Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01901

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,984,798	+				+0.9
1,984,798	+				-0.9
1,984,836	+				-2.7
1,984,836	+				+1.5
1,984,836	+				-0.1
1,984,836	+				-0.3
1,984,836	+				-1.1
1,984,837	-				+1.5
1,984,837	-				-0.3
1,984,837	-				+0.7
1,984,916	+				+0.1
1,984,916	+				-0.5
1,984,916	+				-1.3
1,984,916	+				-1.1
1,984,916	+				-0.5
1,984,916	+				-0.5
1,984,916	+				+0.5
1,984,916	+				+1.1
1,984,917	-				-0.5
1,984,917	-				+1.1
1,984,917	-				-1.3
1,984,953	+				-1.9
1,984,953	+				-1.3
1,984,953	+				+1.1
1,984,953	+				+0.5
1,984,953	+				-0.9
1,984,953	+				-0.9
1,984,953	+				-1.3
1,984,953	+				-0.7
1,984,953	+				-1.5
1,984,953	+				-0.1
1,984,953	+				+0.1
1,984,953	+				-0.1
1,984,953	+				-0.3
1,984,953	+				-0.9
1,984,953	+				-0.1
1,984,953	+				+0.3
1,984,953	+				-0.5
1,984,953	+				-0.5
1,984,954	-				+1.5
1,984,954	-				+0.6
1,984,954	-				-0.5
1,984,954	-				+1.1
1,984,954	-				-0.9
1,984,954	-				+0.2
1,984,954	-				-1.9
1,984,954	-				+0.1
1,984,954	-				+0.5
1,984,954	-				+0.5
1,984,954	-				+0.5
1,984,954	-				-2.0
1,984,954	-				+1.5
1,984,954	-				-0.1
1,984,954	-				+0.9
1,984,954	-				-0.5
1,984,954	-				+0.5
1,985,307	-		MPMX19_01900	0.52	+1.1
1,985,700	+				-0.5
1,985,700	+				+0.5
1,985,700	+				-0.9
1,985,700	+				+0.5
1,985,700	+				-1.1
1,985,700	+				-0.3
1,985,700	+				-0.1
1,985,701	-				-0.1
1,985,701	-				+1.1
1,985,701	-				-0.5
1,985,701	-				-1.1
1,985,701	-				+0.5
1,985,711	+				+0.2
1,985,711	+				-1.0
1,985,712	-				+0.4
1,985,712	-				-0.1
1,985,712	-				-0.8
1,985,712	-				-1.7
1,985,712	-				-0.1
1,985,712	-				+0.8
1,985,712	-				+1.0
1,986,880	+		MPMX19_01901	0.68	-0.0
1,986,880	+		MPMX19_01901	0.68	-0.1
1,986,880	+		MPMX19_01901	0.68	-0.1
1,986,880	+		MPMX19_01901	0.68	+0.5
1,986,881	-		MPMX19_01901	0.68	-0.2
1,986,881	-		MPMX19_01901	0.68	-0.1
1,986,881	-		MPMX19_01901	0.68	+0.7
1,986,881	-		MPMX19_01901	0.68	-0.2
1,986,881	-		MPMX19_01901	0.68	-1.3
1,986,907	+		MPMX19_01901	0.70	+0.3
1,986,907	+		MPMX19_01901	0.70	-0.1
1,986,907	+		MPMX19_01901	0.70	-0.3
1,986,907	+		MPMX19_01901	0.70	+0.2
1,986,907	+		MPMX19_01901	0.70	-0.1
1,986,907	+		MPMX19_01901	0.70	+0.1
1,986,907	+		MPMX19_01901	0.70	-0.6
1,986,907	+		MPMX19_01901	0.70	+0.5
1,986,907	+		MPMX19_01901	0.70	+0.9
1,986,908	-		MPMX19_01901	0.70	-1.5
1,986,908	-		MPMX19_01901	0.70	-1.5
1,986,908	-		MPMX19_01901	0.70	-0.5
1,986,908	-		MPMX19_01901	0.70	+2.1
1,986,908	-		MPMX19_01901	0.70	-1.1
1,986,908	-		MPMX19_01901	0.70	-0.8
1,986,908	-		MPMX19_01901	0.70	-1.9
1,986,916	+		MPMX19_01901	0.70	-1.2
1,986,916	+		MPMX19_01901	0.70	-0.8
1,986,916	+		MPMX19_01901	0.70	-1.3
1,986,916	+		MPMX19_01901	0.70	-0.1
1,986,916	+		MPMX19_01901	0.70	-0.9
1,986,917	-		MPMX19_01901	0.70	+0.5
1,986,917	-		MPMX19_01901	0.70	+1.9
1,986,917	-		MPMX19_01901	0.70	-0.9
1,986,917	-		MPMX19_01901	0.70	-1.1
1,986,917	-		MPMX19_01901	0.70	+0.5
1,986,917	-		MPMX19_01901	0.70	+0.6
1,986,917	-		MPMX19_01901	0.70	-1.0
1,986,917	-		MPMX19_01901	0.70	-0.2
1,986,917	-		MPMX19_01901	0.70	-0.3
1,986,917	-		MPMX19_01901	0.70	-1.3
1,986,917	-		MPMX19_01901	0.70	+0.5
1,986,917	-		MPMX19_01901	0.70	-1.5
1,986,917	-		MPMX19_01901	0.70	-1.3
1,986,946	+		MPMX19_01901	0.72	-1.5
1,986,947	-		MPMX19_01901	0.72	-1.6
1,986,947	-		MPMX19_01901	0.72	-0.7
1,986,947	-		MPMX19_01901	0.72	-0.9
1,986,947	-		MPMX19_01901	0.72	-0.5
1,987,030	+		MPMX19_01901	0.77	-1.7
1,987,030	+		MPMX19_01901	0.77	-1.4
1,987,030	+		MPMX19_01901	0.77	+0.2
1,987,030	+		MPMX19_01901	0.77	+0.5
1,987,030	+		MPMX19_01901	0.77	+1.9
1,987,030	+		MPMX19_01901	0.77	+1.5
1,987,030	+		MPMX19_01901	0.77	+0.4
1,987,030	+		MPMX19_01901	0.77	-1.0
1,987,030	+		MPMX19_01901	0.77	-0.1
1,987,030	+		MPMX19_01901	0.77	-1.2
1,987,030	+		MPMX19_01901	0.77	+0.8
1,987,030	+		MPMX19_01901	0.77	+1.7
1,987,030	+		MPMX19_01901	0.77	-1.3
1,987,030	+		MPMX19_01901	0.77	+1.5
1,987,030	+		MPMX19_01901	0.77	-1.5
1,987,030	+		MPMX19_01901	0.77	-2.0
1,987,030	+		MPMX19_01901	0.77	-0.1
1,987,030	+		MPMX19_01901	0.77	+2.3
1,987,030	+		MPMX19_01901	0.77	+0.8
1,987,030	+		MPMX19_01901	0.77	-0.5
1,987,030	+		MPMX19_01901	0.77	+1.1
1,987,030	+		MPMX19_01901	0.77	-0.1
1,987,030	+		MPMX19_01901	0.77	-1.0
1,987,030	+		MPMX19_01901	0.77	-1.3
1,987,030	+		MPMX19_01901	0.77	-0.1
1,987,030	+		MPMX19_01901	0.77	-1.1
1,987,030	+		MPMX19_01901	0.77	-0.2
1,987,030	+		MPMX19_01901	0.77	+0.5
1,987,030	+		MPMX19_01901	0.77	+0.1
1,987,030	+		MPMX19_01901	0.77	+0.9
1,987,030	+		MPMX19_01901	0.77	-1.4
1,987,030	+		MPMX19_01901	0.77	+0.9
1,987,030	+		MPMX19_01901	0.77	+0.7
1,987,030	+		MPMX19_01901	0.77	+0.9
1,987,030	+		MPMX19_01901	0.77	-1.7
1,987,031	-		MPMX19_01901	0.77	-0.9
1,987,031	-		MPMX19_01901	0.77	+0.5
1,987,031	-		MPMX19_01901	0.77	+1.5
1,987,031	-		MPMX19_01901	0.77	+0.2
1,987,031	-		MPMX19_01901	0.77	+0.9
1,987,031	-		MPMX19_01901	0.77	-1.5
1,987,031	-		MPMX19_01901	0.77	-0.3
1,987,031	-		MPMX19_01901	0.77	-0.2
1,987,031	-		MPMX19_01901	0.77	-0.5
1,987,031	-		MPMX19_01901	0.77	+0.6
1,987,031	-		MPMX19_01901	0.77	-1.3
1,987,031	-		MPMX19_01901	0.77	-1.1
1,987,031	-		MPMX19_01901	0.77	-1.3
1,987,031	-		MPMX19_01901	0.77	-0.4
1,987,031	-		MPMX19_01901	0.77	-2.5
1,987,031	-		MPMX19_01901	0.77	-0.5
1,987,031	-		MPMX19_01901	0.77	+0.8
1,987,031	-		MPMX19_01901	0.77	-0.9
1,987,031	-		MPMX19_01901	0.77	+0.2
1,987,031	-		MPMX19_01901	0.77	-2.2
1,987,031	-		MPMX19_01901	0.77	-1.1
1,987,031	-		MPMX19_01901	0.77	-0.7
1,987,210	+		MPMX19_01901	0.88	-0.3
1,987,210	+		MPMX19_01901	0.88	-0.6
1,987,210	+		MPMX19_01901	0.88	+1.7
1,987,210	+		MPMX19_01901	0.88	-0.1
1,987,210	+		MPMX19_01901	0.88	+0.5
1,987,210	+		MPMX19_01901	0.88	+0.5
1,987,210	+		MPMX19_01901	0.88	-1.2
1,987,210	+		MPMX19_01901	0.88	-0.5
1,987,210	+		MPMX19_01901	0.88	-1.4
1,987,210	+		MPMX19_01901	0.88	+0.7
1,987,210	+		MPMX19_01901	0.88	+0.5
1,987,210	+		MPMX19_01901	0.88	-0.9
1,987,210	+		MPMX19_01901	0.88	+0.3
1,987,210	+		MPMX19_01901	0.88	-0.9
1,987,210	+		MPMX19_01901	0.88	+0.2
1,987,210	+		MPMX19_01901	0.88	+0.1
1,987,211	-		MPMX19_01901	0.88	+0.9
1,987,211	-		MPMX19_01901	0.88	+0.5
1,987,211	-		MPMX19_01901	0.88	+2.1
1,987,211	-		MPMX19_01901	0.88	-1.1
1,987,211	-		MPMX19_01901	0.88	-1.7
1,987,211	-		MPMX19_01901	0.88	-0.9
1,987,211	-		MPMX19_01901	0.88	-1.3
1,987,211	-		MPMX19_01901	0.88	+0.1
1,987,211	-		MPMX19_01901	0.88	+0.9
1,987,211	-		MPMX19_01901	0.88	-0.2
1,987,211	-		MPMX19_01901	0.88	-1.2
1,987,211	-		MPMX19_01901	0.88	-0.3
1,987,211	-		MPMX19_01901	0.88	-0.5
1,987,211	-		MPMX19_01901	0.88	+0.2
1,987,724	-				+0.1
1,987,728	+				+1.2
1,987,728	+				+0.2
1,987,751	-				-0.8
1,987,802	-				+1.1
1,987,807	-				+0.5
1,987,899	+				-0.3
1,987,987	-				-0.9
1,987,997	+				-1.7
1,987,997	+				-0.3
1,987,998	-				-0.4
1,988,144	+		MPMX19_01902	0.11	-0.9
1,988,144	+		MPMX19_01902	0.11	-0.5
1,988,144	+		MPMX19_01902	0.11	+1.0
1,988,144	+		MPMX19_01902	0.11	+0.7
1,988,144	+		MPMX19_01902	0.11	+0.3
1,988,144	+		MPMX19_01902	0.11	+0.9
1,988,144	+		MPMX19_01902	0.11	-1.3
1,988,144	+		MPMX19_01902	0.11	+0.7
1,988,144	+		MPMX19_01902	0.11	+0.1
1,988,144	+		MPMX19_01902	0.11	-0.8
1,988,145	-		MPMX19_01902	0.11	-0.1
1,988,145	-		MPMX19_01902	0.11	+1.0
1,988,145	-		MPMX19_01902	0.11	-1.5
1,988,145	-		MPMX19_01902	0.11	+0.5
1,988,145	-		MPMX19_01902	0.11	+0.5
1,988,145	-		MPMX19_01902	0.11	+0.5
1,988,145	-		MPMX19_01902	0.11	-1.2
1,988,162	+		MPMX19_01902	0.12	-1.1
1,988,162	+		MPMX19_01902	0.12	-0.0
1,988,162	+		MPMX19_01902	0.12	+0.1
1,988,162	+		MPMX19_01902	0.12	-0.7
1,988,162	+		MPMX19_01902	0.12	-0.1
1,988,162	+		MPMX19_01902	0.12	+1.5
1,988,162	+		MPMX19_01902	0.12	-1.5
1,988,162	+		MPMX19_01902	0.12	-1.0
1,988,163	-		MPMX19_01902	0.13	+0.6
1,988,163	-		MPMX19_01902	0.13	+0.0
1,988,163	-		MPMX19_01902	0.13	-0.5
1,988,163	-		MPMX19_01902	0.13	-1.4
1,988,163	-		MPMX19_01902	0.13	+0.6