Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00347 and MPMX19_00348 are separated by 108 nucleotides MPMX19_00348 and MPMX19_00349 are separated by 218 nucleotides
MPMX19_00347: MPMX19_00347 - hypothetical protein, at 355,342 to 355,680
_00347
MPMX19_00348: MPMX19_00348 - Fructokinase, at 355,789 to 356,679
_00348
MPMX19_00349: MPMX19_00349 - hypothetical protein, at 356,898 to 359,345
_00349
Position (kb) 355
356
357 Strain fitness (log2 ratio) -2
-1
0
1
2 at 354.881 kb on + strand at 354.881 kb on + strand at 354.881 kb on + strand at 354.882 kb on - strand at 355.113 kb on + strand at 355.113 kb on + strand at 355.113 kb on + strand at 355.113 kb on + strand at 355.113 kb on + strand at 355.114 kb on - strand at 355.114 kb on - strand at 355.114 kb on - strand at 355.114 kb on - strand at 355.114 kb on - strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.115 kb on + strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.116 kb on - strand at 355.134 kb on + strand at 355.134 kb on + strand at 355.134 kb on + strand at 355.134 kb on + strand at 355.134 kb on + strand at 355.134 kb on + strand at 355.135 kb on - strand at 355.135 kb on - strand at 355.135 kb on - strand at 355.135 kb on - strand at 355.135 kb on - strand at 355.135 kb on - strand at 355.313 kb on + strand at 355.686 kb on + strand at 355.686 kb on + strand at 355.686 kb on + strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 355.687 kb on - strand at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.430 kb on + strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.431 kb on - strand, within MPMX19_00348 at 356.577 kb on - strand, within MPMX19_00348 at 356.705 kb on + strand at 356.705 kb on + strand at 356.705 kb on + strand at 356.705 kb on + strand at 356.705 kb on + strand at 356.706 kb on - strand at 356.706 kb on - strand at 356.706 kb on - strand at 356.706 kb on - strand at 356.706 kb on - strand at 356.706 kb on - strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.730 kb on + strand at 356.731 kb on + strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.731 kb on - strand at 356.732 kb on + strand at 356.732 kb on + strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.850 kb on + strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 356.851 kb on - strand at 357.471 kb on + strand, within MPMX19_00349 at 357.471 kb on + strand, within MPMX19_00349 at 357.471 kb on + strand, within MPMX19_00349 at 357.471 kb on + strand, within MPMX19_00349 at 357.471 kb on + strand, within MPMX19_00349 at 357.472 kb on - strand, within MPMX19_00349
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 354,881 + -1.2 354,881 + -1.9 354,881 + -1.9 354,882 - -1.5 355,113 + -1.5 355,113 + -0.4 355,113 + +0.6 355,113 + +0.3 355,113 + +2.2 355,114 - +0.3 355,114 - +0.2 355,114 - -2.2 355,114 - -0.4 355,114 - -1.5 355,115 + -0.4 355,115 + +0.6 355,115 + -1.2 355,115 + +1.2 355,115 + -1.4 355,115 + -1.2 355,115 + -1.3 355,115 + +0.1 355,115 + -0.7 355,115 + -0.7 355,115 + +1.2 355,115 + +0.5 355,115 + -0.6 355,115 + -0.7 355,115 + -0.6 355,115 + -0.7 355,116 - -2.1 355,116 - +0.5 355,116 - +0.6 355,116 - -0.9 355,116 - +0.2 355,116 - -0.7 355,116 - -0.2 355,116 - +0.6 355,116 - -1.4 355,116 - -0.9 355,116 - +0.3 355,116 - -0.9 355,116 - -1.5 355,116 - -1.4 355,116 - +0.6 355,116 - -0.4 355,116 - -0.2 355,116 - +0.6 355,116 - -0.7 355,134 + -1.2 355,134 + +0.1 355,134 + -1.7 355,134 + -1.5 355,134 + -2.2 355,134 + +0.6 355,135 - -0.9 355,135 - +0.6 355,135 - -2.5 355,135 - -0.7 355,135 - -2.3 355,135 - -1.2 355,313 + +1.3 355,686 + -0.9 355,686 + +1.1 355,686 + -0.2 355,687 - +1.2 355,687 - -0.5 355,687 - -0.7 355,687 - -0.4 355,687 - -1.2 355,687 - -0.4 355,687 - -1.4 355,687 - +0.6 356,430 + MPMX19_00348 0.72 -0.5 356,430 + MPMX19_00348 0.72 -0.2 356,430 + MPMX19_00348 0.72 -0.9 356,430 + MPMX19_00348 0.72 +1.6 356,430 + MPMX19_00348 0.72 +0.1 356,430 + MPMX19_00348 0.72 -1.8 356,430 + MPMX19_00348 0.72 -1.4 356,430 + MPMX19_00348 0.72 +0.1 356,430 + MPMX19_00348 0.72 -1.6 356,430 + MPMX19_00348 0.72 -0.7 356,430 + MPMX19_00348 0.72 -0.7 356,430 + MPMX19_00348 0.72 +0.3 356,430 + MPMX19_00348 0.72 -0.9 356,430 + MPMX19_00348 0.72 -0.4 356,430 + MPMX19_00348 0.72 -0.5 356,430 + MPMX19_00348 0.72 +0.6 356,430 + MPMX19_00348 0.72 +0.6 356,430 + MPMX19_00348 0.72 -0.7 356,430 + MPMX19_00348 0.72 -0.7 356,430 + MPMX19_00348 0.72 -0.4 356,430 + MPMX19_00348 0.72 -1.7 356,430 + MPMX19_00348 0.72 -0.3 356,430 + MPMX19_00348 0.72 -0.7 356,430 + MPMX19_00348 0.72 -0.4 356,430 + MPMX19_00348 0.72 -0.9 356,430 + MPMX19_00348 0.72 -1.4 356,430 + MPMX19_00348 0.72 +0.6 356,431 - MPMX19_00348 0.72 +0.6 356,431 - MPMX19_00348 0.72 -0.1 356,431 - MPMX19_00348 0.72 -2.1 356,431 - MPMX19_00348 0.72 -1.8 356,431 - MPMX19_00348 0.72 -0.9 356,431 - MPMX19_00348 0.72 -1.5 356,431 - MPMX19_00348 0.72 -0.9 356,431 - MPMX19_00348 0.72 +0.6 356,431 - MPMX19_00348 0.72 +0.1 356,431 - MPMX19_00348 0.72 +0.1 356,431 - MPMX19_00348 0.72 +0.1 356,431 - MPMX19_00348 0.72 -0.8 356,431 - MPMX19_00348 0.72 +0.3 356,431 - MPMX19_00348 0.72 +0.3 356,431 - MPMX19_00348 0.72 -1.7 356,431 - MPMX19_00348 0.72 -0.9 356,431 - MPMX19_00348 0.72 +0.1 356,431 - MPMX19_00348 0.72 -0.7 356,431 - MPMX19_00348 0.72 -1.2 356,431 - MPMX19_00348 0.72 +0.5 356,431 - MPMX19_00348 0.72 -0.6 356,431 - MPMX19_00348 0.72 -0.7 356,431 - MPMX19_00348 0.72 -0.4 356,431 - MPMX19_00348 0.72 -0.5 356,431 - MPMX19_00348 0.72 -1.6 356,431 - MPMX19_00348 0.72 +0.3 356,431 - MPMX19_00348 0.72 -1.5 356,431 - MPMX19_00348 0.72 -1.4 356,431 - MPMX19_00348 0.72 -0.7 356,431 - MPMX19_00348 0.72 -0.4 356,431 - MPMX19_00348 0.72 -2.2 356,431 - MPMX19_00348 0.72 -0.2 356,431 - MPMX19_00348 0.72 -1.2 356,431 - MPMX19_00348 0.72 -0.7 356,431 - MPMX19_00348 0.72 -0.7 356,431 - MPMX19_00348 0.72 -1.2 356,431 - MPMX19_00348 0.72 -0.9 356,431 - MPMX19_00348 0.72 -1.2 356,577 - MPMX19_00348 0.88 +0.1 356,705 + -0.4 356,705 + -1.2 356,705 + -0.9 356,705 + +0.1 356,705 + -0.9 356,706 - -1.2 356,706 - -1.4 356,706 - -1.4 356,706 - +1.6 356,706 - -0.4 356,706 - -0.4 356,730 + +1.1 356,730 + -0.7 356,730 + -0.1 356,730 + +0.1 356,730 + -2.1 356,730 + +1.6 356,730 + -2.1 356,730 + -0.9 356,730 + -1.3 356,730 + -1.4 356,730 + -1.5 356,730 + -0.7 356,730 + -1.2 356,730 + +0.6 356,730 + -1.2 356,731 + +0.3 356,731 - +2.2 356,731 - -1.1 356,731 - -0.7 356,731 - -1.2 356,731 - -1.5 356,731 - -0.4 356,731 - -0.9 356,731 - -0.4 356,731 - -0.5 356,731 - -0.7 356,731 - -0.9 356,731 - -0.1 356,731 - -0.7 356,731 - +0.1 356,731 - -0.9 356,731 - -0.9 356,731 - -0.4 356,731 - -1.5 356,732 + +0.1 356,732 + -1.2 356,733 - -1.2 356,733 - +0.1 356,733 - -1.4 356,733 - +0.1 356,733 - -0.7 356,733 - +0.1 356,850 + +0.3 356,850 + -0.4 356,850 + +0.1 356,850 + +0.6 356,850 + -0.4 356,850 + -0.7 356,850 + -0.9 356,850 + -1.2 356,851 - +0.6 356,851 - -0.4 356,851 - +1.1 356,851 - -0.4 356,851 - -1.5 356,851 - +0.3 356,851 - -0.5 356,851 - +0.3 356,851 - +0.6 356,851 - +0.5 356,851 - +1.2 357,471 + MPMX19_00349 0.23 +0.1 357,471 + MPMX19_00349 0.23 -0.9 357,471 + MPMX19_00349 0.23 +0.8 357,471 + MPMX19_00349 0.23 +1.3 357,471 + MPMX19_00349 0.23 -2.1 357,472 - MPMX19_00349 0.23 -0.9
Or see this region's nucleotide sequence