Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04663

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
49,018	+		MPMX19_04662	0.26	-1.4
49,018	+		MPMX19_04662	0.26	-1.3
49,018	+		MPMX19_04662	0.26	-1.2
49,018	+		MPMX19_04662	0.26	-0.8
49,018	+		MPMX19_04662	0.26	-0.0
49,018	+		MPMX19_04662	0.26	-0.8
49,019	-		MPMX19_04662	0.26	-0.4
49,019	-		MPMX19_04662	0.26	-0.6
49,019	-		MPMX19_04662	0.26	+1.0
49,019	-		MPMX19_04662	0.26	-1.5
49,019	-		MPMX19_04662	0.26	+1.7
49,019	-		MPMX19_04662	0.26	-0.4
49,087	+		MPMX19_04662	0.34	-0.1
49,087	+		MPMX19_04662	0.34	-0.0
49,087	+		MPMX19_04662	0.34	-0.1
49,087	+		MPMX19_04662	0.34	-0.8
49,087	+		MPMX19_04662	0.34	+0.4
49,087	+		MPMX19_04662	0.34	-0.3
49,087	+		MPMX19_04662	0.34	-1.0
49,087	+		MPMX19_04662	0.34	+0.2
49,088	-		MPMX19_04662	0.34	-0.6
49,088	-		MPMX19_04662	0.34	-0.9
49,088	-		MPMX19_04662	0.34	-1.1
49,088	-		MPMX19_04662	0.34	-0.3
49,088	-		MPMX19_04662	0.34	-0.6
49,088	-		MPMX19_04662	0.34	-0.3
49,088	-		MPMX19_04662	0.34	-1.3
49,237	+		MPMX19_04662	0.51	+1.2
49,237	+		MPMX19_04662	0.51	-1.3
49,238	-		MPMX19_04662	0.51	+0.4
49,238	-		MPMX19_04662	0.51	+0.2
49,238	-		MPMX19_04662	0.51	-0.1
49,280	-		MPMX19_04662	0.56	-1.7
49,280	-		MPMX19_04662	0.56	-0.3
49,280	-		MPMX19_04662	0.56	-1.0
49,280	-		MPMX19_04662	0.56	+0.2
49,424	-		MPMX19_04662	0.73	-0.3
49,468	+		MPMX19_04662	0.78	+0.2
49,468	+		MPMX19_04662	0.78	-0.4
49,468	+		MPMX19_04662	0.78	+0.5
49,468	+		MPMX19_04662	0.78	-0.8
49,567	+		MPMX19_04662	0.89	-1.1
49,567	+		MPMX19_04662	0.89	-1.1
49,567	+		MPMX19_04662	0.89	+0.2
49,567	+		MPMX19_04662	0.89	+1.0
49,568	-		MPMX19_04662	0.89	+1.7
49,568	-		MPMX19_04662	0.89	-0.7
49,600	+				-0.2
49,600	+				-0.8
49,600	+				+0.2
49,600	+				-0.6
49,601	-				-1.2
49,601	-				+1.2
49,601	-				-0.3
49,601	-				+0.2
49,601	-				-0.5
49,657	+				-0.8
49,657	+				-0.6
49,657	+				-0.8
49,657	+				+1.7
49,657	+				+1.2
49,657	+				-1.3
49,657	+				-0.6
49,657	+				+1.0
49,657	+				+0.2
49,657	+				+0.7
49,657	+				-0.4
49,657	+				-1.1
49,657	+				-0.1
49,657	+				-0.4
49,657	+				+0.5
49,657	+				-1.0
49,657	+				+0.2
49,657	+				-2.8
49,657	+				-0.7
49,658	-				-1.3
49,658	-				-0.8
49,658	-				-1.0
49,658	-				-0.6
49,658	-				+0.7
49,658	-				-0.8
49,658	-				-0.3
49,658	-				+2.2
49,658	-				+1.7
49,658	-				-1.4
49,658	-				+1.7
49,658	-				-1.1
49,658	-				-1.3
49,658	-				-1.3
49,658	-				+0.4
49,658	-				-0.3
49,658	-				+0.2
49,658	-				-0.8
49,658	-				-1.5
49,912	+		MPMX19_04663	0.11	+0.3
49,912	+		MPMX19_04663	0.11	-1.3
49,912	+		MPMX19_04663	0.11	-0.6
49,912	+		MPMX19_04663	0.11	+0.5
49,912	+		MPMX19_04663	0.11	+0.9
49,912	+		MPMX19_04663	0.11	-1.8
49,913	-		MPMX19_04663	0.12	-1.1
49,913	-		MPMX19_04663	0.12	-0.8
50,013	+		MPMX19_04663	0.20	-0.3
50,013	+		MPMX19_04663	0.20	-2.5
50,014	-		MPMX19_04663	0.20	-1.4
50,014	-		MPMX19_04663	0.20	+2.5
50,014	-		MPMX19_04663	0.20	+0.7
50,014	-		MPMX19_04663	0.20	-1.1
50,031	+		MPMX19_04663	0.21	-1.4
50,031	+		MPMX19_04663	0.21	+0.2
50,032	-		MPMX19_04663	0.21	+0.3
50,032	-		MPMX19_04663	0.21	-0.7
50,032	-		MPMX19_04663	0.21	+1.2
50,032	-		MPMX19_04663	0.21	-1.2
50,190	+		MPMX19_04663	0.34	-0.6
50,190	+		MPMX19_04663	0.34	-0.8
50,190	+		MPMX19_04663	0.34	-0.3
50,190	+		MPMX19_04663	0.34	+1.4
50,190	+		MPMX19_04663	0.34	-0.3
50,190	+		MPMX19_04663	0.34	-2.4
50,190	+		MPMX19_04663	0.34	-2.2
50,190	+		MPMX19_04663	0.34	-1.0
50,190	+		MPMX19_04663	0.34	+0.2
50,191	-		MPMX19_04663	0.34	-0.2
50,191	-		MPMX19_04663	0.34	-0.3
50,191	-		MPMX19_04663	0.34	+0.2
50,191	-		MPMX19_04663	0.34	+0.2
50,191	-		MPMX19_04663	0.34	-1.4
50,191	-		MPMX19_04663	0.34	-0.1
50,191	-		MPMX19_04663	0.34	-2.6
50,191	-		MPMX19_04663	0.34	-0.1
50,253	+		MPMX19_04663	0.39	+0.2
50,254	-		MPMX19_04663	0.39	-0.4
50,256	+		MPMX19_04663	0.39	-0.1
50,256	+		MPMX19_04663	0.39	-0.1
50,256	+		MPMX19_04663	0.39	-1.7
50,256	+		MPMX19_04663	0.39	-0.6
50,256	+		MPMX19_04663	0.39	-2.4
50,256	+		MPMX19_04663	0.39	+0.4
50,257	-		MPMX19_04663	0.39	-1.1
50,257	-		MPMX19_04663	0.39	-0.9
50,257	-		MPMX19_04663	0.39	-1.3
50,257	-		MPMX19_04663	0.39	-0.5
50,257	-		MPMX19_04663	0.39	-1.1
50,257	-		MPMX19_04663	0.39	+0.2
50,257	-		MPMX19_04663	0.39	+1.0
50,257	-		MPMX19_04663	0.39	-0.3
50,257	-		MPMX19_04663	0.39	+0.3
50,589	+		MPMX19_04663	0.66	-0.3
50,589	+		MPMX19_04663	0.66	-0.0
50,590	-		MPMX19_04663	0.66	+0.2
50,590	-		MPMX19_04663	0.66	-0.3
50,601	+		MPMX19_04663	0.67	-0.0
51,014	-				-0.4
51,209	+		MPMX19_04664	0.21	+0.2
51,209	+		MPMX19_04664	0.21	-1.3
51,209	+		MPMX19_04664	0.21	-1.4
51,209	+		MPMX19_04664	0.21	+0.2
51,266	+		MPMX19_04664	0.28	-0.8
51,267	-		MPMX19_04664	0.28	+1.7
51,267	-		MPMX19_04664	0.28	-0.6
51,267	-		MPMX19_04664	0.28	-0.0
51,267	-		MPMX19_04664	0.28	+2.2
51,267	-		MPMX19_04664	0.28	-0.3
51,437	+		MPMX19_04664	0.47	+0.9
51,438	-		MPMX19_04664	0.47	-0.3
51,438	-		MPMX19_04664	0.47	+0.4
51,438	-		MPMX19_04664	0.47	-0.6
51,438	-		MPMX19_04664	0.47	-1.8
51,476	+		MPMX19_04664	0.52	+0.9
51,476	+		MPMX19_04664	0.52	-0.3
51,476	+		MPMX19_04664	0.52	+1.2
51,477	-		MPMX19_04664	0.52	-0.6
51,477	-		MPMX19_04664	0.52	-0.6
51,696	+		MPMX19_04664	0.76	+1.4
51,863	+				+1.0
51,863	+				+0.4
51,863	+				+0.0
51,863	+				-0.1
51,863	+				-1.5
51,863	+				+0.4
51,863	+				-0.1
51,863	+				-0.6
51,863	+				+0.4
51,863	+				+0.2
51,863	+				-0.4
51,863	+				-0.1
51,863	+				-1.6
51,864	-				-1.3
51,864	-				-1.3
51,864	-				-2.1
51,864	-				-1.1
51,864	-				-0.5
51,864	-				-1.7
51,864	-				-0.3
51,864	-				-0.3
51,864	-				-0.5
51,980	-				+0.2
51,988	+				-0.8
51,992	-				-1.1