Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02518 and MPMX19_02519 are separated by 315 nucleotides MPMX19_02519 and MPMX19_02520 are separated by 113 nucleotides
MPMX19_02518: MPMX19_02518 - tRNA (guanine-N(7)-)-methyltransferase, at 2,636,345 to 2,637,097
_02518
MPMX19_02519: MPMX19_02519 - Ribosome maturation factor RimP, at 2,637,413 to 2,637,862
_02519
MPMX19_02520: MPMX19_02520 - Transcription termination/antitermination protein NusA, at 2,637,976 to 2,639,547
_02520
Position (kb)
2637
2638 Strain fitness (log2 ratio)
-1
0
1
2 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.941 kb on + strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2636.942 kb on - strand, within MPMX19_02518 at 2637.026 kb on + strand at 2637.026 kb on + strand at 2637.026 kb on + strand at 2637.027 kb on - strand at 2637.027 kb on - strand at 2637.027 kb on - strand at 2637.027 kb on - strand at 2637.102 kb on + strand at 2637.102 kb on + strand at 2637.102 kb on + strand at 2637.103 kb on - strand at 2637.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 2,636,941 + MPMX19_02518 0.79 -1.4 2,636,941 + MPMX19_02518 0.79 -0.8 2,636,941 + MPMX19_02518 0.79 +1.2 2,636,941 + MPMX19_02518 0.79 +0.7 2,636,941 + MPMX19_02518 0.79 -0.4 2,636,941 + MPMX19_02518 0.79 +0.2 2,636,941 + MPMX19_02518 0.79 -0.8 2,636,941 + MPMX19_02518 0.79 -0.8 2,636,941 + MPMX19_02518 0.79 +1.2 2,636,941 + MPMX19_02518 0.79 +0.9 2,636,941 + MPMX19_02518 0.79 +1.2 2,636,941 + MPMX19_02518 0.79 -1.1 2,636,941 + MPMX19_02518 0.79 +0.5 2,636,941 + MPMX19_02518 0.79 +0.5 2,636,941 + MPMX19_02518 0.79 +0.5 2,636,941 + MPMX19_02518 0.79 +0.1 2,636,942 - MPMX19_02518 0.79 -0.8 2,636,942 - MPMX19_02518 0.79 +0.6 2,636,942 - MPMX19_02518 0.79 +0.5 2,636,942 - MPMX19_02518 0.79 +0.2 2,636,942 - MPMX19_02518 0.79 +0.9 2,636,942 - MPMX19_02518 0.79 -1.1 2,636,942 - MPMX19_02518 0.79 -0.6 2,636,942 - MPMX19_02518 0.79 -1.6 2,636,942 - MPMX19_02518 0.79 -0.6 2,636,942 - MPMX19_02518 0.79 -0.1 2,636,942 - MPMX19_02518 0.79 -0.2 2,636,942 - MPMX19_02518 0.79 -1.4 2,636,942 - MPMX19_02518 0.79 +2.2 2,636,942 - MPMX19_02518 0.79 -1.1 2,637,026 + +0.9 2,637,026 + -1.4 2,637,026 + +0.2 2,637,027 - -0.1 2,637,027 - +1.2 2,637,027 - +1.6 2,637,027 - -0.8 2,637,102 + +0.5 2,637,102 + -0.4 2,637,102 + +1.6 2,637,103 - -1.3 2,637,103 - +0.2
Or see this region's nucleotide sequence