Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02870

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
115,160	-		MPMX19_02869	0.46	-0.4
115,578	+		MPMX19_02869	0.73	-1.0
115,578	+		MPMX19_02869	0.73	+0.6
115,578	+		MPMX19_02869	0.73	+0.3
115,578	+		MPMX19_02869	0.73	-0.7
115,579	-		MPMX19_02869	0.73	-0.3
115,579	-		MPMX19_02869	0.73	-2.7
115,579	-		MPMX19_02869	0.73	-0.8
115,623	+		MPMX19_02869	0.76	+0.4
115,623	+		MPMX19_02869	0.76	-1.8
115,623	+		MPMX19_02869	0.76	+0.2
115,624	-		MPMX19_02869	0.76	-3.5
115,624	-		MPMX19_02869	0.76	-0.4
115,624	-		MPMX19_02869	0.76	-0.4
115,624	-		MPMX19_02869	0.76	-0.7
115,624	-		MPMX19_02869	0.76	-1.3
115,624	-		MPMX19_02869	0.76	-2.3
115,680	+		MPMX19_02869	0.80	-0.4
115,732	-		MPMX19_02869	0.83	+0.1
115,732	-		MPMX19_02869	0.83	-0.1
115,750	+		MPMX19_02869	0.85	-1.9
115,751	-		MPMX19_02869	0.85	-0.5
115,931	-				-1.0
116,020	-				-1.3
116,020	-				-1.6
116,051	+				-2.6
116,051	+				+0.1
116,105	-				-1.1
116,119	-				-0.2
116,119	-				-0.1
116,357	+				-0.4
116,357	+				-1.0
116,358	-				-1.4
116,358	-				-0.7
116,358	-				+0.3
116,432	+				-0.7
116,433	-				-0.7
116,687	+		MPMX19_02870	0.14	-1.7
116,687	+		MPMX19_02870	0.14	-1.7
116,687	+		MPMX19_02870	0.14	-1.2
116,687	+		MPMX19_02870	0.14	-0.7
116,688	-		MPMX19_02870	0.14	-1.4
116,688	-		MPMX19_02870	0.14	-1.4
116,688	-		MPMX19_02870	0.14	-0.9
116,688	-		MPMX19_02870	0.14	+0.6
116,688	-		MPMX19_02870	0.14	+1.6
116,786	+		MPMX19_02870	0.16	-0.8
116,786	+		MPMX19_02870	0.16	+0.0
116,787	-		MPMX19_02870	0.16	+0.0
116,927	+		MPMX19_02870	0.19	+0.6
116,927	+		MPMX19_02870	0.19	-0.7
116,927	+		MPMX19_02870	0.19	-2.2
116,927	+		MPMX19_02870	0.19	+0.4
116,928	-		MPMX19_02870	0.19	-0.7
116,928	-		MPMX19_02870	0.19	+0.0
116,928	-		MPMX19_02870	0.19	+1.6
117,218	+		MPMX19_02870	0.25	-0.7
117,218	+		MPMX19_02870	0.25	+0.2
117,218	+		MPMX19_02870	0.25	+0.0
117,278	+		MPMX19_02870	0.26	-1.3
117,278	+		MPMX19_02870	0.26	-0.7
117,359	+		MPMX19_02870	0.27	+2.2
117,869	+		MPMX19_02870	0.37	+1.6
117,869	+		MPMX19_02870	0.37	+0.4
117,869	+		MPMX19_02870	0.37	+0.0
117,869	+		MPMX19_02870	0.37	+0.0
117,870	-		MPMX19_02870	0.37	-0.7
117,870	-		MPMX19_02870	0.37	-1.4
117,870	-		MPMX19_02870	0.37	-0.7
117,870	-		MPMX19_02870	0.37	-0.4
117,870	-		MPMX19_02870	0.37	+0.2
117,870	-		MPMX19_02870	0.37	-0.8
117,870	-		MPMX19_02870	0.37	+0.0
117,965	+		MPMX19_02870	0.39	-1.4
117,965	+		MPMX19_02870	0.39	-0.9
117,965	+		MPMX19_02870	0.39	+0.3
117,965	+		MPMX19_02870	0.39	+1.3
117,965	+		MPMX19_02870	0.39	+0.0
117,966	-		MPMX19_02870	0.39	-1.4
117,966	-		MPMX19_02870	0.39	+0.0
117,966	-		MPMX19_02870	0.39	+1.6
117,966	-		MPMX19_02870	0.39	+0.6
117,966	-		MPMX19_02870	0.39	+0.0
117,966	-		MPMX19_02870	0.39	-1.2
117,966	-		MPMX19_02870	0.39	-0.7
117,966	-		MPMX19_02870	0.39	+1.3
117,966	-		MPMX19_02870	0.39	-1.9
117,966	-		MPMX19_02870	0.39	-0.7
118,059	-		MPMX19_02870	0.41	-1.7
118,059	-		MPMX19_02870	0.41	-1.0
118,059	-		MPMX19_02870	0.41	-0.7
118,121	+		MPMX19_02870	0.42	-1.6
118,121	+		MPMX19_02870	0.42	+0.3
118,154	+		MPMX19_02870	0.43	-0.7
118,154	+		MPMX19_02870	0.43	+0.6
118,154	+		MPMX19_02870	0.43	-0.4
118,154	+		MPMX19_02870	0.43	-0.6
118,155	-		MPMX19_02870	0.43	-0.7
118,155	-		MPMX19_02870	0.43	+0.6
118,166	+		MPMX19_02870	0.43	+0.2
118,166	+		MPMX19_02870	0.43	+0.0
118,166	+		MPMX19_02870	0.43	+1.0
118,190	+		MPMX19_02870	0.44	-1.0
118,191	-		MPMX19_02870	0.44	-0.7
118,275	+		MPMX19_02870	0.45	-0.4
118,275	+		MPMX19_02870	0.45	-1.0
118,275	+		MPMX19_02870	0.45	+0.0
118,276	-		MPMX19_02870	0.45	-1.9
118,276	-		MPMX19_02870	0.45	+0.0
118,393	-		MPMX19_02870	0.48	-0.4
118,412	+		MPMX19_02870	0.48	-1.3
118,412	+		MPMX19_02870	0.48	-3.3
118,412	+		MPMX19_02870	0.48	+1.4
118,412	+		MPMX19_02870	0.48	-1.0
118,412	+		MPMX19_02870	0.48	+0.0
118,412	+		MPMX19_02870	0.48	+0.7
118,412	+		MPMX19_02870	0.48	+0.0
118,413	-		MPMX19_02870	0.48	+1.6
118,413	-		MPMX19_02870	0.48	-0.7
118,413	-		MPMX19_02870	0.48	-1.2
118,413	-		MPMX19_02870	0.48	-0.7
118,413	-		MPMX19_02870	0.48	-0.1
118,475	+		MPMX19_02870	0.49	+0.3
118,475	+		MPMX19_02870	0.49	-1.2
118,475	+		MPMX19_02870	0.49	-1.0
118,523	+		MPMX19_02870	0.50	+0.9
118,523	+		MPMX19_02870	0.50	-0.7
118,524	-		MPMX19_02870	0.50	-1.7
118,524	-		MPMX19_02870	0.50	-0.7
118,524	-		MPMX19_02870	0.50	+0.6
118,728	-		MPMX19_02870	0.54	-0.4
118,728	-		MPMX19_02870	0.54	-1.7
118,844	+		MPMX19_02870	0.57	-0.2
118,844	+		MPMX19_02870	0.57	-1.0
118,845	-		MPMX19_02870	0.57	-1.2
118,845	-		MPMX19_02870	0.57	-2.2
118,845	-		MPMX19_02870	0.57	+0.4
118,845	-		MPMX19_02870	0.57	-1.0
118,961	+		MPMX19_02870	0.59	-2.3
118,961	+		MPMX19_02870	0.59	+0.6
118,961	+		MPMX19_02870	0.59	+0.0
118,961	+		MPMX19_02870	0.59	+1.2
118,961	+		MPMX19_02870	0.59	-1.0
119,909	+		MPMX19_02870	0.78	-0.4
119,909	+		MPMX19_02870	0.78	+0.3
119,910	-		MPMX19_02870	0.78	-0.4
119,910	-		MPMX19_02870	0.78	+0.6
120,110	+		MPMX19_02870	0.82	-0.2
120,110	+		MPMX19_02870	0.82	-1.4
120,110	+		MPMX19_02870	0.82	+1.2
120,110	+		MPMX19_02870	0.82	-1.0
120,110	+		MPMX19_02870	0.82	-0.4
120,410	+		MPMX19_02870	0.88	-0.6
120,410	+		MPMX19_02870	0.88	-2.2
120,410	+		MPMX19_02870	0.88	-0.3
120,410	+		MPMX19_02870	0.88	+1.6
120,410	+		MPMX19_02870	0.88	-0.8
120,411	-		MPMX19_02870	0.88	+0.0
120,411	-		MPMX19_02870	0.88	-0.4
120,411	-		MPMX19_02870	0.88	+0.6
120,431	+		MPMX19_02870	0.88	-0.7
120,431	+		MPMX19_02870	0.88	-1.6
120,431	+		MPMX19_02870	0.88	+0.3
120,431	+		MPMX19_02870	0.88	-0.4
120,431	+		MPMX19_02870	0.88	-0.7
120,431	+		MPMX19_02870	0.88	-1.2
120,431	+		MPMX19_02870	0.88	-0.4
120,432	-		MPMX19_02870	0.88	-0.6
120,432	-		MPMX19_02870	0.88	+0.4
120,432	-		MPMX19_02870	0.88	-1.0
120,432	-		MPMX19_02870	0.88	-2.1
120,432	-		MPMX19_02870	0.88	-1.4
120,491	+		MPMX19_02870	0.89	-1.2
120,491	+		MPMX19_02870	0.89	-2.1
120,491	+		MPMX19_02870	0.89	-0.6
120,491	+		MPMX19_02870	0.89	-0.4
120,491	+		MPMX19_02870	0.89	-1.5
120,491	+		MPMX19_02870	0.89	-0.9
120,492	-		MPMX19_02870	0.89	-1.4
120,492	-		MPMX19_02870	0.89	-1.2
120,492	-		MPMX19_02870	0.89	-1.9
120,492	-		MPMX19_02870	0.89	-1.7
120,492	-		MPMX19_02870	0.89	+0.6
120,492	-		MPMX19_02870	0.89	+1.0
120,492	-		MPMX19_02870	0.89	-0.7
121,012	+				+0.6
121,013	-				-1.9
121,013	-				-0.5
121,013	-				+0.0
121,352	+		MPMX19_02871	0.25	-0.4
121,536	-		MPMX19_02871	0.44	-1.0
121,536	-		MPMX19_02871	0.44	-1.4
121,583	+		MPMX19_02871	0.49	-0.3
121,583	+		MPMX19_02871	0.49	+1.6
121,583	+		MPMX19_02871	0.49	+0.6
121,583	+		MPMX19_02871	0.49	+1.0
121,583	+		MPMX19_02871	0.49	-0.1
121,584	-		MPMX19_02871	0.49	-0.6
121,584	-		MPMX19_02871	0.49	-0.4
121,744	+		MPMX19_02871	0.66	-0.4
121,744	+		MPMX19_02871	0.66	-0.1
121,744	+		MPMX19_02871	0.66	-0.7
121,745	-		MPMX19_02871	0.66	+0.0
121,745	-		MPMX19_02871	0.66	-0.7
121,745	-		MPMX19_02871	0.66	-1.4
121,803	-		MPMX19_02871	0.72	+0.6