Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01128

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,160,818	+				-0.6
1,160,819	-				-0.6
1,160,975	+		MPMX19_01127	0.23	-2.2
1,160,975	+		MPMX19_01127	0.23	-1.6
1,160,975	+		MPMX19_01127	0.23	+2.1
1,160,975	+		MPMX19_01127	0.23	-0.3
1,160,975	+		MPMX19_01127	0.23	-1.1
1,160,975	+		MPMX19_01127	0.23	-1.2
1,160,975	+		MPMX19_01127	0.23	-0.6
1,160,975	+		MPMX19_01127	0.23	-0.6
1,160,975	+		MPMX19_01127	0.23	-1.6
1,160,975	+		MPMX19_01127	0.23	+0.7
1,160,975	+		MPMX19_01127	0.23	+0.9
1,160,975	+		MPMX19_01127	0.23	+0.5
1,160,975	+		MPMX19_01127	0.23	-2.0
1,160,975	+		MPMX19_01127	0.23	+0.3
1,160,975	+		MPMX19_01127	0.23	+0.1
1,160,975	+		MPMX19_01127	0.23	+1.3
1,160,975	+		MPMX19_01127	0.23	-0.3
1,160,975	+		MPMX19_01127	0.23	-0.4
1,160,975	+		MPMX19_01127	0.23	+0.1
1,160,975	+		MPMX19_01127	0.23	-1.6
1,160,975	+		MPMX19_01127	0.23	+0.7
1,160,975	+		MPMX19_01127	0.23	+0.9
1,160,975	+		MPMX19_01127	0.23	+1.5
1,160,976	-		MPMX19_01127	0.23	-0.6
1,160,976	-		MPMX19_01127	0.23	-0.6
1,160,976	-		MPMX19_01127	0.23	-0.6
1,160,976	-		MPMX19_01127	0.23	+0.7
1,160,976	-		MPMX19_01127	0.23	-0.5
1,160,976	-		MPMX19_01127	0.23	-0.3
1,160,976	-		MPMX19_01127	0.23	-0.1
1,160,976	-		MPMX19_01127	0.23	-1.6
1,160,976	-		MPMX19_01127	0.23	-1.0
1,160,976	-		MPMX19_01127	0.23	-0.3
1,160,976	-		MPMX19_01127	0.23	-2.0
1,160,976	-		MPMX19_01127	0.23	-1.9
1,160,976	-		MPMX19_01127	0.23	-0.9
1,160,976	-		MPMX19_01127	0.23	-0.6
1,160,976	-		MPMX19_01127	0.23	-0.9
1,160,976	-		MPMX19_01127	0.23	-2.5
1,160,976	-		MPMX19_01127	0.23	-1.9
1,160,976	-		MPMX19_01127	0.23	-1.7
1,160,976	-		MPMX19_01127	0.23	+0.9
1,160,976	-		MPMX19_01127	0.23	-1.3
1,160,976	-		MPMX19_01127	0.23	-1.5
1,160,976	-		MPMX19_01127	0.23	-0.2
1,160,976	-		MPMX19_01127	0.23	-0.1
1,160,976	-		MPMX19_01127	0.23	-0.2
1,160,976	-		MPMX19_01127	0.23	-0.6
1,161,856	+		MPMX19_01128	0.74	-1.5
1,161,856	+		MPMX19_01128	0.74	-0.6
1,161,856	+		MPMX19_01128	0.74	-1.0
1,161,856	+		MPMX19_01128	0.74	+0.4
1,161,856	+		MPMX19_01128	0.74	-1.4
1,161,856	+		MPMX19_01128	0.74	-1.9
1,161,856	+		MPMX19_01128	0.74	-0.1
1,161,856	+		MPMX19_01128	0.74	-2.7
1,161,856	+		MPMX19_01128	0.74	+0.4
1,161,856	+		MPMX19_01128	0.74	+0.9
1,161,856	+		MPMX19_01128	0.74	+1.1
1,161,856	+		MPMX19_01128	0.74	-1.0
1,161,856	+		MPMX19_01128	0.74	-1.3
1,161,857	-		MPMX19_01128	0.74	-0.1
1,161,857	-		MPMX19_01128	0.74	-0.3
1,161,857	-		MPMX19_01128	0.74	+0.4
1,161,857	-		MPMX19_01128	0.74	+0.1
1,161,857	-		MPMX19_01128	0.74	-0.9
1,161,857	-		MPMX19_01128	0.74	-1.6
1,161,857	-		MPMX19_01128	0.74	+0.1
1,161,857	-		MPMX19_01128	0.74	+1.1
1,161,857	-		MPMX19_01128	0.74	-0.3
1,161,967	+				-0.6
1,161,967	+				-2.0
1,161,967	+				-0.9
1,161,967	+				-1.1
1,161,967	+				+2.3
1,161,967	+				-1.3
1,161,967	+				-0.3
1,161,967	+				-0.3
1,161,967	+				+0.3
1,161,967	+				-0.6
1,161,967	+				+0.1
1,161,968	-				-1.6
1,161,968	-				-1.3
1,161,968	-				-1.1
1,161,968	-				-1.0
1,161,968	-				-0.6
1,161,968	-				+0.5
1,161,968	-				-1.7
1,161,968	-				-1.0
1,161,997	+				-1.3
1,161,997	+				-0.6
1,161,997	+				+0.1
1,161,997	+				+0.7
1,161,998	-				+1.3
1,161,998	-				-1.1
1,162,016	+				-2.1
1,162,016	+				+0.7
1,162,017	-				-1.7
1,162,137	+				-0.3
1,162,137	+				+0.4
1,162,138	-				+0.1
1,162,138	-				+1.7
1,162,365	+		MPMX19_01129	0.16	-0.6
1,162,365	+		MPMX19_01129	0.16	+0.2
1,162,365	+		MPMX19_01129	0.16	-0.9
1,162,365	+		MPMX19_01129	0.16	-0.6
1,162,365	+		MPMX19_01129	0.16	+0.1
1,162,365	+		MPMX19_01129	0.16	-0.3
1,162,365	+		MPMX19_01129	0.16	+0.1
1,162,365	+		MPMX19_01129	0.16	+0.8
1,162,365	+		MPMX19_01129	0.16	-0.5
1,162,365	+		MPMX19_01129	0.16	+0.4
1,162,365	+		MPMX19_01129	0.16	-0.1
1,162,365	+		MPMX19_01129	0.16	+1.4
1,162,365	+		MPMX19_01129	0.16	-0.4
1,162,365	+		MPMX19_01129	0.16	-1.6
1,162,366	-		MPMX19_01129	0.16	-0.1
1,162,366	-		MPMX19_01129	0.16	+0.7
1,162,366	-		MPMX19_01129	0.16	-1.3
1,162,366	-		MPMX19_01129	0.16	+0.7
1,162,366	-		MPMX19_01129	0.16	-0.2
1,162,366	-		MPMX19_01129	0.16	+0.5
1,162,366	-		MPMX19_01129	0.16	+1.3
1,162,366	-		MPMX19_01129	0.16	-0.7
1,162,366	-		MPMX19_01129	0.16	-0.5
1,162,366	-		MPMX19_01129	0.16	+0.1
1,162,366	-		MPMX19_01129	0.16	+0.2
1,162,366	-		MPMX19_01129	0.16	+0.3
1,162,366	-		MPMX19_01129	0.16	-0.3
1,162,366	-		MPMX19_01129	0.16	-0.5
1,162,366	-		MPMX19_01129	0.16	-0.9
1,162,366	-		MPMX19_01129	0.16	+1.1
1,162,366	-		MPMX19_01129	0.16	+0.2
1,162,539	+		MPMX19_01129	0.27	-0.3
1,162,539	+		MPMX19_01129	0.27	-0.9
1,162,539	+		MPMX19_01129	0.27	-1.3
1,162,539	+		MPMX19_01129	0.27	-0.3
1,162,539	+		MPMX19_01129	0.27	-0.6
1,162,539	+		MPMX19_01129	0.27	+0.7
1,162,539	+		MPMX19_01129	0.27	-0.3
1,162,540	-		MPMX19_01129	0.27	-1.1
1,162,540	-		MPMX19_01129	0.27	-0.6
1,162,540	-		MPMX19_01129	0.27	-0.5
1,162,540	-		MPMX19_01129	0.27	-1.0
1,162,540	-		MPMX19_01129	0.27	-1.0
1,162,540	-		MPMX19_01129	0.27	-0.3
1,162,540	-		MPMX19_01129	0.27	+0.7
1,162,540	-		MPMX19_01129	0.27	+0.5
1,162,540	-		MPMX19_01129	0.27	+0.4
1,162,540	-		MPMX19_01129	0.27	-0.3
1,162,540	-		MPMX19_01129	0.27	+0.1
1,162,540	-		MPMX19_01129	0.27	+0.5
1,162,540	-		MPMX19_01129	0.27	-0.3
1,162,542	+		MPMX19_01129	0.27	+0.2
1,162,542	+		MPMX19_01129	0.27	-0.1
1,162,542	+		MPMX19_01129	0.27	-0.9
1,162,542	+		MPMX19_01129	0.27	-1.3
1,162,542	+		MPMX19_01129	0.27	-0.5
1,162,542	+		MPMX19_01129	0.27	-0.1
1,162,542	+		MPMX19_01129	0.27	+1.1
1,162,543	-		MPMX19_01129	0.27	-1.1
1,162,543	-		MPMX19_01129	0.27	-0.8
1,162,543	-		MPMX19_01129	0.27	+0.5
1,162,543	-		MPMX19_01129	0.27	-0.3
1,162,543	-		MPMX19_01129	0.27	-1.3
1,162,543	-		MPMX19_01129	0.27	-0.1
1,162,543	-		MPMX19_01129	0.27	-0.5
1,162,605	+		MPMX19_01129	0.30	+3.0
1,162,605	+		MPMX19_01129	0.30	-0.6
1,162,605	+		MPMX19_01129	0.30	-2.2
1,162,605	+		MPMX19_01129	0.30	-0.8
1,162,605	+		MPMX19_01129	0.30	-1.4
1,162,605	+		MPMX19_01129	0.30	-2.0
1,162,605	+		MPMX19_01129	0.30	-0.2
1,162,605	+		MPMX19_01129	0.30	+3.8
1,162,605	+		MPMX19_01129	0.30	+0.7
1,162,605	+		MPMX19_01129	0.30	-1.4
1,162,606	-		MPMX19_01129	0.31	-2.4
1,162,606	-		MPMX19_01129	0.31	-0.1
1,162,606	-		MPMX19_01129	0.31	-1.1
1,162,606	-		MPMX19_01129	0.31	-0.6
1,162,606	-		MPMX19_01129	0.31	-0.5
1,162,606	-		MPMX19_01129	0.31	-1.5
1,162,606	-		MPMX19_01129	0.31	-0.6
1,162,606	-		MPMX19_01129	0.31	+0.7
1,162,606	-		MPMX19_01129	0.31	-1.3
1,162,606	-		MPMX19_01129	0.31	-1.3
1,162,606	-		MPMX19_01129	0.31	-1.8
1,162,606	-		MPMX19_01129	0.31	-0.2
1,162,606	-		MPMX19_01129	0.31	-2.6
1,162,656	+		MPMX19_01129	0.33	-0.6
1,162,656	+		MPMX19_01129	0.33	-0.9
1,162,656	+		MPMX19_01129	0.33	+0.1
1,162,656	+		MPMX19_01129	0.33	+0.1
1,162,657	-		MPMX19_01129	0.34	+1.7
1,162,761	+		MPMX19_01129	0.40	-1.3
1,162,761	+		MPMX19_01129	0.40	-0.3
1,162,761	+		MPMX19_01129	0.40	-1.1
1,162,761	+		MPMX19_01129	0.40	-0.3
1,162,761	+		MPMX19_01129	0.40	+0.4
1,162,761	+		MPMX19_01129	0.40	+0.1
1,162,761	+		MPMX19_01129	0.40	-0.8
1,162,762	-		MPMX19_01129	0.40	+1.1
1,162,762	-		MPMX19_01129	0.40	-1.2
1,162,762	-		MPMX19_01129	0.40	-1.1
1,162,762	-		MPMX19_01129	0.40	-0.3
1,162,762	-		MPMX19_01129	0.40	-1.3
1,162,762	-		MPMX19_01129	0.40	-0.3
1,162,775	-		MPMX19_01129	0.40	-0.3
1,162,893	+		MPMX19_01129	0.47	+1.4
1,162,893	+		MPMX19_01129	0.47	+0.7
1,162,893	+		MPMX19_01129	0.47	-0.9
1,162,893	+		MPMX19_01129	0.47	+0.1
1,162,893	+		MPMX19_01129	0.47	+2.3
1,162,894	-		MPMX19_01129	0.47	-0.3
1,162,894	-		MPMX19_01129	0.47	-0.2
1,162,894	-		MPMX19_01129	0.47	-0.9
1,162,894	-		MPMX19_01129	0.47	-0.1
1,162,894	-		MPMX19_01129	0.47	-0.6
1,162,943	+		MPMX19_01129	0.50	-1.3
1,162,943	+		MPMX19_01129	0.50	-1.1
1,162,943	+		MPMX19_01129	0.50	-0.2
1,162,943	+		MPMX19_01129	0.50	+0.5
1,162,943	+		MPMX19_01129	0.50	+0.1
1,162,943	+		MPMX19_01129	0.50	+0.4
1,162,943	+		MPMX19_01129	0.50	-0.6
1,162,943	+		MPMX19_01129	0.50	-1.8
1,162,943	+		MPMX19_01129	0.50	+1.5
1,162,943	+		MPMX19_01129	0.50	+0.4
1,162,943	+		MPMX19_01129	0.50	-1.2
1,162,944	-		MPMX19_01129	0.50	+0.1
1,162,944	-		MPMX19_01129	0.50	-0.3
1,162,944	-		MPMX19_01129	0.50	-0.3
1,162,944	-		MPMX19_01129	0.50	-0.0
1,162,944	-		MPMX19_01129	0.50	-0.1
1,162,944	-		MPMX19_01129	0.50	-0.3
1,162,944	-		MPMX19_01129	0.50	-1.1
1,162,944	-		MPMX19_01129	0.50	-0.1
1,162,944	-		MPMX19_01129	0.50	+0.1