Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01547 and MPMX19_01548 are separated by 286 nucleotides MPMX19_01548 and MPMX19_01549 are separated by 112 nucleotides
MPMX19_01547: MPMX19_01547 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,621,722 to 1,622,984
_01547
MPMX19_01548: MPMX19_01548 - ATP-dependent Clp protease proteolytic subunit, at 1,623,271 to 1,623,897
_01548
MPMX19_01549: MPMX19_01549 - Trigger factor, at 1,624,010 to 1,625,353
_01549
Position (kb)
1623
1624 Strain fitness (log2 ratio)
-2
-1
0
1 at 1623.060 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.984 kb on - strand at 1624.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 1,623,060 - -0.6 1,623,959 - -2.1 1,623,959 - +0.0 1,623,959 - -2.0 1,623,959 - -0.4 1,623,959 - +0.3 1,623,959 - +1.3 1,623,959 - +1.0 1,623,959 - +0.6 1,623,959 - -0.2 1,623,959 - -1.1 1,623,959 - +0.3 1,623,959 - -0.7 1,623,959 - +1.6 1,623,959 - +0.6 1,623,959 - -0.7 1,623,961 - -1.2 1,623,961 - -0.7 1,623,961 - +0.9 1,623,961 - +1.3 1,623,961 - -0.1 1,623,961 - +0.0 1,623,961 - -0.3 1,623,961 - +1.6 1,623,961 - -0.6 1,623,984 - +0.3 1,624,012 - -0.4
Or see this region's nucleotide sequence