Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04824

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
228,853	+		MPMX19_04823	0.34	+1.7
228,853	+		MPMX19_04823	0.34	-1.7
228,853	+		MPMX19_04823	0.34	-2.0
228,853	+		MPMX19_04823	0.34	-1.2
228,854	-		MPMX19_04823	0.34	-0.7
228,854	-		MPMX19_04823	0.34	+1.1
228,854	-		MPMX19_04823	0.34	-1.7
229,027	+		MPMX19_04823	0.47	-1.2
229,027	+		MPMX19_04823	0.47	-0.3
229,027	+		MPMX19_04823	0.47	-2.5
229,027	+		MPMX19_04823	0.47	+0.7
229,027	+		MPMX19_04823	0.47	+1.7
229,028	-		MPMX19_04823	0.47	-1.2
229,028	-		MPMX19_04823	0.47	-0.7
229,028	-		MPMX19_04823	0.47	-0.9
229,036	+		MPMX19_04823	0.47	-0.3
229,036	+		MPMX19_04823	0.47	-0.3
229,036	+		MPMX19_04823	0.47	-0.9
229,036	+		MPMX19_04823	0.47	-0.5
229,037	-		MPMX19_04823	0.47	-0.5
229,037	-		MPMX19_04823	0.47	-1.1
229,037	-		MPMX19_04823	0.47	-0.3
229,037	-		MPMX19_04823	0.47	-1.5
229,037	-		MPMX19_04823	0.47	-1.3
229,507	+		MPMX19_04823	0.83	-1.5
229,507	+		MPMX19_04823	0.83	-1.3
229,507	+		MPMX19_04823	0.83	-0.3
229,507	+		MPMX19_04823	0.83	-1.7
229,507	+		MPMX19_04823	0.83	-1.2
229,507	+		MPMX19_04823	0.83	+1.1
229,507	+		MPMX19_04823	0.83	+0.1
229,507	+		MPMX19_04823	0.83	-0.7
229,507	+		MPMX19_04823	0.83	+1.2
229,507	+		MPMX19_04823	0.83	-0.9
229,507	+		MPMX19_04823	0.83	-1.3
229,507	+		MPMX19_04823	0.83	-3.0
229,507	+		MPMX19_04823	0.83	-0.7
229,507	+		MPMX19_04823	0.83	-1.2
229,507	+		MPMX19_04823	0.83	+0.4
229,507	+		MPMX19_04823	0.83	+0.7
229,507	+		MPMX19_04823	0.83	-0.9
229,507	+		MPMX19_04823	0.83	+1.3
229,508	-		MPMX19_04823	0.83	+1.1
229,508	-		MPMX19_04823	0.83	-2.2
229,508	-		MPMX19_04823	0.83	-0.7
229,508	-		MPMX19_04823	0.83	-2.2
229,508	-		MPMX19_04823	0.83	+0.2
229,508	-		MPMX19_04823	0.83	-0.7
229,508	-		MPMX19_04823	0.83	+1.1
229,508	-		MPMX19_04823	0.83	-0.7
229,508	-		MPMX19_04823	0.83	-0.5
229,508	-		MPMX19_04823	0.83	-0.7
229,508	-		MPMX19_04823	0.83	+0.5
229,508	-		MPMX19_04823	0.83	-1.8
229,508	-		MPMX19_04823	0.83	-1.8
229,508	-		MPMX19_04823	0.83	+0.7
229,508	-		MPMX19_04823	0.83	-0.3
229,582	+		MPMX19_04823	0.89	-1.0
229,582	+		MPMX19_04823	0.89	-1.7
229,582	+		MPMX19_04823	0.89	-0.5
229,582	+		MPMX19_04823	0.89	+1.1
229,582	+		MPMX19_04823	0.89	-0.9
229,582	+		MPMX19_04823	0.89	-1.5
229,582	+		MPMX19_04823	0.89	-1.8
229,582	+		MPMX19_04823	0.89	+0.1
229,582	+		MPMX19_04823	0.89	+0.7
229,582	+		MPMX19_04823	0.89	+0.9
229,582	+		MPMX19_04823	0.89	+1.7
229,582	+		MPMX19_04823	0.89	-1.2
229,583	-		MPMX19_04823	0.89	+0.7
229,583	-		MPMX19_04823	0.89	+0.7
229,583	-		MPMX19_04823	0.89	-0.5
229,583	-		MPMX19_04823	0.89	+0.1
229,583	-		MPMX19_04823	0.89	-2.0
229,583	-		MPMX19_04823	0.89	-2.0
229,583	-		MPMX19_04823	0.89	-0.9
229,583	-		MPMX19_04823	0.89	-1.5
229,583	-		MPMX19_04823	0.89	-1.2
229,583	-		MPMX19_04823	0.89	-1.4
229,583	-		MPMX19_04823	0.89	+0.9
229,583	-		MPMX19_04823	0.89	-0.9
229,583	-		MPMX19_04823	0.89	-1.3
229,583	-		MPMX19_04823	0.89	-0.9
229,583	-		MPMX19_04823	0.89	-0.3
229,583	-		MPMX19_04823	0.89	-1.2
229,584	+		MPMX19_04823	0.89	-0.9
229,585	-		MPMX19_04823	0.89	-1.2
229,585	-		MPMX19_04823	0.89	-0.7
229,657	+				-0.3
229,658	-				-2.3
229,663	+				-0.3
229,663	+				-0.3
229,664	-				-0.3
229,664	-				+1.3
229,664	-				-0.9
229,664	-				-1.7
229,664	-				-1.9
229,681	+				-1.1
229,681	+				-1.8
229,681	+				-1.3
229,681	+				-2.3
229,681	+				-0.7
229,681	+				-0.9
229,681	+				-0.9
229,682	-				-1.2
229,682	-				-0.5
229,682	-				-1.4
229,682	-				-3.2
229,682	-				-0.3
229,729	+				-0.2
229,729	+				+0.7
229,730	-				-0.7
229,730	-				-1.3
229,825	-				-1.5
229,914	+				-0.5
229,914	+				-0.5
229,914	+				-0.3
229,914	+				+1.2
229,914	+				-1.5
229,915	-				+0.1
229,915	-				-1.3
229,915	-				+0.1
229,915	-				-1.3
229,915	-				+0.1
230,127	+		MPMX19_04824	0.16	+0.7
230,127	+		MPMX19_04824	0.16	-2.3
230,127	+		MPMX19_04824	0.16	-1.7
230,127	+		MPMX19_04824	0.16	+0.3
230,128	-		MPMX19_04824	0.16	-0.9
230,128	-		MPMX19_04824	0.16	+0.8
230,128	-		MPMX19_04824	0.16	+0.1
230,128	-		MPMX19_04824	0.16	-0.3
230,286	+		MPMX19_04824	0.24	-0.2
230,286	+		MPMX19_04824	0.24	-1.2
230,286	+		MPMX19_04824	0.24	+0.1
230,286	+		MPMX19_04824	0.24	-0.7
230,287	-		MPMX19_04824	0.24	-0.9
230,287	-		MPMX19_04824	0.24	-1.5
230,287	-		MPMX19_04824	0.24	-0.2
230,475	+		MPMX19_04824	0.33	-0.9
230,475	+		MPMX19_04824	0.33	+1.1
230,475	+		MPMX19_04824	0.33	-1.2
230,476	-		MPMX19_04824	0.33	-1.5
230,476	-		MPMX19_04824	0.33	-0.5
230,769	+		MPMX19_04824	0.46	-2.3
230,769	+		MPMX19_04824	0.46	-1.7
230,769	+		MPMX19_04824	0.46	-0.9
230,770	-		MPMX19_04824	0.46	-1.2
230,770	-		MPMX19_04824	0.46	+0.1
230,770	-		MPMX19_04824	0.46	-0.9
230,770	-		MPMX19_04824	0.46	-1.3
230,770	-		MPMX19_04824	0.46	-2.2
230,770	-		MPMX19_04824	0.46	+0.1
230,770	-		MPMX19_04824	0.46	-0.2
230,770	-		MPMX19_04824	0.46	+0.2
230,979	+		MPMX19_04824	0.56	-0.5
230,979	+		MPMX19_04824	0.56	-0.8
230,979	+		MPMX19_04824	0.56	+0.1
230,980	-		MPMX19_04824	0.56	-1.8
230,980	-		MPMX19_04824	0.56	-0.7
230,980	-		MPMX19_04824	0.56	-1.7
230,980	-		MPMX19_04824	0.56	-0.7
231,364	-		MPMX19_04824	0.74	-2.6
231,462	+		MPMX19_04824	0.78	-1.9
231,462	+		MPMX19_04824	0.78	-1.4
231,462	+		MPMX19_04824	0.78	-0.2
231,462	+		MPMX19_04824	0.78	-0.3
231,463	-		MPMX19_04824	0.78	+0.3
231,463	-		MPMX19_04824	0.78	-1.5
231,504	+		MPMX19_04824	0.80	-0.6
231,504	+		MPMX19_04824	0.80	-0.7
231,505	-		MPMX19_04824	0.80	-0.6
231,505	-		MPMX19_04824	0.80	-0.7
231,505	-		MPMX19_04824	0.80	+0.3
231,505	-		MPMX19_04824	0.80	+0.8
231,505	-		MPMX19_04824	0.80	-0.9
231,516	+		MPMX19_04824	0.81	-0.3
231,516	+		MPMX19_04824	0.81	-0.2
231,516	+		MPMX19_04824	0.81	-0.5
231,516	+		MPMX19_04824	0.81	-0.3
231,516	+		MPMX19_04824	0.81	+0.7
231,516	+		MPMX19_04824	0.81	-2.6
231,517	-		MPMX19_04824	0.81	+0.5
231,517	-		MPMX19_04824	0.81	+2.0
231,517	-		MPMX19_04824	0.81	+0.7
231,517	-		MPMX19_04824	0.81	+0.1
231,517	-		MPMX19_04824	0.81	-0.3
231,517	-		MPMX19_04824	0.81	-1.5
231,517	-		MPMX19_04824	0.81	-0.7
231,517	-		MPMX19_04824	0.81	+0.1
231,517	-		MPMX19_04824	0.81	-1.0
231,517	-		MPMX19_04824	0.81	+0.5
231,517	-		MPMX19_04824	0.81	-0.7
231,555	+		MPMX19_04824	0.83	-1.3
231,555	+		MPMX19_04824	0.83	+0.1
231,556	-		MPMX19_04824	0.83	-1.0
231,600	+		MPMX19_04824	0.85	-0.2
231,600	+		MPMX19_04824	0.85	-0.9
231,600	+		MPMX19_04824	0.85	-1.2
231,600	+		MPMX19_04824	0.85	-0.7
231,601	-		MPMX19_04824	0.85	-0.7
231,601	-		MPMX19_04824	0.85	-1.3
231,601	-		MPMX19_04824	0.85	-0.9
231,663	+		MPMX19_04824	0.88	-0.7
231,663	+		MPMX19_04824	0.88	-1.8
231,663	+		MPMX19_04824	0.88	-2.2
231,663	+		MPMX19_04824	0.88	-0.3
231,664	-		MPMX19_04824	0.88	+0.7
231,664	-		MPMX19_04824	0.88	-0.7
231,664	-		MPMX19_04824	0.88	+0.1
231,664	-		MPMX19_04824	0.88	-0.3
231,690	+		MPMX19_04824	0.89	+0.1
231,690	+		MPMX19_04824	0.89	-0.7
231,690	+		MPMX19_04824	0.89	-2.0
231,690	+		MPMX19_04824	0.89	-0.9
231,773	+				-0.3
231,773	+				-1.4
231,773	+				+1.2
231,774	-				+0.3
231,774	-				-1.7
231,882	+				-1.1
231,882	+				-0.9
231,882	+				+0.7
231,882	+				-0.7
231,883	-				-0.9
231,883	-				+0.1
232,047	+				-0.2
232,047	+				-0.3
232,048	-				-1.9
232,048	-				-0.1
232,060	+				+0.1
232,061	-				+0.7
232,061	-				-1.5