Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01129

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF_with10percent_fullN
				remove
1,161,856	+	MPMX19_01128	0.74	-0.7
1,161,856	+	MPMX19_01128	0.74	+0.1
1,161,856	+	MPMX19_01128	0.74	-0.7
1,161,856	+	MPMX19_01128	0.74	+0.1
1,161,856	+	MPMX19_01128	0.74	-0.7
1,161,856	+	MPMX19_01128	0.74	-0.6
1,161,856	+	MPMX19_01128	0.74	+0.4
1,161,856	+	MPMX19_01128	0.74	-3.0
1,161,856	+	MPMX19_01128	0.74	-0.9
1,161,856	+	MPMX19_01128	0.74	-0.9
1,161,856	+	MPMX19_01128	0.74	+1.8
1,161,856	+	MPMX19_01128	0.74	-1.3
1,161,856	+	MPMX19_01128	0.74	+0.0
1,161,857	-	MPMX19_01128	0.74	+0.2
1,161,857	-	MPMX19_01128	0.74	-0.6
1,161,857	-	MPMX19_01128	0.74	-0.2
1,161,857	-	MPMX19_01128	0.74	-1.2
1,161,857	-	MPMX19_01128	0.74	-1.2
1,161,857	-	MPMX19_01128	0.74	+0.7
1,161,857	-	MPMX19_01128	0.74	-0.2
1,161,857	-	MPMX19_01128	0.74	-0.2
1,161,857	-	MPMX19_01128	0.74	-0.6
1,161,967	+			-0.9
1,161,967	+			-1.3
1,161,967	+			-1.2
1,161,967	+			+0.9
1,161,967	+			+1.4
1,161,967	+			-1.6
1,161,967	+			+0.4
1,161,967	+			-0.6
1,161,967	+			-1.6
1,161,967	+			-1.2
1,161,967	+			-0.2
1,161,968	-			-1.9
1,161,968	-			-0.6
1,161,968	-			-0.1
1,161,968	-			-0.6
1,161,968	-			-1.8
1,161,968	-			-1.7
1,161,968	-			-0.4
1,161,968	-			-0.0
1,161,997	+			-0.8
1,161,997	+			+0.1
1,161,997	+			-1.7
1,161,997	+			+0.4
1,161,998	-			+2.0
1,161,998	-			-1.4
1,162,016	+			-0.3
1,162,016	+			-1.2
1,162,017	-			-0.7
1,162,137	+			-0.6
1,162,137	+			+0.1
1,162,138	-			-1.7
1,162,138	-			-0.2
1,162,365	+	MPMX19_01129	0.16	+0.3
1,162,365	+	MPMX19_01129	0.16	+0.2
1,162,365	+	MPMX19_01129	0.16	-2.2
1,162,365	+	MPMX19_01129	0.16	+0.9
1,162,365	+	MPMX19_01129	0.16	+2.4
1,162,365	+	MPMX19_01129	0.16	+0.5
1,162,365	+	MPMX19_01129	0.16	-1.7
1,162,365	+	MPMX19_01129	0.16	+1.7
1,162,365	+	MPMX19_01129	0.16	+0.1
1,162,365	+	MPMX19_01129	0.16	-0.9
1,162,365	+	MPMX19_01129	0.16	-1.9
1,162,365	+	MPMX19_01129	0.16	+0.7
1,162,365	+	MPMX19_01129	0.16	-0.3
1,162,365	+	MPMX19_01129	0.16	-0.3
1,162,366	-	MPMX19_01129	0.16	-0.1
1,162,366	-	MPMX19_01129	0.16	-0.6
1,162,366	-	MPMX19_01129	0.16	+0.0
1,162,366	-	MPMX19_01129	0.16	+0.4
1,162,366	-	MPMX19_01129	0.16	+1.3
1,162,366	-	MPMX19_01129	0.16	-1.4
1,162,366	-	MPMX19_01129	0.16	-0.6
1,162,366	-	MPMX19_01129	0.16	-2.0
1,162,366	-	MPMX19_01129	0.16	-1.7
1,162,366	-	MPMX19_01129	0.16	+0.8
1,162,366	-	MPMX19_01129	0.16	-0.8
1,162,366	-	MPMX19_01129	0.16	+1.0
1,162,366	-	MPMX19_01129	0.16	+1.0
1,162,366	-	MPMX19_01129	0.16	-0.7
1,162,366	-	MPMX19_01129	0.16	-1.2
1,162,366	-	MPMX19_01129	0.16	+0.4
1,162,366	-	MPMX19_01129	0.16	-0.0
1,162,539	+	MPMX19_01129	0.27	+1.0
1,162,539	+	MPMX19_01129	0.27	-1.2
1,162,539	+	MPMX19_01129	0.27	-1.6
1,162,539	+	MPMX19_01129	0.27	+1.4
1,162,539	+	MPMX19_01129	0.27	+0.7
1,162,539	+	MPMX19_01129	0.27	+2.0
1,162,539	+	MPMX19_01129	0.27	-0.7
1,162,540	-	MPMX19_01129	0.27	-0.4
1,162,540	-	MPMX19_01129	0.27	-0.9
1,162,540	-	MPMX19_01129	0.27	-0.2
1,162,540	-	MPMX19_01129	0.27	-1.2
1,162,540	-	MPMX19_01129	0.27	-0.2
1,162,540	-	MPMX19_01129	0.27	+1.0
1,162,540	-	MPMX19_01129	0.27	+2.0
1,162,540	-	MPMX19_01129	0.27	-0.6
1,162,540	-	MPMX19_01129	0.27	+0.7
1,162,540	-	MPMX19_01129	0.27	-0.6
1,162,540	-	MPMX19_01129	0.27	+2.2
1,162,540	-	MPMX19_01129	0.27	+0.6
1,162,540	-	MPMX19_01129	0.27	-0.6
1,162,542	+	MPMX19_01129	0.27	-0.8
1,162,542	+	MPMX19_01129	0.27	-0.2
1,162,542	+	MPMX19_01129	0.27	-0.2
1,162,542	+	MPMX19_01129	0.27	+0.6
1,162,542	+	MPMX19_01129	0.27	+1.3
1,162,542	+	MPMX19_01129	0.27	+0.2
1,162,542	+	MPMX19_01129	0.27	-0.2
1,162,543	-	MPMX19_01129	0.27	-0.4
1,162,543	-	MPMX19_01129	0.27	-1.3
1,162,543	-	MPMX19_01129	0.27	-0.0
1,162,543	-	MPMX19_01129	0.27	+0.2
1,162,543	-	MPMX19_01129	0.27	-1.3
1,162,543	-	MPMX19_01129	0.27	-1.4
1,162,543	-	MPMX19_01129	0.27	-2.4
1,162,605	+	MPMX19_01129	0.30	+2.0
1,162,605	+	MPMX19_01129	0.30	-2.5
1,162,605	+	MPMX19_01129	0.30	-0.5
1,162,605	+	MPMX19_01129	0.30	+0.3
1,162,605	+	MPMX19_01129	0.30	-1.1
1,162,605	+	MPMX19_01129	0.30	+0.5
1,162,605	+	MPMX19_01129	0.30	-1.0
1,162,605	+	MPMX19_01129	0.30	+3.4
1,162,605	+	MPMX19_01129	0.30	-1.2
1,162,605	+	MPMX19_01129	0.30	-0.6
1,162,606	-	MPMX19_01129	0.31	-1.1
1,162,606	-	MPMX19_01129	0.31	-0.1
1,162,606	-	MPMX19_01129	0.31	+0.2
1,162,606	-	MPMX19_01129	0.31	-2.5
1,162,606	-	MPMX19_01129	0.31	-0.8
1,162,606	-	MPMX19_01129	0.31	-1.7
1,162,606	-	MPMX19_01129	0.31	+1.1
1,162,606	-	MPMX19_01129	0.31	+0.4
1,162,606	-	MPMX19_01129	0.31	+0.0
1,162,606	-	MPMX19_01129	0.31	-0.6
1,162,606	-	MPMX19_01129	0.31	+0.6
1,162,606	-	MPMX19_01129	0.31	-0.0
1,162,606	-	MPMX19_01129	0.31	-0.5
1,162,656	+	MPMX19_01129	0.33	+0.1
1,162,656	+	MPMX19_01129	0.33	-0.2
1,162,656	+	MPMX19_01129	0.33	-0.2
1,162,656	+	MPMX19_01129	0.33	-0.2
1,162,657	-	MPMX19_01129	0.34	+0.4
1,162,761	+	MPMX19_01129	0.40	+1.2
1,162,761	+	MPMX19_01129	0.40	-0.6
1,162,761	+	MPMX19_01129	0.40	-1.4
1,162,761	+	MPMX19_01129	0.40	+1.8
1,162,761	+	MPMX19_01129	0.40	+0.1
1,162,761	+	MPMX19_01129	0.40	-0.2
1,162,761	+	MPMX19_01129	0.40	+0.3
1,162,762	-	MPMX19_01129	0.40	+0.8
1,162,762	-	MPMX19_01129	0.40	-2.5
1,162,762	-	MPMX19_01129	0.40	+0.2
1,162,762	-	MPMX19_01129	0.40	+1.0
1,162,762	-	MPMX19_01129	0.40	-3.1
1,162,762	-	MPMX19_01129	0.40	+0.4
1,162,775	-	MPMX19_01129	0.40	-0.6
1,162,893	+	MPMX19_01129	0.47	+1.1
1,162,893	+	MPMX19_01129	0.47	+0.4
1,162,893	+	MPMX19_01129	0.47	-1.2
1,162,893	+	MPMX19_01129	0.47	+0.8
1,162,893	+	MPMX19_01129	0.47	+0.4
1,162,894	-	MPMX19_01129	0.47	-0.6
1,162,894	-	MPMX19_01129	0.47	-1.0
1,162,894	-	MPMX19_01129	0.47	-1.2
1,162,894	-	MPMX19_01129	0.47	-1.4
1,162,894	-	MPMX19_01129	0.47	-0.5
1,162,943	+	MPMX19_01129	0.50	-2.6
1,162,943	+	MPMX19_01129	0.50	-0.4
1,162,943	+	MPMX19_01129	0.50	+2.0
1,162,943	+	MPMX19_01129	0.50	+0.2
1,162,943	+	MPMX19_01129	0.50	-0.2
1,162,943	+	MPMX19_01129	0.50	-1.5
1,162,943	+	MPMX19_01129	0.50	-0.1
1,162,943	+	MPMX19_01129	0.50	-1.5
1,162,943	+	MPMX19_01129	0.50	+0.2
1,162,943	+	MPMX19_01129	0.50	-1.9
1,162,943	+	MPMX19_01129	0.50	+0.1
1,162,944	-	MPMX19_01129	0.50	-1.2
1,162,944	-	MPMX19_01129	0.50	-0.6
1,162,944	-	MPMX19_01129	0.50	-0.6
1,162,944	-	MPMX19_01129	0.50	+0.9
1,162,944	-	MPMX19_01129	0.50	+1.2
1,162,944	-	MPMX19_01129	0.50	+0.0
1,162,944	-	MPMX19_01129	0.50	-0.6
1,162,944	-	MPMX19_01129	0.50	+0.9
1,162,944	-	MPMX19_01129	0.50	+0.3
1,163,011	+	MPMX19_01129	0.54	-1.6
1,163,011	+	MPMX19_01129	0.54	-2.6
1,163,012	+	MPMX19_01129	0.54	-1.4
1,163,518	+	MPMX19_01129	0.84	-1.1
1,163,518	+	MPMX19_01129	0.84	-0.4
1,163,518	+	MPMX19_01129	0.84	-1.6
1,163,518	+	MPMX19_01129	0.84	+0.0
1,163,519	-	MPMX19_01129	0.84	+1.0
1,163,519	-	MPMX19_01129	0.84	+0.2
1,163,628	+			+1.2
1,163,628	+			+1.3
1,163,628	+			-0.2
1,163,628	+			+1.2
1,163,628	+			-1.8
1,163,628	+			+0.4
1,163,628	+			-0.2
1,163,628	+			-1.6
1,163,628	+			-0.7
1,163,628	+			-1.1
1,163,628	+			-1.4
1,163,628	+			+0.1
1,163,628	+			-1.9
1,163,628	+			+0.6
1,163,628	+			+0.4
1,163,629	-			-1.2
1,163,629	-			-1.2
1,163,629	-			-0.1
1,163,629	-			+0.4
1,163,629	-			-2.6
1,163,629	-			+1.4
1,163,629	-			+0.4
1,163,629	-			-1.2
1,163,629	-			-0.6
1,163,719	+			+1.0
1,163,719	+			-1.2
1,163,720	-			-1.4
1,163,720	-			-0.9
1,163,720	-			-1.7
1,163,720	-			-0.2
1,163,805	+			+0.4
1,163,805	+			-0.2
1,163,806	-			+1.4
1,163,808	+			+1.4
1,163,809	-			-0.6
1,163,809	-			+0.7
1,163,809	-			-1.2
1,163,857	+			-1.6
1,163,975	+			-0.2
1,163,976	-			+0.2
1,163,976	-			+0.4
1,163,976	-			-0.2
1,164,040	+			-1.3
1,164,041	-			-0.9
1,164,041	-			+0.2

Or see this region's nucleotide sequence