Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05947

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
91,573	+		MPMX19_05946	0.36	+1.0
91,573	+		MPMX19_05946	0.36	+0.3
91,573	+		MPMX19_05946	0.36	-1.4
91,573	+		MPMX19_05946	0.36	-1.2
91,573	+		MPMX19_05946	0.36	-0.4
91,574	-		MPMX19_05946	0.36	-0.4
91,574	-		MPMX19_05946	0.36	+0.6
91,574	-		MPMX19_05946	0.36	-1.0
91,574	-		MPMX19_05946	0.36	-1.4
91,574	-		MPMX19_05946	0.36	-0.7
91,574	-		MPMX19_05946	0.36	-0.2
91,574	-		MPMX19_05946	0.36	-0.2
91,574	-		MPMX19_05946	0.36	+0.6
91,918	+		MPMX19_05946	0.77	+2.6
91,918	+		MPMX19_05946	0.77	-1.7
91,918	+		MPMX19_05946	0.77	-0.0
91,918	+		MPMX19_05946	0.77	+0.6
91,918	+		MPMX19_05946	0.77	+0.6
91,918	+		MPMX19_05946	0.77	+1.6
91,918	+		MPMX19_05946	0.77	-1.9
91,918	+		MPMX19_05946	0.77	-0.6
91,918	+		MPMX19_05946	0.77	-1.2
91,918	+		MPMX19_05946	0.77	-0.3
91,918	+		MPMX19_05946	0.77	-1.2
91,918	+		MPMX19_05946	0.77	-0.4
91,918	+		MPMX19_05946	0.77	+1.6
91,918	+		MPMX19_05946	0.77	-0.2
91,918	+		MPMX19_05946	0.77	+0.2
91,918	+		MPMX19_05946	0.77	-0.0
91,918	+		MPMX19_05946	0.77	+1.6
91,918	+		MPMX19_05946	0.77	-0.6
91,918	+		MPMX19_05946	0.77	+1.0
91,918	+		MPMX19_05946	0.77	-1.2
91,918	+		MPMX19_05946	0.77	+1.6
91,919	-		MPMX19_05946	0.77	-1.3
91,919	-		MPMX19_05946	0.77	+0.8
91,919	-		MPMX19_05946	0.77	-0.1
91,919	-		MPMX19_05946	0.77	+0.6
91,919	-		MPMX19_05946	0.77	-0.7
91,919	-		MPMX19_05946	0.77	-0.7
91,919	-		MPMX19_05946	0.77	-0.7
91,919	-		MPMX19_05946	0.77	-0.0
91,919	-		MPMX19_05946	0.77	-0.7
91,919	-		MPMX19_05946	0.77	-1.1
91,919	-		MPMX19_05946	0.77	-0.4
91,919	-		MPMX19_05946	0.77	-0.0
91,919	-		MPMX19_05946	0.77	-2.0
91,919	-		MPMX19_05946	0.77	-1.4
91,919	-		MPMX19_05946	0.77	-0.5
91,919	-		MPMX19_05946	0.77	-1.2
91,919	-		MPMX19_05946	0.77	-2.0
91,919	-		MPMX19_05946	0.77	+1.0
91,948	+		MPMX19_05946	0.80	-2.5
91,948	+		MPMX19_05946	0.80	+0.3
91,948	+		MPMX19_05946	0.80	-2.1
91,949	-		MPMX19_05946	0.81	-0.0
91,949	-		MPMX19_05946	0.81	-0.5
91,949	-		MPMX19_05946	0.81	-0.7
92,167	+				+0.6
92,167	+				-2.7
92,167	+				-0.6
92,167	+				-2.1
92,167	+				+0.6
92,167	+				+1.0
92,167	+				-1.3
92,167	+				-3.3
92,167	+				-0.0
92,167	+				-1.1
92,167	+				-2.9
92,167	+				-0.0
92,167	+				-0.4
92,167	+				-0.0
92,167	+				-0.1
92,167	-				+0.8
92,168	-				-0.7
92,168	-				+0.4
92,168	-				+0.6
92,168	-				-1.9
92,168	-				-0.2
92,168	-				-0.7
92,168	-				-2.2
92,168	-				-0.0
92,168	-				+1.0
92,168	-				-0.0
92,168	-				-0.4
92,168	-				-0.7
92,168	-				-1.3
92,168	-				-1.0
92,168	-				-0.1
92,168	-				+0.6
92,168	-				+1.6
92,265	+		MPMX19_05947	0.10	-0.2
92,265	+		MPMX19_05947	0.10	+1.0
92,319	+		MPMX19_05947	0.16	-1.0
92,505	+		MPMX19_05947	0.37	-1.2
92,505	+		MPMX19_05947	0.37	+0.3
92,505	+		MPMX19_05947	0.37	+1.0
92,505	+		MPMX19_05947	0.37	-1.6
92,505	+		MPMX19_05947	0.37	-1.9
92,505	+		MPMX19_05947	0.37	+0.3
92,505	+		MPMX19_05947	0.37	+0.3
92,505	+		MPMX19_05947	0.37	+0.8
92,505	+		MPMX19_05947	0.37	-0.5
92,505	+		MPMX19_05947	0.37	-0.6
92,505	+		MPMX19_05947	0.37	-1.7
92,505	+		MPMX19_05947	0.37	-1.2
92,506	-		MPMX19_05947	0.37	-1.6
92,506	-		MPMX19_05947	0.37	-1.2
92,506	-		MPMX19_05947	0.37	-0.4
92,506	-		MPMX19_05947	0.37	-0.1
92,506	-		MPMX19_05947	0.37	-1.7
92,506	-		MPMX19_05947	0.37	+1.0
92,506	-		MPMX19_05947	0.37	-2.3
92,506	-		MPMX19_05947	0.37	+0.6
92,506	-		MPMX19_05947	0.37	-2.0
92,553	+		MPMX19_05947	0.42	+0.6
92,553	+		MPMX19_05947	0.42	-0.0
92,553	+		MPMX19_05947	0.42	-0.0
92,553	+		MPMX19_05947	0.42	-0.6
92,553	+		MPMX19_05947	0.42	-0.4
92,554	-		MPMX19_05947	0.42	-0.1
92,554	-		MPMX19_05947	0.42	-0.9
92,554	-		MPMX19_05947	0.42	-0.7
92,554	-		MPMX19_05947	0.42	-0.4
92,554	-		MPMX19_05947	0.42	+2.4
92,554	-		MPMX19_05947	0.42	-0.2
92,554	-		MPMX19_05947	0.42	-0.4
92,554	-		MPMX19_05947	0.42	-2.0
92,577	+		MPMX19_05947	0.44	-1.3
92,577	+		MPMX19_05947	0.44	-2.4
92,619	+		MPMX19_05947	0.49	-1.1
92,619	+		MPMX19_05947	0.49	+0.6
92,619	+		MPMX19_05947	0.49	-0.2
92,619	+		MPMX19_05947	0.49	+0.3
92,620	-		MPMX19_05947	0.49	-0.4
92,620	-		MPMX19_05947	0.49	-0.0
93,008	+				-1.6
93,009	-				-2.1
93,009	-				-0.4
93,009	-				-0.0
93,070	+				+1.8
93,091	+				-0.0
93,091	+				-0.3
93,108	+				+1.0
93,108	+				-0.0
93,108	+				-0.4
93,108	+				-0.0
93,108	+				-0.4
93,109	-				-0.4
93,109	-				-1.0
93,132	+				-1.2
93,132	+				+1.0
93,132	+				-0.7
93,132	+				+1.6
93,132	+				-0.7
93,132	+				+0.2
93,132	+				+0.2
93,132	+				+2.0
93,133	-				-1.3
93,133	-				-0.0
93,133	-				+0.5
93,133	-				-0.6
93,133	-				+2.2
93,141	+				-1.4
93,141	+				-0.2
93,581	-		MPMX19_05948	0.64	-1.0
93,581	-		MPMX19_05948	0.64	-0.4
93,581	-		MPMX19_05948	0.64	-0.2
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-2.0
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	-1.2
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.0
93,694	+		MPMX19_05948	0.88	-3.9
93,694	+		MPMX19_05948	0.88	+1.2
93,694	+		MPMX19_05948	0.88	-1.0
93,694	+		MPMX19_05948	0.88	+0.6
93,694	+		MPMX19_05948	0.88	-1.0
93,694	+		MPMX19_05948	0.88	+1.6
93,694	+		MPMX19_05948	0.88	-2.9
93,694	+		MPMX19_05948	0.88	-1.5
93,694	+		MPMX19_05948	0.88	-0.3
93,694	+		MPMX19_05948	0.88	+0.6
93,694	+		MPMX19_05948	0.88	-0.0
93,694	+		MPMX19_05948	0.88	-0.6
93,694	+		MPMX19_05948	0.88	-1.2
93,694	+		MPMX19_05948	0.88	-2.2
93,694	+		MPMX19_05948	0.88	-1.6
93,694	+		MPMX19_05948	0.88	-1.2
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	+0.6
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	+1.2
93,694	+		MPMX19_05948	0.88	-1.4
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.0
93,694	+		MPMX19_05948	0.88	-0.3
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	-0.2
93,694	+		MPMX19_05948	0.88	-0.7
93,695	-		MPMX19_05948	0.89	-1.6
93,695	-		MPMX19_05948	0.89	-0.2
93,695	-		MPMX19_05948	0.89	+0.8
93,695	-		MPMX19_05948	0.89	-1.2
93,695	-		MPMX19_05948	0.89	-1.6
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.8
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.7
93,695	-		MPMX19_05948	0.89	-1.0
93,695	-		MPMX19_05948	0.89	-0.9
93,695	-		MPMX19_05948	0.89	-0.0
93,695	-		MPMX19_05948	0.89	-1.6
93,695	-		MPMX19_05948	0.89	-1.9
93,695	-		MPMX19_05948	0.89	+0.3
93,695	-		MPMX19_05948	0.89	+1.0
93,695	-		MPMX19_05948	0.89	-0.0
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	+0.6
93,695	-		MPMX19_05948	0.89	-0.2
93,695	-		MPMX19_05948	0.89	+0.4
93,695	-		MPMX19_05948	0.89	-0.6
93,695	-		MPMX19_05948	0.89	-1.2
93,695	-		MPMX19_05948	0.89	+0.0
93,695	-		MPMX19_05948	0.89	-1.2
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.0
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	-1.2
93,695	-		MPMX19_05948	0.89	+0.6
93,695	-		MPMX19_05948	0.89	-0.0
93,695	-		MPMX19_05948	0.89	-1.4
93,695	-		MPMX19_05948	0.89	-0.6