Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01157

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,195,131	+		MPMX19_01156	0.38	+1.1
1,195,131	+		MPMX19_01156	0.38	+0.5
1,195,131	+		MPMX19_01156	0.38	+0.1
1,195,132	-		MPMX19_01156	0.38	-0.3
1,195,132	-		MPMX19_01156	0.38	-1.1
1,195,132	-		MPMX19_01156	0.38	-0.3
1,195,177	-		MPMX19_01156	0.42	+0.1
1,195,177	-		MPMX19_01156	0.42	-2.6
1,195,212	+		MPMX19_01156	0.44	-1.9
1,195,212	+		MPMX19_01156	0.44	+0.9
1,195,212	+		MPMX19_01156	0.44	-0.6
1,195,212	+		MPMX19_01156	0.44	+1.3
1,195,212	+		MPMX19_01156	0.44	-0.5
1,195,212	+		MPMX19_01156	0.44	+0.1
1,195,212	+		MPMX19_01156	0.44	+0.8
1,195,212	+		MPMX19_01156	0.44	-0.6
1,195,212	+		MPMX19_01156	0.44	+0.1
1,195,212	+		MPMX19_01156	0.44	+0.1
1,195,212	+		MPMX19_01156	0.44	+0.8
1,195,212	+		MPMX19_01156	0.44	+0.1
1,195,212	+		MPMX19_01156	0.44	-0.6
1,195,212	+		MPMX19_01156	0.44	-0.6
1,195,212	+		MPMX19_01156	0.44	-1.3
1,195,212	+		MPMX19_01156	0.44	-0.9
1,195,212	+		MPMX19_01156	0.44	-1.5
1,195,212	+		MPMX19_01156	0.44	+1.1
1,195,212	+		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	+1.3
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	-1.0
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	-1.1
1,195,213	-		MPMX19_01156	0.44	-0.1
1,195,213	-		MPMX19_01156	0.44	+1.7
1,195,213	-		MPMX19_01156	0.44	-1.3
1,195,213	-		MPMX19_01156	0.44	+0.7
1,195,213	-		MPMX19_01156	0.44	-0.9
1,195,213	-		MPMX19_01156	0.44	+0.7
1,195,213	-		MPMX19_01156	0.44	-1.5
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	-1.5
1,195,213	-		MPMX19_01156	0.44	-1.1
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	+0.4
1,195,213	-		MPMX19_01156	0.44	+0.7
1,195,213	-		MPMX19_01156	0.44	-2.1
1,195,213	-		MPMX19_01156	0.44	-0.4
1,195,213	-		MPMX19_01156	0.44	-1.1
1,195,213	-		MPMX19_01156	0.44	-0.1
1,195,213	-		MPMX19_01156	0.44	-0.6
1,195,213	-		MPMX19_01156	0.44	-2.4
1,195,213	-		MPMX19_01156	0.44	+0.7
1,195,213	-		MPMX19_01156	0.44	-1.8
1,195,213	-		MPMX19_01156	0.44	+1.1
1,195,213	-		MPMX19_01156	0.44	+1.1
1,195,213	-		MPMX19_01156	0.44	-0.9
1,195,213	-		MPMX19_01156	0.44	-1.9
1,195,213	-		MPMX19_01156	0.44	-0.6
1,195,213	-		MPMX19_01156	0.44	-0.1
1,195,213	-		MPMX19_01156	0.44	-0.9
1,195,242	+		MPMX19_01156	0.47	+1.4
1,195,242	+		MPMX19_01156	0.47	+0.1
1,195,243	-		MPMX19_01156	0.47	+1.7
1,195,314	+		MPMX19_01156	0.52	+0.4
1,195,314	+		MPMX19_01156	0.52	+3.3
1,195,315	-		MPMX19_01156	0.52	-0.9
1,195,315	-		MPMX19_01156	0.52	+0.7
1,195,315	-		MPMX19_01156	0.52	-0.1
1,195,315	-		MPMX19_01156	0.52	-1.3
1,195,343	+		MPMX19_01156	0.54	-0.9
1,195,375	-		MPMX19_01156	0.57	+0.9
1,195,432	-		MPMX19_01156	0.61	-0.6
1,195,432	-		MPMX19_01156	0.61	+0.7
1,195,432	-		MPMX19_01156	0.61	+0.1
1,195,476	+		MPMX19_01156	0.64	-0.1
1,195,476	+		MPMX19_01156	0.64	-0.1
1,195,476	+		MPMX19_01156	0.64	-0.6
1,195,476	+		MPMX19_01156	0.64	+0.7
1,195,476	+		MPMX19_01156	0.64	-1.1
1,195,476	+		MPMX19_01156	0.64	-0.9
1,195,476	+		MPMX19_01156	0.64	-2.1
1,195,476	+		MPMX19_01156	0.64	+2.7
1,195,476	+		MPMX19_01156	0.64	-1.3
1,195,476	+		MPMX19_01156	0.64	-0.6
1,195,477	+		MPMX19_01156	0.64	-0.9
1,195,477	-		MPMX19_01156	0.64	-1.4
1,195,477	-		MPMX19_01156	0.64	+1.7
1,195,477	-		MPMX19_01156	0.64	-0.5
1,195,477	-		MPMX19_01156	0.64	-1.7
1,195,477	-		MPMX19_01156	0.64	+0.1
1,195,477	-		MPMX19_01156	0.64	+0.4
1,195,477	-		MPMX19_01156	0.64	-1.1
1,195,477	-		MPMX19_01156	0.64	+0.7
1,195,477	-		MPMX19_01156	0.64	+0.7
1,195,477	-		MPMX19_01156	0.64	-1.1
1,195,689	+		MPMX19_01156	0.80	-0.3
1,195,689	+		MPMX19_01156	0.80	+0.1
1,195,689	+		MPMX19_01156	0.80	-0.9
1,195,689	+		MPMX19_01156	0.80	-1.8
1,195,689	+		MPMX19_01156	0.80	-1.3
1,195,689	+		MPMX19_01156	0.80	-2.9
1,195,689	+		MPMX19_01156	0.80	-0.6
1,195,689	+		MPMX19_01156	0.80	-0.3
1,195,689	+		MPMX19_01156	0.80	-1.1
1,195,689	+		MPMX19_01156	0.80	-2.4
1,195,689	+		MPMX19_01156	0.80	-1.9
1,195,689	+		MPMX19_01156	0.80	-1.6
1,195,689	+		MPMX19_01156	0.80	-0.6
1,195,690	-		MPMX19_01156	0.80	-0.1
1,195,690	-		MPMX19_01156	0.80	-0.5
1,195,690	-		MPMX19_01156	0.80	-1.8
1,195,690	-		MPMX19_01156	0.80	-1.3
1,195,690	-		MPMX19_01156	0.80	-0.3
1,195,690	-		MPMX19_01156	0.80	-1.0
1,195,690	-		MPMX19_01156	0.80	-0.9
1,195,690	-		MPMX19_01156	0.80	-1.3
1,195,690	-		MPMX19_01156	0.80	-1.1
1,195,690	-		MPMX19_01156	0.80	+0.1
1,195,690	-		MPMX19_01156	0.80	-1.6
1,195,690	-		MPMX19_01156	0.80	-0.6
1,195,690	-		MPMX19_01156	0.80	-1.1
1,195,690	-		MPMX19_01156	0.80	-0.5
1,195,690	-		MPMX19_01156	0.80	-0.5
1,195,833	+				-0.9
1,195,833	+				-1.1
1,195,833	+				-3.1
1,195,833	+				-0.3
1,195,834	-				-1.0
1,195,911	+				-0.6
1,195,911	+				-0.1
1,195,911	+				+0.1
1,195,912	-				-2.3
1,195,912	-				-0.6
1,195,912	-				+0.5
1,195,967	+				-1.8
1,195,967	+				-1.6
1,195,968	-				-0.9
1,195,968	-				-1.6
1,195,968	-				-0.9
1,195,968	-				-0.5
1,195,984	-				+0.7
1,196,000	+				-0.7
1,196,366	+		MPMX19_01157	0.43	-0.3
1,196,366	+		MPMX19_01157	0.43	-0.5
1,196,366	+		MPMX19_01157	0.43	-1.3
1,196,366	+		MPMX19_01157	0.43	-0.6
1,196,367	-		MPMX19_01157	0.43	-1.1
1,196,367	-		MPMX19_01157	0.43	-1.1
1,196,367	-		MPMX19_01157	0.43	-0.5
1,196,367	-		MPMX19_01157	0.43	-0.8
1,196,367	-		MPMX19_01157	0.43	+0.1
1,196,468	+		MPMX19_01157	0.55	-0.6
1,196,468	+		MPMX19_01157	0.55	-0.9
1,196,468	+		MPMX19_01157	0.55	-1.1
1,196,468	+		MPMX19_01157	0.55	-2.3
1,196,468	+		MPMX19_01157	0.55	-1.3
1,196,468	+		MPMX19_01157	0.55	-0.1
1,196,468	+		MPMX19_01157	0.55	+0.4
1,196,468	+		MPMX19_01157	0.55	-0.6
1,196,468	+		MPMX19_01157	0.55	+0.8
1,196,468	+		MPMX19_01157	0.55	-0.6
1,196,468	+		MPMX19_01157	0.55	-2.1
1,196,468	+		MPMX19_01157	0.55	-0.9
1,196,469	-		MPMX19_01157	0.55	+0.1
1,196,469	-		MPMX19_01157	0.55	-0.6
1,196,469	-		MPMX19_01157	0.55	-1.6
1,196,469	-		MPMX19_01157	0.55	-2.2
1,196,469	-		MPMX19_01157	0.55	-0.1
1,196,469	-		MPMX19_01157	0.55	-1.3
1,196,469	-		MPMX19_01157	0.55	-0.9
1,196,469	-		MPMX19_01157	0.55	-1.3
1,196,469	-		MPMX19_01157	0.55	-0.9
1,196,611	+		MPMX19_01157	0.72	-0.6
1,196,612	-		MPMX19_01157	0.72	-1.1
1,196,628	-		MPMX19_01157	0.74	+0.1
1,196,628	-		MPMX19_01157	0.74	-0.9
1,196,729	+		MPMX19_01157	0.86	-0.3
1,196,729	+		MPMX19_01157	0.86	-0.6
1,196,729	+		MPMX19_01157	0.86	-1.1
1,196,729	+		MPMX19_01157	0.86	-0.3
1,196,730	-		MPMX19_01157	0.86	-0.9
1,196,730	-		MPMX19_01157	0.86	-0.6
1,196,798	+				+0.1
1,196,799	-				-0.9
1,196,822	+				+1.1
1,196,822	+				-0.3
1,196,822	+				-0.9
1,196,822	+				-0.3
1,196,823	-				-1.8
1,196,823	-				-0.6
1,196,911	+				-0.9
1,196,911	+				-1.3
1,196,911	+				-0.7
1,196,911	+				-0.3
1,196,911	+				-0.7
1,196,911	+				+1.3
1,196,911	+				-2.4
1,196,911	+				-0.9
1,196,911	+				-1.1
1,196,911	+				-1.3
1,196,911	+				-0.7
1,196,912	-				-1.3
1,196,912	-				+0.7
1,196,912	-				-0.0
1,196,912	-				-0.3
1,196,917	+				-0.5
1,196,917	+				-0.9
1,196,917	+				-0.8
1,196,917	+				-0.7
1,196,917	+				+0.1
1,196,917	+				-0.3
1,196,917	+				-0.7
1,196,917	+				-0.1
1,196,917	+				-1.3
1,196,917	+				-0.7
1,196,917	+				-2.0
1,196,917	+				+0.3
1,196,918	-				+0.1
1,196,918	-				+0.2
1,196,918	-				-1.0
1,196,918	-				-0.2
1,196,918	-				-0.5
1,196,918	-				+1.7
1,196,918	-				-0.4
1,196,918	-				-0.1
1,196,918	-				-0.7
1,196,918	-				-1.3
1,196,918	-				-0.8
1,196,918	-				-0.9
1,196,918	-				+0.1
1,196,918	-				-0.0
1,196,918	-				-2.7
1,196,918	-				-1.8
1,196,918	-				-0.9
1,196,919	+				-2.1
1,196,919	+				+0.1
1,196,919	+				-1.8
1,196,919	+				-0.3
1,196,919	+				-0.3
1,196,919	+				-1.1
1,196,919	+				+0.3
1,196,919	+				+1.3
1,196,920	-				-1.5
1,196,920	-				+0.3
1,196,920	-				-2.1
1,196,920	-				-0.1
1,196,920	-				-1.3
1,196,920	-				-0.7
1,196,920	-				+0.1
1,196,920	-				-0.7
1,196,920	-				-0.9
1,196,920	-				-1.1
1,196,920	-				-1.1
1,196,920	-				-0.9
1,196,920	-				-1.9
1,196,920	-				-0.2
1,196,920	-				-1.3
1,196,920	-				-1.0
1,196,920	-				-0.9
1,197,109	+		MPMX19_01158	0.23	+2.1
1,197,109	+		MPMX19_01158	0.23	-0.7
1,197,110	-		MPMX19_01158	0.23	-0.3
1,197,110	-		MPMX19_01158	0.23	-1.1
1,197,110	-		MPMX19_01158	0.23	-1.8
1,197,110	-		MPMX19_01158	0.23	-0.7
1,197,178	+		MPMX19_01158	0.31	+0.7
1,197,178	+		MPMX19_01158	0.31	-0.5
1,197,178	+		MPMX19_01158	0.31	-1.5
1,197,178	+		MPMX19_01158	0.31	-1.7
1,197,179	-		MPMX19_01158	0.31	-1.7
1,197,179	-		MPMX19_01158	0.31	-1.4
1,197,179	-		MPMX19_01158	0.31	-2.5
1,197,179	-		MPMX19_01158	0.31	-0.3
1,197,179	-		MPMX19_01158	0.31	-1.1
1,197,179	-		MPMX19_01158	0.31	-1.3
1,197,179	-		MPMX19_01158	0.31	-0.3
1,197,179	-		MPMX19_01158	0.31	+3.7
1,197,229	+		MPMX19_01158	0.36	-2.1
1,197,229	+		MPMX19_01158	0.36	+0.1
1,197,229	+		MPMX19_01158	0.36	-0.7
1,197,229	+		MPMX19_01158	0.36	+1.7
1,197,229	+		MPMX19_01158	0.36	+0.3
1,197,230	-		MPMX19_01158	0.36	-0.9
1,197,230	-		MPMX19_01158	0.36	-0.9
1,197,230	-		MPMX19_01158	0.36	-0.3
1,197,230	-		MPMX19_01158	0.36	+0.5
1,197,230	-		MPMX19_01158	0.36	-1.0
1,197,367	+		MPMX19_01158	0.50	-0.8
1,197,367	+		MPMX19_01158	0.50	-0.3
1,197,367	+		MPMX19_01158	0.50	-0.9
1,197,367	+		MPMX19_01158	0.50	+1.3
1,197,367	+		MPMX19_01158	0.50	-1.1
1,197,367	+		MPMX19_01158	0.50	-1.5
1,197,367	+		MPMX19_01158	0.50	-2.1
1,197,368	-		MPMX19_01158	0.50	+1.1
1,197,400	+		MPMX19_01158	0.54	-0.3
1,197,401	-		MPMX19_01158	0.54	+0.7
1,197,526	+		MPMX19_01158	0.67	-0.5
1,197,526	+		MPMX19_01158	0.67	+0.2
1,197,526	+		MPMX19_01158	0.67	+0.1
1,197,526	+		MPMX19_01158	0.67	-0.9
1,197,526	+		MPMX19_01158	0.67	+0.7
1,197,526	+		MPMX19_01158	0.67	-0.2
1,197,526	+		MPMX19_01158	0.67	-1.5
1,197,526	+		MPMX19_01158	0.67	+1.3
1,197,526	+		MPMX19_01158	0.67	+0.1
1,197,526	+		MPMX19_01158	0.67	+0.3
1,197,526	+		MPMX19_01158	0.67	+0.1
1,197,526	+		MPMX19_01158	0.67	-1.7
1,197,526	+		MPMX19_01158	0.67	+1.7
1,197,526	+		MPMX19_01158	0.67	-0.7
1,197,526	+		MPMX19_01158	0.67	-0.2
1,197,526	+		MPMX19_01158	0.67	+0.1
1,197,526	+		MPMX19_01158	0.67	-0.7
1,197,527	-		MPMX19_01158	0.67	-1.9
1,197,527	-		MPMX19_01158	0.67	+0.5
1,197,527	-		MPMX19_01158	0.67	-2.2
1,197,527	-		MPMX19_01158	0.67	+0.7
1,197,527	-		MPMX19_01158	0.67	-0.3
1,197,527	-		MPMX19_01158	0.67	-2.6
1,197,527	-		MPMX19_01158	0.67	-1.8
1,197,527	-		MPMX19_01158	0.67	-1.1
1,197,527	-		MPMX19_01158	0.67	-0.9
1,197,527	-		MPMX19_01158	0.67	+0.3
1,197,527	-		MPMX19_01158	0.67	+0.1
1,197,527	-		MPMX19_01158	0.67	+0.1
1,197,527	-		MPMX19_01158	0.67	-0.8
1,197,527	-		MPMX19_01158	0.67	-0.7
1,197,527	-		MPMX19_01158	0.67	+0.3
1,197,527	-		MPMX19_01158	0.67	-1.5
1,197,527	-		MPMX19_01158	0.67	-0.7
1,197,527	-		MPMX19_01158	0.67	+1.7
1,197,527	-		MPMX19_01158	0.67	-1.1
1,197,633	+		MPMX19_01158	0.78	-1.1
1,197,633	+		MPMX19_01158	0.78	+0.1
1,197,633	+		MPMX19_01158	0.78	-2.1
1,197,634	-		MPMX19_01158	0.78	-1.8
1,197,844	+				-1.7
1,197,845	-				-1.1