Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04639

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
18,031	+		MPMX19_04638	0.64	-0.7
18,031	+		MPMX19_04638	0.64	-1.7
18,031	+		MPMX19_04638	0.64	+0.1
18,032	-		MPMX19_04638	0.64	+0.1
18,032	-		MPMX19_04638	0.64	-1.3
18,044	-		MPMX19_04638	0.65	+0.1
18,431	+				-0.3
18,431	+				-1.5
18,432	-				-0.8
18,432	-				-0.7
18,432	-				-0.7
18,560	+				+0.1
18,561	-				+0.1
18,583	-				-0.3
18,780	-				-0.6
18,793	+				-2.1
18,957	+				-0.5
19,011	+				-1.5
19,012	-				-1.5
19,012	-				-0.5
19,012	-				-1.5
19,012	-				-0.3
19,113	+		MPMX19_04639	0.11	-1.5
19,113	+		MPMX19_04639	0.11	+0.1
19,113	+		MPMX19_04639	0.11	-0.2
19,113	+		MPMX19_04639	0.11	-1.3
19,113	+		MPMX19_04639	0.11	-1.1
19,113	+		MPMX19_04639	0.11	+0.7
19,113	+		MPMX19_04639	0.11	-1.5
19,113	+		MPMX19_04639	0.11	-0.5
19,113	+		MPMX19_04639	0.11	-0.3
19,113	+		MPMX19_04639	0.11	+0.7
19,113	+		MPMX19_04639	0.11	-2.4
19,114	-		MPMX19_04639	0.11	-1.1
19,114	-		MPMX19_04639	0.11	-1.2
19,114	-		MPMX19_04639	0.11	-2.1
19,114	-		MPMX19_04639	0.11	+0.1
19,114	-		MPMX19_04639	0.11	-0.0
19,114	-		MPMX19_04639	0.11	-0.8
19,114	-		MPMX19_04639	0.11	-0.9
19,114	-		MPMX19_04639	0.11	-1.5
19,114	-		MPMX19_04639	0.11	-0.1
19,114	-		MPMX19_04639	0.11	+0.1
19,114	-		MPMX19_04639	0.11	-0.3
19,114	-		MPMX19_04639	0.11	+0.3
19,167	+		MPMX19_04639	0.13	+0.1
19,395	+		MPMX19_04639	0.21	+2.1
19,395	+		MPMX19_04639	0.21	-0.9
19,395	+		MPMX19_04639	0.21	-0.7
19,395	+		MPMX19_04639	0.21	-0.7
19,396	-		MPMX19_04639	0.21	-0.8
19,396	-		MPMX19_04639	0.21	-1.1
19,396	-		MPMX19_04639	0.21	-0.8
19,396	-		MPMX19_04639	0.21	-0.3
19,449	+		MPMX19_04639	0.23	+0.1
19,449	+		MPMX19_04639	0.23	+0.7
19,449	+		MPMX19_04639	0.23	-0.5
19,449	+		MPMX19_04639	0.23	-0.3
19,449	+		MPMX19_04639	0.23	-0.7
19,449	+		MPMX19_04639	0.23	-0.1
19,491	+		MPMX19_04639	0.25	-1.8
19,491	+		MPMX19_04639	0.25	-2.2
19,491	+		MPMX19_04639	0.25	-1.3
19,491	+		MPMX19_04639	0.25	-0.2
19,491	+		MPMX19_04639	0.25	-0.7
19,491	+		MPMX19_04639	0.25	+0.3
19,492	-		MPMX19_04639	0.25	+1.1
19,492	-		MPMX19_04639	0.25	-0.3
19,492	-		MPMX19_04639	0.25	+0.1
19,492	-		MPMX19_04639	0.25	-1.5
19,492	-		MPMX19_04639	0.25	-1.3
19,492	-		MPMX19_04639	0.25	+0.3
19,492	-		MPMX19_04639	0.25	-1.1
19,492	-		MPMX19_04639	0.25	+0.1
19,551	+		MPMX19_04639	0.27	-0.9
19,551	+		MPMX19_04639	0.27	-1.0
19,551	+		MPMX19_04639	0.27	-1.7
19,551	+		MPMX19_04639	0.27	-0.9
19,551	+		MPMX19_04639	0.27	-0.9
19,551	+		MPMX19_04639	0.27	-0.7
19,551	+		MPMX19_04639	0.27	+0.2
19,551	+		MPMX19_04639	0.27	-0.7
19,551	+		MPMX19_04639	0.27	-0.8
19,552	-		MPMX19_04639	0.27	-0.1
19,552	-		MPMX19_04639	0.27	-1.2
19,552	-		MPMX19_04639	0.27	+0.3
19,552	-		MPMX19_04639	0.27	-1.9
19,552	-		MPMX19_04639	0.27	+0.3
19,552	-		MPMX19_04639	0.27	-0.3
19,552	-		MPMX19_04639	0.27	-1.5
19,552	-		MPMX19_04639	0.27	-1.1
19,552	-		MPMX19_04639	0.27	-0.5
19,861	-		MPMX19_04639	0.38	+0.1
19,861	-		MPMX19_04639	0.38	-0.6
20,046	+		MPMX19_04639	0.45	-0.9
20,046	+		MPMX19_04639	0.45	+0.4
20,047	-		MPMX19_04639	0.45	-0.9
20,047	-		MPMX19_04639	0.45	-1.5
20,100	+		MPMX19_04639	0.47	+1.7
20,100	+		MPMX19_04639	0.47	+0.4
20,101	-		MPMX19_04639	0.47	-0.3
20,101	-		MPMX19_04639	0.47	-0.3
20,101	-		MPMX19_04639	0.47	+0.9
20,112	+		MPMX19_04639	0.47	-0.3
20,112	+		MPMX19_04639	0.47	+0.3
20,112	+		MPMX19_04639	0.47	-0.7
20,112	+		MPMX19_04639	0.47	-2.2
20,112	+		MPMX19_04639	0.47	-0.0
20,112	+		MPMX19_04639	0.47	-1.7
20,112	+		MPMX19_04639	0.47	-1.5
20,112	+		MPMX19_04639	0.47	-0.3
20,113	-		MPMX19_04639	0.47	+0.1
20,113	-		MPMX19_04639	0.47	-1.8
20,113	-		MPMX19_04639	0.47	+1.7
20,113	-		MPMX19_04639	0.47	-0.9
20,113	-		MPMX19_04639	0.47	-1.5
20,113	-		MPMX19_04639	0.47	+0.3
20,181	+		MPMX19_04639	0.50	+0.3
20,181	+		MPMX19_04639	0.50	-1.1
20,182	-		MPMX19_04639	0.50	-0.3
20,182	-		MPMX19_04639	0.50	-0.2
20,182	-		MPMX19_04639	0.50	-1.3
20,413	-		MPMX19_04639	0.58	-0.3
20,433	+		MPMX19_04639	0.59	+1.7
20,433	+		MPMX19_04639	0.59	-1.7
20,433	+		MPMX19_04639	0.59	-0.1
20,433	+		MPMX19_04639	0.59	-0.7
20,434	-		MPMX19_04639	0.59	-0.3
20,434	-		MPMX19_04639	0.59	-2.3
20,434	-		MPMX19_04639	0.59	-0.7
20,434	-		MPMX19_04639	0.59	-2.0
20,434	-		MPMX19_04639	0.59	+0.1
20,434	-		MPMX19_04639	0.59	-0.7
20,434	-		MPMX19_04639	0.59	-0.7
20,646	+		MPMX19_04639	0.66	-0.9
20,646	+		MPMX19_04639	0.66	+0.4
20,646	+		MPMX19_04639	0.66	+0.3
20,647	-		MPMX19_04639	0.66	-0.8
20,730	+		MPMX19_04639	0.69	-0.7
20,730	+		MPMX19_04639	0.69	-1.1
20,731	-		MPMX19_04639	0.69	+0.3
20,754	+		MPMX19_04639	0.70	-0.3
20,754	+		MPMX19_04639	0.70	-1.1
20,754	+		MPMX19_04639	0.70	+0.9
20,754	+		MPMX19_04639	0.70	-0.7
20,754	+		MPMX19_04639	0.70	-0.9
20,754	+		MPMX19_04639	0.70	-1.7
20,754	+		MPMX19_04639	0.70	-0.2
20,755	-		MPMX19_04639	0.70	-0.1
20,755	-		MPMX19_04639	0.70	+0.1
20,755	-		MPMX19_04639	0.70	-0.7
20,892	+		MPMX19_04639	0.75	-1.5
20,892	+		MPMX19_04639	0.75	+0.1
20,892	+		MPMX19_04639	0.75	-1.4
20,892	+		MPMX19_04639	0.75	-0.5
20,893	-		MPMX19_04639	0.75	-0.1
20,893	-		MPMX19_04639	0.75	+2.2
20,976	+		MPMX19_04639	0.78	-0.1
20,976	+		MPMX19_04639	0.78	+1.7
20,976	+		MPMX19_04639	0.78	-1.3
20,976	+		MPMX19_04639	0.78	+0.3
20,976	+		MPMX19_04639	0.78	-0.5
20,977	-		MPMX19_04639	0.78	-0.5
20,977	-		MPMX19_04639	0.78	-0.3
20,977	-		MPMX19_04639	0.78	-0.3
20,979	+		MPMX19_04639	0.78	-1.5
20,979	+		MPMX19_04639	0.78	-1.3
20,979	+		MPMX19_04639	0.78	-0.8
20,979	+		MPMX19_04639	0.78	+1.1
20,979	+		MPMX19_04639	0.78	-1.1
20,979	+		MPMX19_04639	0.78	+0.1
20,980	-		MPMX19_04639	0.78	+1.7
20,980	-		MPMX19_04639	0.78	+0.7
20,980	-		MPMX19_04639	0.78	+0.3
20,980	-		MPMX19_04639	0.78	-0.3
20,980	-		MPMX19_04639	0.78	+0.3
21,045	+		MPMX19_04639	0.81	+0.5
21,045	+		MPMX19_04639	0.81	-0.5
21,045	+		MPMX19_04639	0.81	-0.7
21,046	-		MPMX19_04639	0.81	-1.3
21,046	-		MPMX19_04639	0.81	+1.1
21,046	-		MPMX19_04639	0.81	-0.7
21,046	-		MPMX19_04639	0.81	-0.8
21,046	-		MPMX19_04639	0.81	-1.5
21,105	+		MPMX19_04639	0.83	-0.1
21,105	+		MPMX19_04639	0.83	-1.1
21,105	+		MPMX19_04639	0.83	+0.1
21,105	+		MPMX19_04639	0.83	+0.2
21,106	-		MPMX19_04639	0.83	+0.1
21,106	-		MPMX19_04639	0.83	-0.7
21,106	-		MPMX19_04639	0.83	-1.5
21,108	+		MPMX19_04639	0.83	+0.2
21,108	+		MPMX19_04639	0.83	-0.9
21,108	+		MPMX19_04639	0.83	+0.3
21,108	+		MPMX19_04639	0.83	-0.6
21,108	+		MPMX19_04639	0.83	+0.3
21,108	+		MPMX19_04639	0.83	+0.1
21,108	+		MPMX19_04639	0.83	+1.7
21,108	+		MPMX19_04639	0.83	-0.7
21,108	+		MPMX19_04639	0.83	-1.5
21,109	-		MPMX19_04639	0.83	-1.5
21,109	-		MPMX19_04639	0.83	-0.5
21,109	-		MPMX19_04639	0.83	-2.0
21,109	-		MPMX19_04639	0.83	-0.1
21,109	-		MPMX19_04639	0.83	+0.6
21,109	-		MPMX19_04639	0.83	-0.8
21,109	-		MPMX19_04639	0.83	+0.1
21,109	-		MPMX19_04639	0.83	+0.1
21,109	-		MPMX19_04639	0.83	-0.7
21,109	-		MPMX19_04639	0.83	-2.2
21,109	-		MPMX19_04639	0.83	-0.9
21,109	-		MPMX19_04639	0.83	-0.3
21,183	+		MPMX19_04639	0.86	-1.9
21,183	+		MPMX19_04639	0.86	+0.7
21,183	+		MPMX19_04639	0.86	-0.9
21,183	+		MPMX19_04639	0.86	-2.1
21,183	+		MPMX19_04639	0.86	-2.2
21,183	+		MPMX19_04639	0.86	-0.3
21,183	+		MPMX19_04639	0.86	+1.1
21,183	+		MPMX19_04639	0.86	-0.7
21,183	+		MPMX19_04639	0.86	+0.3
21,183	+		MPMX19_04639	0.86	-0.5
21,183	+		MPMX19_04639	0.86	-0.3
21,183	+		MPMX19_04639	0.86	-0.3
21,183	+		MPMX19_04639	0.86	-0.9
21,183	+		MPMX19_04639	0.86	-0.2
21,183	+		MPMX19_04639	0.86	-1.1
21,184	-		MPMX19_04639	0.86	-0.0
21,184	-		MPMX19_04639	0.86	-0.7
21,184	-		MPMX19_04639	0.86	-0.3
21,184	-		MPMX19_04639	0.86	-0.9
21,184	-		MPMX19_04639	0.86	-1.0
21,184	-		MPMX19_04639	0.86	+0.7
21,184	-		MPMX19_04639	0.86	+0.9
21,184	-		MPMX19_04639	0.86	-0.1
21,184	-		MPMX19_04639	0.86	-1.5
21,184	-		MPMX19_04639	0.86	+1.2
21,184	-		MPMX19_04639	0.86	+0.3
21,184	-		MPMX19_04639	0.86	-1.9
21,184	-		MPMX19_04639	0.86	+1.0
21,184	-		MPMX19_04639	0.86	+0.9
21,184	-		MPMX19_04639	0.86	-1.2
21,270	+		MPMX19_04639	0.89	-1.6
21,270	+		MPMX19_04639	0.89	-0.3
21,270	+		MPMX19_04639	0.89	-2.5
21,270	+		MPMX19_04639	0.89	-0.3
21,270	+		MPMX19_04639	0.89	+0.1
21,270	+		MPMX19_04639	0.89	-1.4
21,270	+		MPMX19_04639	0.89	-0.5
21,270	+		MPMX19_04639	0.89	-1.9
21,270	+		MPMX19_04639	0.89	+0.3
21,270	+		MPMX19_04639	0.89	-0.3
21,270	+		MPMX19_04639	0.89	-0.3
21,270	+		MPMX19_04639	0.89	-0.9
21,270	+		MPMX19_04639	0.89	-0.3
21,270	+		MPMX19_04639	0.89	-1.1
21,271	-		MPMX19_04639	0.89	-0.9
21,271	-		MPMX19_04639	0.89	-1.1
21,271	-		MPMX19_04639	0.89	+0.1
21,271	-		MPMX19_04639	0.89	-1.2
21,271	-		MPMX19_04639	0.89	+0.2
21,271	-		MPMX19_04639	0.89	-0.9
21,271	-		MPMX19_04639	0.89	+0.7
21,271	-		MPMX19_04639	0.89	-0.7
21,271	-		MPMX19_04639	0.89	-0.9
21,271	-		MPMX19_04639	0.89	-0.1
21,271	-		MPMX19_04639	0.89	-0.7
21,324	+				-0.5
21,325	-				-2.7
21,333	+				-1.1
21,333	+				-0.7
21,333	+				-0.8
21,333	+				+1.7
21,333	+				-0.7
21,334	-				-0.7
21,334	-				-1.3
21,334	-				+0.3
21,447	+				+1.0
21,447	+				-0.3
21,447	+				-1.1
21,447	+				-1.8
21,447	+				+0.7
21,448	-				-3.0
21,448	-				-0.8
21,448	-				-1.3
21,448	-				+0.7
21,448	-				-0.2
21,549	+				+1.1
21,549	+				+1.7
21,549	+				-0.6
21,549	+				-0.8
21,549	+				-1.9
21,550	-				-1.5
21,550	-				-1.0
21,550	-				-1.3
21,576	+				-1.0
21,576	+				+0.1
21,577	-				+0.7
21,577	-				-0.5
21,686	-				-1.8
21,693	+				-0.0
21,696	-				-0.8
21,696	-				-0.9
21,753	-				-2.0
21,783	-				+0.1
21,827	+				-0.6
21,902	-				-0.7
22,014	+				-0.9
22,014	+				-1.1
22,014	+				-0.3
22,014	+				+1.1
22,014	+				-1.4
22,014	+				-1.3
22,015	-				-1.1
22,015	-				+0.5
22,015	-				-0.8
22,015	-				-0.9
22,015	-				-2.3
22,015	-				+0.3
22,015	-				-0.2
22,015	-				-1.6
22,015	-				-0.1
22,015	-				+0.1
22,024	+				-0.2
22,025	-				-0.9
22,056	+				+0.1
22,056	+				+0.4
22,056	+				-0.7
22,056	+				+0.7
22,056	+				-1.1
22,056	+				-0.1
22,056	+				+0.1
22,056	+				+0.9
22,056	+				-0.9
22,057	-				+0.5
22,057	-				-0.5
22,057	-				+0.3
22,057	-				-1.1
22,279	+				-0.3
22,279	+				+0.1
22,279	+				-0.7
22,280	-				-0.6
22,411	+		MPMX19_04640	0.14	+0.9
22,411	+		MPMX19_04640	0.14	-0.9
22,411	+		MPMX19_04640	0.14	-0.7
22,412	-		MPMX19_04640	0.14	+0.2
22,412	-		MPMX19_04640	0.14	+0.3
22,470	+		MPMX19_04640	0.21	-0.2
22,470	+		MPMX19_04640	0.21	-0.9
22,470	+		MPMX19_04640	0.21	+0.1
22,471	-		MPMX19_04640	0.21	-0.1