
1,084,787	-		MPMX19_01044	0.35	-0.8
1,084,787	-		MPMX19_01044	0.35	-1.0
1,084,787	-		MPMX19_01044	0.35	-1.1
1,084,787	-		MPMX19_01044	0.35	-0.4
1,084,787	-		MPMX19_01044	0.35	-0.5
1,084,787	-		MPMX19_01044	0.35	+1.8
1,084,858	+		MPMX19_01044	0.77	-0.3
1,084,858	+		MPMX19_01044	0.77	-0.1
1,084,858	+		MPMX19_01044	0.77	-0.5
1,084,858	+		MPMX19_01044	0.77	-0.5
1,084,858	+		MPMX19_01044	0.77	-0.5
1,084,858	+		MPMX19_01044	0.77	-0.5
1,084,859	-		MPMX19_01044	0.77	+0.1
1,084,965	+				-1.4
1,084,965	+				+0.5
1,084,965	+				+0.3
1,084,965	+				-0.7
1,084,966	-				-0.9
1,084,966	-				-0.2
1,084,966	-				+0.7
1,085,153	+		MPMX19_01045	0.12	-1.0
1,085,153	+		MPMX19_01045	0.12	+0.1
1,085,153	+		MPMX19_01045	0.12	-0.3
1,085,153	+		MPMX19_01045	0.12	+1.4
1,085,153	+		MPMX19_01045	0.12	-0.5
1,085,153	+		MPMX19_01045	0.12	-1.2
1,085,153	+		MPMX19_01045	0.12	-0.1
1,085,154	-		MPMX19_01045	0.12	+1.7
1,085,154	-		MPMX19_01045	0.12	+0.2
1,085,154	-		MPMX19_01045	0.12	-0.1
1,085,154	-		MPMX19_01045	0.12	-1.3
1,085,154	-		MPMX19_01045	0.12	+0.5
1,085,243	+		MPMX19_01045	0.19	+2.1
1,085,243	+		MPMX19_01045	0.19	+0.5
1,085,243	+		MPMX19_01045	0.19	+0.5