Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02024

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,114,219	+		MPMX19_02023	0.65	-0.1
2,114,219	+		MPMX19_02023	0.65	+0.0
2,114,219	+		MPMX19_02023	0.65	-0.6
2,114,219	+		MPMX19_02023	0.65	+0.3
2,114,219	+		MPMX19_02023	0.65	-0.2
2,114,219	+		MPMX19_02023	0.65	-0.7
2,114,219	+		MPMX19_02023	0.65	+0.3
2,114,219	+		MPMX19_02023	0.65	-1.8
2,114,219	+		MPMX19_02023	0.65	-1.2
2,114,220	-		MPMX19_02023	0.65	-0.4
2,114,220	-		MPMX19_02023	0.65	+0.0
2,114,220	-		MPMX19_02023	0.65	-1.4
2,114,220	-		MPMX19_02023	0.65	-1.4
2,114,220	-		MPMX19_02023	0.65	-2.1
2,114,220	-		MPMX19_02023	0.65	+0.5
2,114,220	-		MPMX19_02023	0.65	+0.0
2,114,220	-		MPMX19_02023	0.65	+1.9
2,114,220	-		MPMX19_02023	0.65	-0.4
2,114,936	+				+0.6
2,114,936	+				-1.2
2,114,936	+				-0.0
2,114,937	-				-1.0
2,114,937	-				-2.7
2,114,937	-				-0.4
2,114,937	-				+0.6
2,114,951	-				-0.4
2,114,951	-				-1.4
2,114,951	-				+1.6
2,114,977	+				-0.6
2,114,977	+				+1.3
2,114,977	+				+0.3
2,114,977	+				-1.0
2,114,977	+				-1.2
2,114,977	+				-0.4
2,114,977	+				-1.8
2,114,977	+				-0.7
2,114,977	+				-1.0
2,114,977	+				+0.2
2,114,977	+				-1.6
2,114,977	+				-0.7
2,114,977	+				-1.4
2,114,977	+				+0.3
2,114,977	+				+0.4
2,114,977	+				-1.1
2,114,977	+				-1.0
2,114,977	+				+0.5
2,114,977	+				-0.4
2,114,977	+				-0.4
2,114,977	+				-0.1
2,114,977	+				-1.0
2,114,977	+				-0.7
2,114,978	-				+1.6
2,114,978	-				+0.7
2,114,978	-				-1.3
2,114,978	-				+0.3
2,114,978	-				-1.7
2,114,978	-				-0.4
2,114,978	-				-1.3
2,114,978	-				+0.6
2,114,978	-				-0.0
2,114,978	-				-0.4
2,114,978	-				+0.6
2,114,978	-				-0.2
2,114,978	-				-0.4
2,114,978	-				+1.3
2,114,978	-				+0.6
2,114,978	-				+1.0
2,114,978	-				-0.0
2,114,978	-				+2.0
2,114,978	-				-0.7
2,114,978	-				-2.1
2,114,978	-				-1.0
2,114,978	-				+0.1
2,114,978	-				-1.7
2,115,124	+		MPMX19_02024	0.14	-1.2
2,115,124	+		MPMX19_02024	0.14	+0.2
2,115,247	+		MPMX19_02024	0.24	-0.4
2,115,247	+		MPMX19_02024	0.24	-0.9
2,115,247	+		MPMX19_02024	0.24	-0.6
2,115,247	+		MPMX19_02024	0.24	+0.6
2,115,488	+		MPMX19_02024	0.45	-2.2
2,115,488	+		MPMX19_02024	0.45	+1.0
2,115,489	-		MPMX19_02024	0.45	-0.0
2,115,489	-		MPMX19_02024	0.45	-0.9
2,115,489	-		MPMX19_02024	0.45	+0.6
2,115,621	+		MPMX19_02024	0.56	+0.6
2,115,796	+		MPMX19_02024	0.71	-0.2
2,115,797	-		MPMX19_02024	0.71	-0.0
2,115,877	+		MPMX19_02024	0.78	+0.6
2,115,877	+		MPMX19_02024	0.78	-1.6
2,115,877	+		MPMX19_02024	0.78	+0.3
2,115,877	+		MPMX19_02024	0.78	+0.6
2,115,877	+		MPMX19_02024	0.78	-0.7
2,115,877	+		MPMX19_02024	0.78	+0.7
2,115,877	+		MPMX19_02024	0.78	+1.0
2,115,877	+		MPMX19_02024	0.78	-1.6
2,115,877	+		MPMX19_02024	0.78	-1.6
2,115,877	+		MPMX19_02024	0.78	+0.8
2,115,877	+		MPMX19_02024	0.78	-0.4
2,115,877	+		MPMX19_02024	0.78	-1.2
2,115,878	-		MPMX19_02024	0.78	+0.3
2,115,878	-		MPMX19_02024	0.78	-0.6
2,115,878	-		MPMX19_02024	0.78	+1.0
2,115,878	-		MPMX19_02024	0.78	-0.6
2,115,878	-		MPMX19_02024	0.78	+2.2
2,115,878	-		MPMX19_02024	0.78	-0.6
2,115,878	-		MPMX19_02024	0.78	+0.6
2,115,878	-		MPMX19_02024	0.78	+0.6
2,115,878	-		MPMX19_02024	0.78	-0.4
2,115,878	-		MPMX19_02024	0.78	-0.5
2,115,878	-		MPMX19_02024	0.78	+0.6
2,115,916	+		MPMX19_02024	0.81	-2.1
2,115,916	+		MPMX19_02024	0.81	-1.3
2,115,916	+		MPMX19_02024	0.81	-1.4
2,115,916	+		MPMX19_02024	0.81	+1.6
2,115,917	-		MPMX19_02024	0.81	-0.2
2,115,917	-		MPMX19_02024	0.81	-1.2
2,115,917	-		MPMX19_02024	0.81	+0.3
2,116,105	+				-0.0
2,116,105	+				-1.7
2,116,105	+				+1.0
2,116,105	+				-1.9
2,116,105	+				+0.3
2,116,105	+				+0.6
2,116,105	+				+0.7
2,116,105	+				-2.7
2,116,105	+				-1.9
2,116,105	+				-0.7
2,116,105	+				-1.0
2,116,105	+				+0.2
2,116,105	+				+0.7
2,116,105	+				+1.6
2,116,105	+				-1.0
2,116,105	+				-0.0
2,116,105	+				-2.7
2,116,105	+				+1.3
2,116,105	+				-0.0
2,116,105	+				+0.8
2,116,105	+				+0.2
2,116,105	+				-0.0
2,116,106	-				-1.9
2,116,106	-				-1.6
2,116,106	-				-1.4
2,116,106	-				+0.3
2,116,106	-				-0.4
2,116,106	-				-1.0
2,116,106	-				-0.4
2,116,106	-				-1.4
2,116,106	-				-1.2
2,116,106	-				-2.1
2,116,106	-				+0.6
2,116,106	-				-0.7
2,116,106	-				+0.6
2,116,106	-				-0.9
2,116,106	-				-1.2
2,116,106	-				+0.6
2,116,106	-				+0.6
2,116,106	-				-1.4
2,116,106	-				-0.0
2,116,106	-				+0.0
2,116,106	-				-0.6
2,116,106	-				-0.3
2,116,106	-				-0.6
2,116,106	-				-2.1
2,116,106	-				-1.4
2,116,106	-				-0.4
2,116,106	-				-0.0
2,116,191	+				+0.6
2,116,191	+				-0.4
2,116,191	+				-1.0
2,116,191	+				-0.7
2,116,191	+				-1.0
2,116,191	+				-1.7
2,116,192	-				-0.0
2,116,192	-				-0.7
2,116,281	+		MPMX19_02025	0.16	-1.1
2,116,281	+		MPMX19_02025	0.16	-0.5
2,116,281	+		MPMX19_02025	0.16	-1.2
2,116,281	+		MPMX19_02025	0.16	-1.4
2,116,281	+		MPMX19_02025	0.16	+0.6
2,116,281	+		MPMX19_02025	0.16	-1.5
2,116,281	+		MPMX19_02025	0.16	+1.0
2,116,281	+		MPMX19_02025	0.16	-2.0
2,116,281	+		MPMX19_02025	0.16	+0.6
2,116,281	+		MPMX19_02025	0.16	+2.2
2,116,282	-		MPMX19_02025	0.16	-0.5
2,116,282	-		MPMX19_02025	0.16	-2.6
2,116,282	-		MPMX19_02025	0.16	-0.6
2,116,282	-		MPMX19_02025	0.16	-0.0
2,116,282	-		MPMX19_02025	0.16	-0.6
2,116,282	-		MPMX19_02025	0.16	+0.6
2,116,282	-		MPMX19_02025	0.16	-0.4
2,116,282	-		MPMX19_02025	0.16	+1.6
2,116,282	-		MPMX19_02025	0.16	-0.4
2,116,282	-		MPMX19_02025	0.16	-0.6
2,116,500	+		MPMX19_02025	0.40	-0.0
2,116,500	+		MPMX19_02025	0.40	-0.6
2,116,501	-		MPMX19_02025	0.40	-0.7
2,116,501	-		MPMX19_02025	0.40	+0.6
2,116,512	+		MPMX19_02025	0.41	+3.2
2,116,512	+		MPMX19_02025	0.41	-0.7
2,116,512	+		MPMX19_02025	0.41	+1.0
2,116,512	+		MPMX19_02025	0.41	-0.2
2,116,512	+		MPMX19_02025	0.41	+0.3
2,116,512	+		MPMX19_02025	0.41	-0.0
2,116,512	+		MPMX19_02025	0.41	-0.4
2,116,512	+		MPMX19_02025	0.41	-1.8
2,116,512	+		MPMX19_02025	0.41	+0.6
2,116,512	+		MPMX19_02025	0.41	-1.7
2,116,512	+		MPMX19_02025	0.41	-0.0
2,116,512	+		MPMX19_02025	0.41	-0.7
2,116,512	+		MPMX19_02025	0.41	+0.3
2,116,512	+		MPMX19_02025	0.41	-0.2
2,116,513	-		MPMX19_02025	0.41	+0.8
2,116,513	-		MPMX19_02025	0.41	-0.0
2,116,513	-		MPMX19_02025	0.41	-1.6
2,116,513	-		MPMX19_02025	0.41	-0.7
2,116,513	-		MPMX19_02025	0.41	-1.0
2,116,513	-		MPMX19_02025	0.41	+0.5
2,116,513	-		MPMX19_02025	0.41	+0.6
2,116,956	+		MPMX19_02025	0.90	-0.6
2,116,956	+		MPMX19_02025	0.90	-0.9
2,116,956	+		MPMX19_02025	0.90	-1.4
2,116,956	+		MPMX19_02025	0.90	-0.4
2,116,956	+		MPMX19_02025	0.90	-1.4
2,116,956	+		MPMX19_02025	0.90	+0.3
2,116,956	+		MPMX19_02025	0.90	-2.1
2,116,956	+		MPMX19_02025	0.90	-1.4
2,116,956	+		MPMX19_02025	0.90	-1.0
2,116,956	+		MPMX19_02025	0.90	-0.8
2,116,956	+		MPMX19_02025	0.90	-1.2
2,116,956	+		MPMX19_02025	0.90	+0.3
2,116,956	+		MPMX19_02025	0.90	-0.7
2,116,956	+		MPMX19_02025	0.90	-0.7
2,116,956	+		MPMX19_02025	0.90	-1.0
2,116,956	+		MPMX19_02025	0.90	-0.4
2,116,956	+		MPMX19_02025	0.90	-0.4
2,116,956	+		MPMX19_02025	0.90	-1.9
2,116,956	+		MPMX19_02025	0.90	-1.7
2,116,956	+		MPMX19_02025	0.90	-1.0
2,116,956	+		MPMX19_02025	0.90	-0.0
2,116,956	+		MPMX19_02025	0.90	-0.4
2,116,956	+		MPMX19_02025	0.90	-0.4
2,116,956	+		MPMX19_02025	0.90	+0.4
2,116,957	-		MPMX19_02025	0.90	+0.8
2,116,957	-		MPMX19_02025	0.90	+1.0
2,116,957	-		MPMX19_02025	0.90	-1.4
2,116,957	-		MPMX19_02025	0.90	+1.1
2,116,957	-		MPMX19_02025	0.90	-1.4
2,116,957	-		MPMX19_02025	0.90	-0.4
2,116,957	-		MPMX19_02025	0.90	+0.6
2,116,957	-		MPMX19_02025	0.90	+1.6
2,116,957	-		MPMX19_02025	0.90	+1.2
2,116,957	-		MPMX19_02025	0.90	-1.6
2,116,957	-		MPMX19_02025	0.90	-1.0
2,116,957	-		MPMX19_02025	0.90	-0.7
2,116,957	-		MPMX19_02025	0.90	-0.2
2,116,957	-		MPMX19_02025	0.90	-0.7
2,116,957	-		MPMX19_02025	0.90	-0.0
2,116,965	+				-0.0
2,116,965	+				-0.1
2,116,965	+				-0.0
2,116,965	+				+1.6
2,116,965	+				+0.6
2,116,965	+				+0.6
2,116,966	-				-1.0
2,116,966	-				-0.7
2,116,966	-				-2.1
2,117,011	+				+0.8
2,117,011	+				+0.4
2,117,012	-				-1.7
2,117,012	-				-0.4
2,117,012	-				-1.0
2,117,012	-				-0.7
2,117,012	-				-0.4