Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02736

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,880,030	+		MPMX19_02735	0.79	-0.8
2,880,031	-		MPMX19_02735	0.79	+0.8
2,880,031	-		MPMX19_02735	0.79	-1.2
2,880,253	+				+0.9
2,880,253	+				-0.9
2,880,253	+				-1.0
2,880,253	+				+0.8
2,880,253	+				-1.6
2,880,253	+				-0.8
2,880,253	+				-0.5
2,880,253	+				-1.1
2,880,253	+				+0.7
2,880,253	+				-0.8
2,880,253	+				-1.4
2,880,253	+				+0.5
2,880,253	+				+1.9
2,880,253	+				-0.1
2,880,253	+				-0.4
2,880,253	+				-2.5
2,880,253	+				-1.5
2,880,253	+				-1.4
2,880,253	+				+0.1
2,880,253	+				-0.8
2,880,253	+				-0.7
2,880,253	+				+0.8
2,880,253	+				+0.2
2,880,253	+				+0.6
2,880,254	-				-0.0
2,880,254	-				-1.6
2,880,254	-				-1.0
2,880,254	-				-0.6
2,880,254	-				-2.6
2,880,254	-				-0.1
2,880,254	-				-0.1
2,880,254	-				-0.5
2,880,254	-				+1.0
2,880,254	-				-1.8
2,880,254	-				-2.3
2,880,254	-				-2.1
2,880,254	-				-1.6
2,880,254	-				-0.2
2,880,254	-				+1.6
2,880,254	-				+1.6
2,880,254	-				+1.5
2,880,254	-				-0.8
2,880,254	-				-1.0
2,880,254	-				-1.0
2,880,254	-				-1.0
2,880,254	-				-1.1
2,880,254	-				+0.2
2,880,254	-				-0.2
2,880,254	-				-1.8
2,880,254	-				-1.1
2,880,254	-				-1.6
2,880,254	-				-1.2
2,880,255	+				-0.8
2,880,255	+				-1.1
2,880,255	+				-1.1
2,880,255	+				-2.0
2,880,255	+				-1.3
2,880,255	+				-1.4
2,880,255	+				+0.5
2,880,256	-				+0.6
2,880,256	-				-2.3
2,880,256	-				-0.8
2,880,256	-				-0.5
2,880,256	-				-0.8
2,880,293	+				-1.0
2,880,293	+				+1.2
2,880,293	+				-1.6
2,880,293	+				-2.3
2,880,293	+				+2.8
2,880,293	+				-1.0
2,880,293	+				-0.4
2,880,293	+				-2.7
2,880,293	+				-1.4
2,880,293	+				-0.4
2,880,293	+				-1.9
2,880,293	+				-0.4
2,880,293	+				+0.9
2,880,293	+				+0.2
2,880,293	+				+0.2
2,880,293	+				-0.1
2,880,293	+				-0.5
2,880,293	+				-2.3
2,880,293	+				-0.4
2,880,293	+				+0.5
2,880,293	+				+0.8
2,880,294	-				-0.4
2,880,294	-				-0.5
2,880,294	-				-1.6
2,880,294	-				+0.2
2,880,294	-				-1.0
2,880,294	-				-1.4
2,880,294	-				+0.2
2,880,294	-				-0.8
2,880,294	-				-1.1
2,880,294	-				+1.2
2,880,294	-				-0.9
2,880,294	-				-0.4
2,880,294	-				-1.6
2,880,294	-				-0.4
2,880,294	-				-0.8
2,880,294	-				-0.0
2,880,294	-				+0.5
2,880,294	-				+3.0
2,880,294	-				-0.8
2,880,294	-				+0.5
2,880,294	-				-1.4
2,880,308	+				-1.1
2,880,308	+				-0.6
2,880,308	+				-0.1
2,880,308	+				-0.4
2,880,308	+				+0.8
2,880,308	+				-0.4
2,880,308	+				-1.0
2,880,308	+				-1.6
2,880,308	+				-0.1
2,880,309	-				+2.2
2,880,309	-				+2.7
2,880,309	-				+0.9
2,880,309	-				+2.2
2,880,309	-				+1.8
2,880,309	-				+1.8
2,880,359	-				+1.2
2,880,463	+				+1.6
2,880,463	+				-0.4
2,880,463	+				+1.8
2,880,463	+				-0.4
2,880,464	-				+2.2
2,880,464	-				+0.2
2,880,464	-				+1.2
2,880,464	-				+0.2
2,880,622	+		MPMX19_02736	0.15	+1.2
2,880,622	+		MPMX19_02736	0.15	+2.2
2,880,622	+		MPMX19_02736	0.15	+1.2
2,880,622	+		MPMX19_02736	0.15	+1.9
2,880,622	+		MPMX19_02736	0.15	+1.2
2,880,622	+		MPMX19_02736	0.15	+1.2
2,880,623	-		MPMX19_02736	0.15	-0.4
2,880,623	-		MPMX19_02736	0.15	+1.2
2,880,623	-		MPMX19_02736	0.15	+1.2
2,880,646	+		MPMX19_02736	0.17	-0.4
2,880,646	+		MPMX19_02736	0.17	+0.6
2,880,646	+		MPMX19_02736	0.17	-0.4
2,880,646	+		MPMX19_02736	0.17	+2.2
2,880,650	-		MPMX19_02736	0.17	+0.2
2,880,691	+		MPMX19_02736	0.20	+2.2
2,880,691	+		MPMX19_02736	0.20	+2.2
2,880,691	+		MPMX19_02736	0.20	+0.6
2,880,691	+		MPMX19_02736	0.20	+0.2
2,880,692	-		MPMX19_02736	0.20	+3.2
2,880,692	-		MPMX19_02736	0.20	+1.2
2,880,692	-		MPMX19_02736	0.20	+1.2
2,880,692	-		MPMX19_02736	0.20	+2.2
2,880,847	+		MPMX19_02736	0.33	+0.6
2,880,848	-		MPMX19_02736	0.33	+1.2
2,880,848	-		MPMX19_02736	0.33	-0.4
2,880,868	+		MPMX19_02736	0.35	-0.4
2,880,868	+		MPMX19_02736	0.35	+2.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+1.2
2,880,868	+		MPMX19_02736	0.35	+2.2
2,880,868	+		MPMX19_02736	0.35	+2.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	-0.4
2,880,868	+		MPMX19_02736	0.35	+1.2
2,880,868	+		MPMX19_02736	0.35	+1.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+1.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	-0.4
2,880,868	+		MPMX19_02736	0.35	+1.2
2,880,868	+		MPMX19_02736	0.35	+0.2
2,880,868	+		MPMX19_02736	0.35	+2.5
2,880,868	+		MPMX19_02736	0.35	-0.4
2,880,868	+		MPMX19_02736	0.35	+2.2
2,880,869	-		MPMX19_02736	0.35	+2.2
2,880,869	-		MPMX19_02736	0.35	+2.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+3.0
2,880,869	-		MPMX19_02736	0.35	+1.2
2,880,869	-		MPMX19_02736	0.35	+0.2
2,880,869	-		MPMX19_02736	0.35	+1.2
2,881,027	+		MPMX19_02736	0.48	+3.2
2,881,027	+		MPMX19_02736	0.48	-0.8
2,881,027	+		MPMX19_02736	0.48	+1.2
2,881,027	+		MPMX19_02736	0.48	-0.4
2,881,027	+		MPMX19_02736	0.48	+0.6
2,881,027	+		MPMX19_02736	0.48	-0.8
2,881,027	+		MPMX19_02736	0.48	+2.8
2,881,027	+		MPMX19_02736	0.48	+0.6
2,881,027	+		MPMX19_02736	0.48	+1.8
2,881,027	+		MPMX19_02736	0.48	-0.4
2,881,027	+		MPMX19_02736	0.48	+0.2
2,881,027	+		MPMX19_02736	0.48	+1.2
2,881,028	-		MPMX19_02736	0.48	+0.2
2,881,028	-		MPMX19_02736	0.48	-0.4
2,881,028	-		MPMX19_02736	0.48	-0.8
2,881,028	-		MPMX19_02736	0.48	-1.4
2,881,028	-		MPMX19_02736	0.48	+0.2
2,881,330	+		MPMX19_02736	0.73	-0.4
2,881,330	+		MPMX19_02736	0.73	-0.4
2,881,330	+		MPMX19_02736	0.73	+1.2
2,881,331	-		MPMX19_02736	0.73	-1.1
2,881,331	-		MPMX19_02736	0.73	+0.5
2,881,447	+		MPMX19_02736	0.82	+1.2
2,881,447	+		MPMX19_02736	0.82	+1.2
2,881,447	+		MPMX19_02736	0.82	+1.2
2,881,448	-		MPMX19_02736	0.82	-0.8
2,881,448	-		MPMX19_02736	0.82	+1.2
2,881,448	-		MPMX19_02736	0.82	+0.6
2,881,453	+		MPMX19_02736	0.83	+2.8
2,881,453	+		MPMX19_02736	0.83	+0.2
2,881,453	+		MPMX19_02736	0.83	+0.2
2,881,453	+		MPMX19_02736	0.83	+1.2
2,881,454	-		MPMX19_02736	0.83	+1.2
2,881,454	-		MPMX19_02736	0.83	-1.1
2,881,454	-		MPMX19_02736	0.83	+0.6
2,881,454	-		MPMX19_02736	0.83	-0.4
2,881,454	-		MPMX19_02736	0.83	+2.8
2,881,454	-		MPMX19_02736	0.83	-0.4
2,881,454	-		MPMX19_02736	0.83	+1.2
2,881,541	+				+0.2
2,881,983	+		MPMX19_02737	0.38	+2.2
2,881,983	+		MPMX19_02737	0.38	+1.2
2,881,983	+		MPMX19_02737	0.38	+1.2
2,881,984	-		MPMX19_02737	0.38	+1.2
2,882,004	+		MPMX19_02737	0.41	+1.2
2,882,005	-		MPMX19_02737	0.41	+2.8
2,882,005	-		MPMX19_02737	0.41	+2.8
2,882,005	-		MPMX19_02737	0.41	+0.2
2,882,202	+		MPMX19_02737	0.64	+1.2
2,882,202	+		MPMX19_02737	0.64	+0.2
2,882,202	+		MPMX19_02737	0.64	-1.1
2,882,203	-		MPMX19_02737	0.64	+1.2
2,882,205	+		MPMX19_02737	0.65	+1.2
2,882,205	+		MPMX19_02737	0.65	+0.2
2,882,205	+		MPMX19_02737	0.65	+0.2
2,882,205	+		MPMX19_02737	0.65	+2.8
2,882,205	+		MPMX19_02737	0.65	+1.2
2,882,205	+		MPMX19_02737	0.65	+0.6
2,882,205	+		MPMX19_02737	0.65	+1.2
2,882,205	+		MPMX19_02737	0.65	+1.6
2,882,205	+		MPMX19_02737	0.65	+2.8
2,882,205	+		MPMX19_02737	0.65	+0.2
2,882,206	-		MPMX19_02737	0.65	+1.8
2,882,206	-		MPMX19_02737	0.65	+1.2
2,882,206	-		MPMX19_02737	0.65	+0.6
2,882,206	-		MPMX19_02737	0.65	-1.1
2,882,206	-		MPMX19_02737	0.65	+0.2
2,882,206	-		MPMX19_02737	0.65	+1.2
2,882,206	-		MPMX19_02737	0.65	-0.8
2,882,206	-		MPMX19_02737	0.65	+2.2
2,882,206	-		MPMX19_02737	0.65	+2.2
2,882,206	-		MPMX19_02737	0.65	-0.8
2,882,518	+				+0.5
2,882,518	+				-1.4
2,882,518	+				-0.4
2,882,539	+				+0.6
2,882,539	+				+0.8
2,882,539	+				-0.4
2,882,539	+				-1.4
2,882,539	+				-0.8
2,882,539	+				+0.9
2,882,539	+				-0.1