Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01299

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,355,788	+		MPMX19_01297	0.37	-0.7
1,355,888	-				-0.5
1,355,888	-				+0.9
1,355,896	+				-0.1
1,355,917	+				-0.9
1,355,917	+				-0.4
1,355,918	-				-0.9
1,355,918	-				-1.2
1,355,927	+				+0.5
1,355,927	+				-1.0
1,355,928	-				-0.1
1,355,928	-				-0.9
1,355,928	-				-0.3
1,355,928	-				+1.1
1,355,987	-				+0.3
1,355,994	+				+0.3
1,355,994	+				-1.9
1,355,994	+				-0.9
1,355,994	+				-0.5
1,355,994	+				+0.0
1,355,994	+				-1.1
1,355,994	+				+0.2
1,355,995	-				+0.5
1,355,995	-				+0.6
1,355,995	-				-0.0
1,356,087	+		MPMX19_01298	0.14	-0.1
1,356,087	+		MPMX19_01298	0.14	-0.8
1,356,087	+		MPMX19_01298	0.14	-0.3
1,356,087	+		MPMX19_01298	0.14	-1.0
1,356,088	-		MPMX19_01298	0.15	+0.5
1,356,088	-		MPMX19_01298	0.15	+0.5
1,356,088	-		MPMX19_01298	0.15	-0.9
1,356,088	-		MPMX19_01298	0.15	-1.4
1,356,088	-		MPMX19_01298	0.15	-1.0
1,356,088	-		MPMX19_01298	0.15	-0.5
1,356,235	+		MPMX19_01298	0.45	+0.6
1,356,236	-		MPMX19_01298	0.45	-0.9
1,356,236	-		MPMX19_01298	0.45	-0.3
1,356,236	-		MPMX19_01298	0.45	-1.1
1,356,246	+		MPMX19_01298	0.47	-1.1
1,356,246	+		MPMX19_01298	0.47	-0.5
1,356,246	+		MPMX19_01298	0.47	-1.4
1,356,246	+		MPMX19_01298	0.47	-0.4
1,356,246	+		MPMX19_01298	0.47	-0.5
1,356,246	+		MPMX19_01298	0.47	-0.5
1,356,246	+		MPMX19_01298	0.47	-0.5
1,356,247	-		MPMX19_01298	0.48	-1.8
1,356,247	-		MPMX19_01298	0.48	-1.2
1,356,247	-		MPMX19_01298	0.48	-0.1
1,356,247	-		MPMX19_01298	0.48	+0.5
1,356,247	-		MPMX19_01298	0.48	-1.4
1,356,247	-		MPMX19_01298	0.48	-1.0
1,356,247	-		MPMX19_01298	0.48	-0.5
1,356,276	+		MPMX19_01298	0.54	+0.3
1,356,276	+		MPMX19_01298	0.54	-0.5
1,356,276	+		MPMX19_01298	0.54	-0.0
1,356,276	+		MPMX19_01298	0.54	-2.1
1,356,276	+		MPMX19_01298	0.54	-1.1
1,356,276	+		MPMX19_01298	0.54	-1.2
1,356,276	+		MPMX19_01298	0.54	-1.1
1,356,276	+		MPMX19_01298	0.54	-1.5
1,356,276	+		MPMX19_01298	0.54	+0.0
1,356,277	-		MPMX19_01298	0.54	-0.1
1,356,277	-		MPMX19_01298	0.54	-1.4
1,356,277	-		MPMX19_01298	0.54	-1.1
1,356,277	-		MPMX19_01298	0.54	-1.1
1,356,277	-		MPMX19_01298	0.54	+0.1
1,356,277	-		MPMX19_01298	0.54	-1.1
1,356,277	-		MPMX19_01298	0.54	-1.1
1,356,277	-		MPMX19_01298	0.54	+0.2
1,356,277	-		MPMX19_01298	0.54	-0.7
1,356,297	+		MPMX19_01298	0.58	+0.5
1,356,297	+		MPMX19_01298	0.58	-0.9
1,356,297	+		MPMX19_01298	0.58	-0.8
1,356,297	+		MPMX19_01298	0.58	+0.5
1,356,297	+		MPMX19_01298	0.58	+1.5
1,356,297	+		MPMX19_01298	0.58	-1.8
1,356,297	+		MPMX19_01298	0.58	-3.0
1,356,297	+		MPMX19_01298	0.58	-0.9
1,356,297	+		MPMX19_01298	0.58	-0.4
1,356,297	+		MPMX19_01298	0.58	-1.4
1,356,297	+		MPMX19_01298	0.58	-1.1
1,356,297	+		MPMX19_01298	0.58	-2.1
1,356,297	+		MPMX19_01298	0.58	-2.1
1,356,297	+		MPMX19_01298	0.58	-1.1
1,356,298	-		MPMX19_01298	0.58	-0.7
1,356,298	-		MPMX19_01298	0.58	+0.2
1,356,298	-		MPMX19_01298	0.58	-1.9
1,356,298	-		MPMX19_01298	0.58	+1.5
1,356,298	-		MPMX19_01298	0.58	-1.1
1,356,298	-		MPMX19_01298	0.58	-0.5
1,356,298	-		MPMX19_01298	0.58	+0.5
1,356,298	-		MPMX19_01298	0.58	-1.1
1,356,298	-		MPMX19_01298	0.58	-0.1
1,356,298	-		MPMX19_01298	0.58	-2.2
1,356,298	-		MPMX19_01298	0.58	-0.5
1,356,298	-		MPMX19_01298	0.58	+0.5
1,356,300	+		MPMX19_01298	0.59	-0.1
1,356,344	+		MPMX19_01298	0.68	+1.5
1,356,344	+		MPMX19_01298	0.68	-0.5
1,356,344	+		MPMX19_01298	0.68	-1.9
1,356,344	+		MPMX19_01298	0.68	-1.5
1,356,344	+		MPMX19_01298	0.68	-0.3
1,356,344	+		MPMX19_01298	0.68	-1.7
1,356,344	+		MPMX19_01298	0.68	-1.1
1,356,344	+		MPMX19_01298	0.68	-0.1
1,356,344	+		MPMX19_01298	0.68	-0.5
1,356,344	+		MPMX19_01298	0.68	-0.5
1,356,344	+		MPMX19_01298	0.68	-0.8
1,356,344	+		MPMX19_01298	0.68	+1.5
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	-0.2
1,356,344	+		MPMX19_01298	0.68	-0.6
1,356,344	+		MPMX19_01298	0.68	-1.7
1,356,344	+		MPMX19_01298	0.68	-0.8
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	+0.1
1,356,344	+		MPMX19_01298	0.68	+0.5
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	-1.4
1,356,344	+		MPMX19_01298	0.68	+0.9
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	+0.5
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	-0.5
1,356,344	+		MPMX19_01298	0.68	+0.3
1,356,344	+		MPMX19_01298	0.68	-0.9
1,356,344	+		MPMX19_01298	0.68	-0.5
1,356,345	-		MPMX19_01298	0.68	+0.5
1,356,345	-		MPMX19_01298	0.68	-0.4
1,356,345	-		MPMX19_01298	0.68	-0.1
1,356,345	-		MPMX19_01298	0.68	-2.0
1,356,345	-		MPMX19_01298	0.68	-1.0
1,356,345	-		MPMX19_01298	0.68	+0.9
1,356,345	-		MPMX19_01298	0.68	-1.1
1,356,345	-		MPMX19_01298	0.68	+0.5
1,356,345	-		MPMX19_01298	0.68	-0.5
1,356,345	-		MPMX19_01298	0.68	-0.1
1,356,345	-		MPMX19_01298	0.68	-1.3
1,356,345	-		MPMX19_01298	0.68	-0.9
1,356,345	-		MPMX19_01298	0.68	+0.3
1,356,345	-		MPMX19_01298	0.68	-1.1
1,356,345	-		MPMX19_01298	0.68	+1.5
1,356,345	-		MPMX19_01298	0.68	-1.2
1,356,345	-		MPMX19_01298	0.68	-1.1
1,356,345	-		MPMX19_01298	0.68	-1.0
1,356,345	-		MPMX19_01298	0.68	-1.2
1,356,345	-		MPMX19_01298	0.68	+0.9
1,356,345	-		MPMX19_01298	0.68	+0.5
1,356,345	-		MPMX19_01298	0.68	-1.0
1,356,468	+				+0.5
1,356,468	+				-1.7
1,356,468	+				-0.0
1,356,468	+				-1.1
1,356,468	+				-1.7
1,356,468	+				-1.1
1,356,468	+				-1.9
1,356,468	+				-2.1
1,356,468	+				-0.1
1,356,468	+				-0.4
1,356,468	+				-1.9
1,356,469	-				-0.1
1,356,469	-				-0.5
1,356,469	-				-1.4
1,356,469	-				-1.5
1,356,469	-				+0.5
1,356,635	+				+0.0
1,356,663	-				-0.4
1,356,724	+				+0.7
1,356,724	+				-1.5
1,356,724	+				-0.5
1,356,724	+				-1.0
1,356,724	+				+0.1
1,356,724	+				-0.0
1,356,724	+				-2.1
1,356,724	+				-2.1
1,356,724	+				+0.8
1,356,724	+				-0.5
1,356,724	+				-1.5
1,356,724	+				-0.6
1,356,724	+				+0.6
1,356,724	+				-0.9
1,356,724	+				-0.4
1,356,724	+				+0.1
1,356,724	+				-0.8
1,356,724	+				-1.5
1,356,724	+				-0.1
1,356,724	+				-0.9
1,356,725	-				-0.1
1,356,725	-				+3.0
1,356,725	-				-1.1
1,356,725	-				-1.4
1,356,725	-				-1.0
1,356,725	-				-0.2
1,356,725	-				+1.0
1,356,725	-				+1.2
1,356,725	-				+1.5
1,356,725	-				-1.1
1,356,725	-				-0.7
1,356,725	-				+0.7
1,356,725	-				-1.6
1,356,725	-				+0.2
1,356,725	-				-0.4
1,356,725	-				-2.1
1,356,725	-				-1.9
1,356,725	-				-0.1
1,356,725	-				+0.1
1,357,491	-				-0.8
1,357,524	+				-1.1
1,358,288	-				-0.0
1,358,288	-				-0.7
1,358,291	-				-0.1
1,358,291	-				-0.1
1,358,291	-				-1.0
1,358,306	-				+0.5
1,358,306	-				-0.9
1,358,306	-				-1.9
1,358,306	-				+0.7
1,358,306	-				-0.5
1,358,306	-				-0.7
1,358,306	-				+0.1
1,358,306	-				+0.2