Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03812

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
48,040	+		MPMX19_03811	0.11	-2.1
48,305	+		MPMX19_03811	0.35	+0.3
48,305	+		MPMX19_03811	0.35	+0.0
48,305	+		MPMX19_03811	0.35	-0.2
48,305	+		MPMX19_03811	0.35	-1.0
48,305	+		MPMX19_03811	0.35	-1.2
48,305	+		MPMX19_03811	0.35	+0.1
48,305	+		MPMX19_03811	0.35	+1.3
48,306	-		MPMX19_03811	0.36	-1.0
48,306	-		MPMX19_03811	0.36	-0.2
48,405	+		MPMX19_03811	0.45	-0.5
48,615	+		MPMX19_03811	0.64	-1.0
48,615	+		MPMX19_03811	0.64	+1.3
48,731	+		MPMX19_03811	0.74	-1.0
48,732	-		MPMX19_03811	0.74	-0.0
48,732	-		MPMX19_03811	0.74	+0.3
48,854	+		MPMX19_03811	0.86	-1.5
48,855	-		MPMX19_03811	0.86	-1.2
48,855	-		MPMX19_03811	0.86	+1.9
48,855	-		MPMX19_03811	0.86	+0.1
48,916	+				-0.8
48,917	-				+0.7
48,917	-				-1.7
48,973	+				-1.2
48,973	+				-1.0
48,974	-				+0.6
48,974	-				-2.4
49,009	+				-1.6
49,009	+				-0.0
49,009	+				-0.7
49,009	+				-0.7
49,010	-				-1.0
49,067	-				-0.2
49,067	-				-0.2
49,067	-				-0.1
49,068	-				-0.4
49,094	+				-0.2
49,094	+				-0.7
49,094	+				+0.5
49,095	-				+1.6
49,095	-				-0.3
49,095	-				-0.2
49,095	-				-0.2
49,095	-				-1.2
49,152	-				+0.6
49,152	-				+0.2
49,249	+		MPMX19_03812	0.15	-1.5
49,249	+		MPMX19_03812	0.15	-1.0
49,249	+		MPMX19_03812	0.15	-0.2
49,249	+		MPMX19_03812	0.15	-0.0
49,249	+		MPMX19_03812	0.15	-1.0
49,249	+		MPMX19_03812	0.15	-0.7
49,249	+		MPMX19_03812	0.15	-0.2
49,249	+		MPMX19_03812	0.15	-2.0
49,250	-		MPMX19_03812	0.15	-0.4
49,250	-		MPMX19_03812	0.15	-1.2
49,268	+		MPMX19_03812	0.16	-0.5
49,268	+		MPMX19_03812	0.16	-0.2
49,268	+		MPMX19_03812	0.16	-0.7
49,268	+		MPMX19_03812	0.16	-0.3
49,268	+		MPMX19_03812	0.16	+1.3
49,268	+		MPMX19_03812	0.16	-0.1
49,268	+		MPMX19_03812	0.16	+1.2
49,268	+		MPMX19_03812	0.16	-0.6
49,268	+		MPMX19_03812	0.16	-0.2
49,268	+		MPMX19_03812	0.16	-1.6
49,268	+		MPMX19_03812	0.16	-1.2
49,268	+		MPMX19_03812	0.16	-1.0
49,268	+		MPMX19_03812	0.16	-0.4
49,269	-		MPMX19_03812	0.16	-1.5
49,269	-		MPMX19_03812	0.16	+0.3
49,269	-		MPMX19_03812	0.16	-1.9
49,269	-		MPMX19_03812	0.16	-0.2
49,269	-		MPMX19_03812	0.16	+0.4
49,269	-		MPMX19_03812	0.16	-0.8
49,269	-		MPMX19_03812	0.16	-0.7
49,269	-		MPMX19_03812	0.16	-0.7
49,269	-		MPMX19_03812	0.16	-0.2
49,389	-		MPMX19_03812	0.24	-1.3
49,433	+		MPMX19_03812	0.27	+1.0
49,433	+		MPMX19_03812	0.27	-0.1
49,434	-		MPMX19_03812	0.27	+0.9
49,625	+		MPMX19_03812	0.39	-0.7
49,625	+		MPMX19_03812	0.39	-1.5
49,626	-		MPMX19_03812	0.39	+0.3
49,626	-		MPMX19_03812	0.39	-0.2
49,661	+		MPMX19_03812	0.42	+1.8
49,661	+		MPMX19_03812	0.42	-0.4
49,661	+		MPMX19_03812	0.42	-0.7
49,662	-		MPMX19_03812	0.42	-0.6
49,662	-		MPMX19_03812	0.42	+1.3
49,666	+		MPMX19_03812	0.42	-1.2
49,667	-		MPMX19_03812	0.42	+1.1
49,667	-		MPMX19_03812	0.42	-0.1
49,748	+		MPMX19_03812	0.47	-1.2
49,748	+		MPMX19_03812	0.47	-1.2
49,748	+		MPMX19_03812	0.47	-1.0
49,748	+		MPMX19_03812	0.47	-0.8
49,748	+		MPMX19_03812	0.47	-0.5
49,748	+		MPMX19_03812	0.47	-1.0
49,749	-		MPMX19_03812	0.47	-0.7
49,749	-		MPMX19_03812	0.47	+2.3
49,749	-		MPMX19_03812	0.47	-0.5
49,749	-		MPMX19_03812	0.47	-1.5
49,749	-		MPMX19_03812	0.47	-0.1
49,749	-		MPMX19_03812	0.47	+0.6
49,749	-		MPMX19_03812	0.47	+1.7
49,931	+		MPMX19_03812	0.59	-1.0
49,931	+		MPMX19_03812	0.59	-0.6
49,932	-		MPMX19_03812	0.59	+0.5
50,081	+		MPMX19_03812	0.69	-0.7
50,081	+		MPMX19_03812	0.69	+2.1
50,081	+		MPMX19_03812	0.69	-0.2
50,082	-		MPMX19_03812	0.69	-0.7
50,082	-		MPMX19_03812	0.69	-0.2
50,082	-		MPMX19_03812	0.69	+0.0
50,165	+		MPMX19_03812	0.74	+0.3
50,165	+		MPMX19_03812	0.74	+0.3
50,166	-		MPMX19_03812	0.74	+0.3
50,288	+		MPMX19_03812	0.82	-0.7
50,288	+		MPMX19_03812	0.82	+0.0
50,288	+		MPMX19_03812	0.82	+0.0
50,288	+		MPMX19_03812	0.82	-0.2
50,289	-		MPMX19_03812	0.82	+0.3
50,289	-		MPMX19_03812	0.82	+1.3
50,324	+		MPMX19_03812	0.84	+0.0
50,324	+		MPMX19_03812	0.84	+0.2
50,324	+		MPMX19_03812	0.84	-0.5
50,324	+		MPMX19_03812	0.84	+1.1
50,324	+		MPMX19_03812	0.84	-0.7
50,324	+		MPMX19_03812	0.84	+1.3
50,325	-		MPMX19_03812	0.85	-0.2
50,325	-		MPMX19_03812	0.85	-1.1
50,349	+		MPMX19_03812	0.86	+0.0
50,350	-		MPMX19_03812	0.86	-2.1
50,350	-		MPMX19_03812	0.86	-0.7
50,399	+		MPMX19_03812	0.89	-2.2
50,400	-		MPMX19_03812	0.89	-0.2
50,400	-		MPMX19_03812	0.89	+0.3
50,400	-		MPMX19_03812	0.89	-1.0
50,463	-				-0.7
50,571	+				-1.1
50,571	+				-0.9
50,571	+				-0.8
50,572	-				+1.3
50,572	-				-0.8
50,572	-				+2.1
50,572	-				+0.8
50,572	-				+0.3
50,590	+				-0.9
50,746	-		MPMX19_03813	0.24	-1.1
50,746	-		MPMX19_03813	0.24	+0.4
50,839	+		MPMX19_03813	0.36	-1.4
50,839	+		MPMX19_03813	0.36	-1.1
50,840	-		MPMX19_03813	0.36	-0.2
50,840	-		MPMX19_03813	0.36	+0.6
50,844	+		MPMX19_03813	0.36	+1.3
50,844	+		MPMX19_03813	0.36	+0.0
50,845	-		MPMX19_03813	0.36	+0.0
50,853	+		MPMX19_03813	0.37	-2.4
50,854	-		MPMX19_03813	0.38	-1.0
50,854	-		MPMX19_03813	0.38	+0.8
50,884	+		MPMX19_03813	0.41	-1.5
50,884	+		MPMX19_03813	0.41	-0.0
50,884	+		MPMX19_03813	0.41	-1.7
50,884	+		MPMX19_03813	0.41	+0.0
50,884	+		MPMX19_03813	0.41	-0.2
50,885	-		MPMX19_03813	0.42	-1.7
50,885	-		MPMX19_03813	0.42	-0.2
50,885	-		MPMX19_03813	0.42	-1.7
50,885	-		MPMX19_03813	0.42	-0.9
50,885	-		MPMX19_03813	0.42	-1.7
50,935	+		MPMX19_03813	0.48	+0.3
50,935	+		MPMX19_03813	0.48	-0.8
50,935	+		MPMX19_03813	0.48	-1.5
50,935	+		MPMX19_03813	0.48	-1.7
50,935	+		MPMX19_03813	0.48	+0.2
50,935	+		MPMX19_03813	0.48	+0.2
50,935	+		MPMX19_03813	0.48	+0.5
50,936	-		MPMX19_03813	0.48	+1.3
50,936	-		MPMX19_03813	0.48	+2.1
50,936	-		MPMX19_03813	0.48	-1.5
50,936	-		MPMX19_03813	0.48	+0.9
50,936	-		MPMX19_03813	0.48	+0.9
50,936	-		MPMX19_03813	0.48	-0.2
50,936	-		MPMX19_03813	0.48	-0.6
50,936	-		MPMX19_03813	0.48	+0.9
50,936	-		MPMX19_03813	0.48	+0.3
50,936	-		MPMX19_03813	0.48	-0.1
50,980	+		MPMX19_03813	0.54	+1.0
50,980	+		MPMX19_03813	0.54	+0.1
50,980	+		MPMX19_03813	0.54	+0.3
50,980	+		MPMX19_03813	0.54	-0.7
50,980	+		MPMX19_03813	0.54	-1.0
50,980	+		MPMX19_03813	0.54	-0.7
50,980	+		MPMX19_03813	0.54	-1.2
50,981	-		MPMX19_03813	0.54	+0.9
50,981	-		MPMX19_03813	0.54	+0.9
50,981	-		MPMX19_03813	0.54	+0.9
50,981	-		MPMX19_03813	0.54	-1.5
50,981	-		MPMX19_03813	0.54	-0.2
50,981	-		MPMX19_03813	0.54	-0.1
50,981	-		MPMX19_03813	0.54	+1.5
50,981	-		MPMX19_03813	0.54	-1.1
50,981	-		MPMX19_03813	0.54	+0.0
50,981	-		MPMX19_03813	0.54	+1.0
50,981	-		MPMX19_03813	0.54	-1.5
50,981	-		MPMX19_03813	0.54	+0.8
50,981	-		MPMX19_03813	0.54	-1.5
50,981	-		MPMX19_03813	0.54	+0.3
50,981	-		MPMX19_03813	0.54	-1.5
50,981	-		MPMX19_03813	0.54	-1.5
50,981	-		MPMX19_03813	0.54	-1.0
50,981	-		MPMX19_03813	0.54	-0.2
50,981	-		MPMX19_03813	0.54	+0.0
51,177	+		MPMX19_03813	0.79	+0.0
51,177	+		MPMX19_03813	0.79	-0.9
51,177	+		MPMX19_03813	0.79	-0.1
51,177	+		MPMX19_03813	0.79	+0.1
51,177	-		MPMX19_03813	0.79	-1.0
51,178	-		MPMX19_03813	0.79	-0.9
51,178	-		MPMX19_03813	0.79	+0.1
51,178	-		MPMX19_03813	0.79	-1.8
51,178	-		MPMX19_03813	0.79	+0.9
51,178	-		MPMX19_03813	0.79	+0.0
51,289	+				-0.2
51,289	+				-0.1
51,298	+				+1.2
51,298	+				-0.8
51,298	+				+0.3
51,298	+				+1.5
51,299	-				-0.8
51,334	+				-0.7
51,334	+				-1.2
51,334	+				+0.3
51,334	+				-1.8
51,334	+				-0.7
51,334	+				-0.1
51,335	-				-1.7
51,335	-				-0.2
51,335	-				+0.3
51,464	+		MPMX19_03814	0.11	-1.6
51,464	+		MPMX19_03814	0.11	+1.1
51,464	+		MPMX19_03814	0.11	+0.1
51,464	+		MPMX19_03814	0.11	-0.2
51,465	-		MPMX19_03814	0.11	-0.7
51,465	-		MPMX19_03814	0.11	+1.1
51,465	-		MPMX19_03814	0.11	-0.7
51,465	-		MPMX19_03814	0.11	+0.3
51,468	-		MPMX19_03814	0.11	-1.0
51,468	-		MPMX19_03814	0.11	-0.2
51,468	-		MPMX19_03814	0.11	+0.8
51,512	+		MPMX19_03814	0.15	-2.0
51,512	+		MPMX19_03814	0.15	-2.5
51,512	+		MPMX19_03814	0.15	-0.3
51,512	+		MPMX19_03814	0.15	-0.5
51,512	+		MPMX19_03814	0.15	+1.0
51,512	+		MPMX19_03814	0.15	-0.2
51,513	-		MPMX19_03814	0.15	-0.5
51,513	-		MPMX19_03814	0.15	-1.5
51,513	-		MPMX19_03814	0.15	-1.5
51,513	-		MPMX19_03814	0.15	-0.5
51,513	-		MPMX19_03814	0.15	+1.3