Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01192

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,238,939	+		MPMX19_01191	0.57	-1.2
1,238,939	+		MPMX19_01191	0.57	-0.9
1,238,975	+		MPMX19_01191	0.60	-0.9
1,238,975	+		MPMX19_01191	0.60	-0.3
1,239,009	+		MPMX19_01191	0.62	+0.4
1,239,009	+		MPMX19_01191	0.62	-1.4
1,239,092	+		MPMX19_01191	0.67	+0.4
1,239,092	+		MPMX19_01191	0.67	-0.9
1,239,092	+		MPMX19_01191	0.67	-0.4
1,239,093	-		MPMX19_01191	0.67	-1.0
1,239,164	+		MPMX19_01191	0.72	-1.0
1,239,338	+		MPMX19_01191	0.83	-0.1
1,239,338	+		MPMX19_01191	0.83	-1.2
1,239,338	+		MPMX19_01191	0.83	-1.4
1,239,338	+		MPMX19_01191	0.83	-0.9
1,239,338	+		MPMX19_01191	0.83	-0.5
1,239,338	+		MPMX19_01191	0.83	+0.0
1,239,338	+		MPMX19_01191	0.83	+0.3
1,239,338	+		MPMX19_01191	0.83	-1.5
1,239,338	+		MPMX19_01191	0.83	+0.4
1,239,338	+		MPMX19_01191	0.83	+1.7
1,239,338	+		MPMX19_01191	0.83	-1.4
1,239,338	+		MPMX19_01191	0.83	+0.3
1,239,338	+		MPMX19_01191	0.83	-0.9
1,239,338	+		MPMX19_01191	0.83	-1.9
1,239,338	+		MPMX19_01191	0.83	-0.2
1,239,338	+		MPMX19_01191	0.83	-0.4
1,239,338	+		MPMX19_01191	0.83	-0.2
1,239,338	+		MPMX19_01191	0.83	-1.2
1,239,338	+		MPMX19_01191	0.83	+0.2
1,239,338	+		MPMX19_01191	0.83	+0.7
1,239,338	+		MPMX19_01191	0.83	-0.4
1,239,338	+		MPMX19_01191	0.83	-0.9
1,239,338	+		MPMX19_01191	0.83	+0.1
1,239,338	+		MPMX19_01191	0.83	+0.1
1,239,338	+		MPMX19_01191	0.83	-1.7
1,239,338	+		MPMX19_01191	0.83	+1.0
1,239,338	+		MPMX19_01191	0.83	-0.5
1,239,339	-		MPMX19_01191	0.83	-0.4
1,239,339	-		MPMX19_01191	0.83	-2.0
1,239,339	-		MPMX19_01191	0.83	-0.0
1,239,339	-		MPMX19_01191	0.83	-0.2
1,239,339	-		MPMX19_01191	0.83	+0.4
1,239,339	-		MPMX19_01191	0.83	-1.4
1,239,339	-		MPMX19_01191	0.83	+0.2
1,239,339	-		MPMX19_01191	0.83	-0.4
1,239,339	-		MPMX19_01191	0.83	-1.0
1,239,339	-		MPMX19_01191	0.83	-0.9
1,239,339	-		MPMX19_01191	0.83	+1.0
1,239,339	-		MPMX19_01191	0.83	-1.2
1,239,339	-		MPMX19_01191	0.83	-0.9
1,239,339	-		MPMX19_01191	0.83	-1.4
1,239,339	-		MPMX19_01191	0.83	+1.4
1,239,339	-		MPMX19_01191	0.83	-1.1
1,239,339	-		MPMX19_01191	0.83	+0.8
1,239,339	-		MPMX19_01191	0.83	-0.9
1,239,339	-		MPMX19_01191	0.83	-0.8
1,239,339	-		MPMX19_01191	0.83	+0.6
1,239,339	-		MPMX19_01191	0.83	-0.4
1,239,339	-		MPMX19_01191	0.83	-1.1
1,239,339	-		MPMX19_01191	0.83	+0.4
1,239,339	-		MPMX19_01191	0.83	+0.4
1,239,339	-		MPMX19_01191	0.83	-0.2
1,239,339	-		MPMX19_01191	0.83	-1.5
1,239,339	-		MPMX19_01191	0.83	-0.6
1,239,339	-		MPMX19_01191	0.83	-0.9
1,239,339	-		MPMX19_01191	0.83	-0.6
1,239,458	+				+0.2
1,239,458	+				-0.3
1,239,458	+				-0.2
1,239,458	+				+0.0
1,239,458	+				-0.2
1,239,458	+				-0.9
1,239,458	+				-0.1
1,239,459	-				-0.3
1,239,459	-				+0.4
1,239,459	-				-1.4
1,239,459	-				-1.5
1,239,459	-				-0.7
1,239,459	-				-0.2
1,239,485	+				-0.3
1,239,485	+				-1.4
1,239,485	+				-0.4
1,239,485	+				-1.2
1,239,485	+				-0.3
1,239,485	+				+0.1
1,239,485	+				-1.2
1,239,486	-				-0.4
1,239,486	-				+0.0
1,239,486	-				-0.8
1,239,486	-				-0.7
1,239,651	+				-1.2
1,239,651	+				-0.9
1,239,651	+				-0.4
1,239,651	+				-2.3
1,239,651	+				-2.0
1,239,651	+				+0.4
1,239,651	+				+0.4
1,239,651	+				+0.4
1,239,651	+				+0.5
1,239,651	+				-0.9
1,239,651	+				+0.1
1,239,651	+				-1.7
1,239,652	-				-1.2
1,239,652	-				-0.6
1,239,652	-				-0.6
1,239,652	-				-1.4
1,239,652	-				-1.7
1,239,652	-				+0.2
1,239,652	-				-0.6
1,239,652	-				-1.2
1,239,652	-				+0.8
1,239,652	-				+2.4
1,239,652	-				-0.2
1,239,652	-				+1.1
1,239,655	+				+1.4
1,239,655	+				-0.2
1,239,655	+				+1.0
1,239,655	+				-0.5
1,239,655	+				+0.1
1,239,655	+				+0.1
1,239,655	+				+0.4
1,239,655	+				-0.7
1,239,655	+				-0.6
1,239,655	+				-2.4
1,239,656	-				-1.4
1,239,656	-				-1.9
1,239,656	-				-0.3
1,239,656	-				-0.2
1,239,656	-				-1.4
1,239,656	-				-3.0
1,239,752	+				-0.9
1,241,119	+		MPMX19_01192	0.82	-1.4
1,241,440	-				+0.5
1,241,440	-				-1.6
1,241,440	-				+0.4
1,241,440	-				-0.9
1,241,442	-				+0.2
1,241,442	-				-0.6
1,241,442	-				-1.2
1,241,442	-				+1.0
1,241,442	-				-0.7
1,241,442	-				-1.4
1,241,442	-				-1.6
1,241,442	-				-1.3
1,241,442	-				+1.0
1,241,442	-				-1.1
1,241,442	-				-1.9
1,241,442	-				-1.2
1,241,442	-				-2.0
1,241,442	-				-1.5
1,241,442	-				-1.7
1,241,501	-				-0.2
1,241,501	-				-0.3
1,241,501	-				-0.4
1,241,501	-				-1.6
1,241,501	-				-1.6
1,241,501	-				+0.4
1,241,501	-				-0.2
1,241,501	-				+1.2
1,241,501	-				-1.7
1,241,501	-				-0.9
1,241,501	-				-1.2
1,241,501	-				-0.6
1,241,504	+				+1.0
1,241,505	-				-1.4
1,241,505	-				-0.6
1,241,505	-				-1.4
1,241,505	-				-0.3
1,241,505	-				-1.2
1,241,505	-				-2.7
1,241,505	-				-0.7
1,241,505	-				-0.6
1,241,505	-				-1.2
1,241,505	-				-0.2
1,241,505	-				-0.6
1,241,505	-				-0.6
1,241,505	-				+1.0
1,241,505	-				-0.8
1,241,505	-				+0.6
1,241,505	-				-0.9
1,241,505	-				-0.2
1,241,505	-				-0.9
1,241,505	-				+1.7
1,241,505	-				-2.0
1,241,505	-				+1.0
1,241,505	-				-1.4
1,241,505	-				-0.6
1,241,505	-				-0.2
1,241,505	-				+0.3
1,241,505	-				-1.2
1,241,505	-				-1.4
1,241,505	-				-0.2
1,241,505	-				+1.4
1,241,572	+				-1.2
1,241,572	+				-0.4
1,241,573	-				+1.4
1,241,573	-				-0.2
1,241,573	-				+0.7
1,241,573	-				-1.2
1,241,573	-				-0.6
1,241,573	-				-0.2
1,241,573	-				+2.7
1,241,573	-				-0.4
1,241,573	-				-0.0
1,241,573	-				+0.0