Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01311 and MPMX19_01312 are separated by 305 nucleotides MPMX19_01312 and MPMX19_01313 are separated by 557 nucleotides
MPMX19_01311: MPMX19_01311 - Protein-L-isoaspartate O-methyltransferase, at 1,368,788 to 1,369,444
_01311
MPMX19_01312: MPMX19_01312 - tRNA-Cys, at 1,369,750 to 1,369,823
_01312
MPMX19_01313: MPMX19_01313 - DNA-invertase hin, at 1,370,381 to 1,370,938
_01313
Position (kb) 1369
1370 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.519 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.521 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.523 kb on - strand at 1369.560 kb on + strand at 1369.560 kb on + strand at 1369.561 kb on - strand at 1369.860 kb on + strand at 1369.873 kb on + strand at 1369.874 kb on - strand at 1369.874 kb on - strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.987 kb on + strand at 1369.988 kb on - strand at 1369.988 kb on - strand at 1369.988 kb on - strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.091 kb on + strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.092 kb on - strand at 1370.152 kb on + strand at 1370.152 kb on + strand at 1370.152 kb on + strand at 1370.153 kb on - strand at 1370.218 kb on + strand at 1370.218 kb on + strand at 1370.219 kb on - strand at 1370.241 kb on + strand at 1370.242 kb on - strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.279 kb on + strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.280 kb on - strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.357 kb on + strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.358 kb on - strand at 1370.406 kb on + strand at 1370.406 kb on + strand at 1370.407 kb on - strand at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.480 kb on + strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.481 kb on - strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.523 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.597 kb on + strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313 at 1370.598 kb on - strand, within MPMX19_01313
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 1,369,519 - -0.7 1,369,519 - +1.5 1,369,519 - -0.4 1,369,519 - -1.8 1,369,519 - -1.7 1,369,519 - -1.2 1,369,519 - +0.1 1,369,519 - +0.6 1,369,519 - -0.7 1,369,519 - -0.7 1,369,519 - -0.7 1,369,519 - -0.9 1,369,519 - -1.5 1,369,519 - -0.9 1,369,519 - -2.6 1,369,519 - -1.7 1,369,519 - -1.2 1,369,519 - +1.2 1,369,519 - +0.9 1,369,519 - -0.2 1,369,519 - -2.2 1,369,521 - -0.7 1,369,521 - -0.9 1,369,521 - +0.5 1,369,521 - -2.1 1,369,521 - -0.9 1,369,521 - -1.2 1,369,521 - -2.6 1,369,521 - -0.4 1,369,521 - +0.1 1,369,521 - -0.4 1,369,521 - -0.9 1,369,521 - -0.4 1,369,521 - -2.5 1,369,521 - +0.4 1,369,521 - -1.3 1,369,521 - -0.7 1,369,521 - +0.1 1,369,521 - -0.4 1,369,521 - -0.9 1,369,521 - +1.1 1,369,521 - +0.9 1,369,521 - -0.4 1,369,521 - -1.2 1,369,521 - +0.1 1,369,523 - -0.7 1,369,523 - -1.9 1,369,523 - -1.5 1,369,523 - +0.1 1,369,523 - -1.5 1,369,523 - +0.9 1,369,523 - -1.3 1,369,523 - -0.2 1,369,523 - +0.6 1,369,523 - -2.4 1,369,560 + +2.0 1,369,560 + -0.2 1,369,561 - +0.5 1,369,860 + -1.8 1,369,873 + -1.1 1,369,874 - -1.5 1,369,874 - -0.6 1,369,987 + -2.2 1,369,987 + +1.0 1,369,987 + +0.6 1,369,987 + -3.3 1,369,987 + +1.6 1,369,988 - -0.2 1,369,988 - +1.1 1,369,988 - -0.4 1,370,091 + -1.4 1,370,091 + -2.7 1,370,091 + -0.7 1,370,091 + -1.8 1,370,091 + -0.2 1,370,091 + -0.2 1,370,091 + +1.1 1,370,091 + +0.6 1,370,091 + -1.7 1,370,092 - -0.9 1,370,092 - +1.6 1,370,092 - +1.2 1,370,092 - -1.2 1,370,092 - +0.3 1,370,092 - +0.2 1,370,092 - +0.4 1,370,092 - -1.5 1,370,092 - +0.5 1,370,152 + -1.4 1,370,152 + -1.2 1,370,152 + -2.3 1,370,153 - +0.1 1,370,218 + +0.6 1,370,218 + -0.4 1,370,219 - -0.4 1,370,241 + -0.9 1,370,242 - +0.3 1,370,279 + -1.2 1,370,279 + -1.9 1,370,279 + -0.2 1,370,279 + +0.1 1,370,279 + -1.8 1,370,280 - -0.4 1,370,280 - -0.7 1,370,280 - +1.9 1,370,280 - +1.6 1,370,280 - +0.1 1,370,280 - -1.7 1,370,357 + +0.1 1,370,357 + -0.7 1,370,357 + -1.2 1,370,357 + -0.5 1,370,358 - -0.4 1,370,358 - +0.6 1,370,358 - -1.5 1,370,358 - +0.6 1,370,358 - +0.6 1,370,358 - -0.5 1,370,406 + +0.1 1,370,406 + -1.2 1,370,407 - -0.4 1,370,480 + MPMX19_01313 0.18 +1.6 1,370,480 + MPMX19_01313 0.18 -0.9 1,370,480 + MPMX19_01313 0.18 -0.9 1,370,480 + MPMX19_01313 0.18 +0.4 1,370,480 + MPMX19_01313 0.18 -0.9 1,370,480 + MPMX19_01313 0.18 -1.2 1,370,480 + MPMX19_01313 0.18 +0.1 1,370,480 + MPMX19_01313 0.18 -0.7 1,370,480 + MPMX19_01313 0.18 -0.8 1,370,480 + MPMX19_01313 0.18 +0.6 1,370,480 + MPMX19_01313 0.18 +1.6 1,370,480 + MPMX19_01313 0.18 -0.2 1,370,480 + MPMX19_01313 0.18 -0.2 1,370,480 + MPMX19_01313 0.18 -0.5 1,370,480 + MPMX19_01313 0.18 -0.9 1,370,480 + MPMX19_01313 0.18 -1.4 1,370,480 + MPMX19_01313 0.18 +0.6 1,370,480 + MPMX19_01313 0.18 -2.3 1,370,480 + MPMX19_01313 0.18 -0.9 1,370,480 + MPMX19_01313 0.18 -2.4 1,370,480 + MPMX19_01313 0.18 -0.5 1,370,480 + MPMX19_01313 0.18 +0.1 1,370,480 + MPMX19_01313 0.18 -1.5 1,370,480 + MPMX19_01313 0.18 +0.1 1,370,480 + MPMX19_01313 0.18 -1.2 1,370,480 + MPMX19_01313 0.18 -1.0 1,370,480 + MPMX19_01313 0.18 -0.4 1,370,480 + MPMX19_01313 0.18 -0.5 1,370,480 + MPMX19_01313 0.18 -2.1 1,370,480 + MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 +2.1 1,370,481 - MPMX19_01313 0.18 +0.6 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -1.4 1,370,481 - MPMX19_01313 0.18 -1.7 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -1.5 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -0.3 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -1.7 1,370,481 - MPMX19_01313 0.18 +0.3 1,370,481 - MPMX19_01313 0.18 +0.1 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.9 1,370,481 - MPMX19_01313 0.18 -1.2 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -0.2 1,370,481 - MPMX19_01313 0.18 -1.4 1,370,481 - MPMX19_01313 0.18 +0.8 1,370,481 - MPMX19_01313 0.18 -1.5 1,370,481 - MPMX19_01313 0.18 +0.4 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -2.3 1,370,481 - MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 +1.6 1,370,481 - MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 -0.7 1,370,481 - MPMX19_01313 0.18 -0.1 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 +0.1 1,370,481 - MPMX19_01313 0.18 -1.4 1,370,481 - MPMX19_01313 0.18 -1.4 1,370,481 - MPMX19_01313 0.18 -0.8 1,370,481 - MPMX19_01313 0.18 -0.4 1,370,481 - MPMX19_01313 0.18 -0.9 1,370,523 + MPMX19_01313 0.25 -2.6 1,370,523 + MPMX19_01313 0.25 -1.5 1,370,523 + MPMX19_01313 0.25 -1.8 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 -1.1 1,370,523 + MPMX19_01313 0.25 -0.9 1,370,523 + MPMX19_01313 0.25 +0.1 1,370,523 + MPMX19_01313 0.25 -1.5 1,370,523 + MPMX19_01313 0.25 -1.4 1,370,523 + MPMX19_01313 0.25 -1.8 1,370,523 + MPMX19_01313 0.25 +0.8 1,370,523 + MPMX19_01313 0.25 +1.1 1,370,523 + MPMX19_01313 0.25 -1.9 1,370,523 + MPMX19_01313 0.25 -0.4 1,370,523 + MPMX19_01313 0.25 -2.5 1,370,523 + MPMX19_01313 0.25 +0.1 1,370,523 + MPMX19_01313 0.25 -0.9 1,370,523 + MPMX19_01313 0.25 -1.8 1,370,523 + MPMX19_01313 0.25 -0.5 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,523 + MPMX19_01313 0.25 +0.3 1,370,523 + MPMX19_01313 0.25 +0.1 1,370,523 + MPMX19_01313 0.25 -1.4 1,370,523 + MPMX19_01313 0.25 -1.5 1,370,523 + MPMX19_01313 0.25 -0.5 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,523 + MPMX19_01313 0.25 +0.6 1,370,523 + MPMX19_01313 0.25 -0.9 1,370,523 + MPMX19_01313 0.25 -0.3 1,370,523 + MPMX19_01313 0.25 -1.2 1,370,523 + MPMX19_01313 0.25 +0.1 1,370,523 + MPMX19_01313 0.25 -1.1 1,370,523 + MPMX19_01313 0.25 -0.2 1,370,523 + MPMX19_01313 0.25 -1.8 1,370,523 + MPMX19_01313 0.25 -0.9 1,370,523 + MPMX19_01313 0.25 -0.4 1,370,523 + MPMX19_01313 0.25 -0.7 1,370,597 + MPMX19_01313 0.39 -0.7 1,370,597 + MPMX19_01313 0.39 +0.1 1,370,597 + MPMX19_01313 0.39 -0.5 1,370,597 + MPMX19_01313 0.39 -1.4 1,370,597 + MPMX19_01313 0.39 +0.3 1,370,597 + MPMX19_01313 0.39 -0.4 1,370,597 + MPMX19_01313 0.39 +0.4 1,370,597 + MPMX19_01313 0.39 -1.4 1,370,597 + MPMX19_01313 0.39 -1.4 1,370,597 + MPMX19_01313 0.39 -1.5 1,370,597 + MPMX19_01313 0.39 -1.8 1,370,597 + MPMX19_01313 0.39 +0.3 1,370,597 + MPMX19_01313 0.39 +1.2 1,370,598 - MPMX19_01313 0.39 -1.0 1,370,598 - MPMX19_01313 0.39 -1.2 1,370,598 - MPMX19_01313 0.39 -1.8 1,370,598 - MPMX19_01313 0.39 -1.2 1,370,598 - MPMX19_01313 0.39 -0.4
Or see this region's nucleotide sequence