Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03740

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,181,504	+		MPMX19_03737	0.75	-0.9
1,181,504	+		MPMX19_03737	0.75	-0.3
1,181,504	+		MPMX19_03737	0.75	-0.1
1,181,504	+		MPMX19_03737	0.75	-2.0
1,181,505	-		MPMX19_03737	0.75	-0.8
1,181,505	-		MPMX19_03737	0.75	-0.9
1,181,505	-		MPMX19_03737	0.75	-1.3
1,181,505	-		MPMX19_03737	0.75	-1.1
1,181,505	-		MPMX19_03737	0.75	-0.3
1,181,505	-		MPMX19_03737	0.75	+2.3
1,181,505	-		MPMX19_03737	0.75	-1.1
1,181,505	-		MPMX19_03737	0.75	-0.9
1,181,618	+		MPMX19_03737	0.88	+0.3
1,181,618	+		MPMX19_03737	0.88	-0.3
1,181,618	+		MPMX19_03737	0.88	+4.0
1,181,618	+		MPMX19_03737	0.88	+0.5
1,181,618	+		MPMX19_03737	0.88	-1.1
1,181,619	-		MPMX19_03737	0.88	-0.9
1,181,734	+				-1.1
1,181,734	+				+1.7
1,181,734	+				+0.4
1,181,734	+				+1.1
1,181,734	+				+0.2
1,181,735	-				-0.4
1,181,735	-				+0.7
1,181,735	-				-0.3
1,181,778	+				-0.6
1,181,778	+				-0.3
1,181,778	+				+0.4
1,181,778	+				+1.7
1,181,778	+				+0.1
1,181,779	-				-1.1
1,181,779	-				-1.3
1,181,779	-				-1.3
1,181,779	-				-0.5
1,181,960	+		MPMX19_03738	0.38	-1.6
1,181,960	+		MPMX19_03738	0.38	-0.3
1,181,960	+		MPMX19_03738	0.38	-1.6
1,181,960	+		MPMX19_03738	0.38	-1.1
1,181,960	+		MPMX19_03738	0.38	-0.6
1,181,960	+		MPMX19_03738	0.38	-1.6
1,181,960	+		MPMX19_03738	0.38	+0.3
1,181,960	+		MPMX19_03738	0.38	-1.0
1,181,960	+		MPMX19_03738	0.38	+0.5
1,181,960	-		MPMX19_03738	0.38	-1.5
1,181,961	-		MPMX19_03738	0.38	+0.7
1,181,961	-		MPMX19_03738	0.38	-2.9
1,181,961	-		MPMX19_03738	0.38	+0.4
1,181,961	-		MPMX19_03738	0.38	-0.6
1,181,961	-		MPMX19_03738	0.38	-0.5
1,181,961	-		MPMX19_03738	0.38	-1.3
1,181,961	-		MPMX19_03738	0.38	+0.5
1,182,380	+		MPMX19_03739	0.85	+0.7
1,182,380	+		MPMX19_03739	0.85	-0.3
1,182,380	+		MPMX19_03739	0.85	-1.4
1,182,380	+		MPMX19_03739	0.85	-0.5
1,182,380	+		MPMX19_03739	0.85	-1.4
1,182,381	-		MPMX19_03739	0.86	-0.3
1,182,381	-		MPMX19_03739	0.86	+0.1
1,182,381	-		MPMX19_03739	0.86	-1.1
1,182,381	-		MPMX19_03739	0.86	-0.6
1,182,381	-		MPMX19_03739	0.86	-1.0
1,182,381	-		MPMX19_03739	0.86	-0.3
1,182,381	-		MPMX19_03739	0.86	+2.3
1,182,381	-		MPMX19_03739	0.86	-1.3
1,182,557	+				+1.1
1,182,558	-				-2.3
1,182,891	+		MPMX19_03740	0.30	-1.1
1,182,891	+		MPMX19_03740	0.30	-1.3
1,182,891	+		MPMX19_03740	0.30	-2.3
1,182,891	+		MPMX19_03740	0.30	+0.1
1,182,891	+		MPMX19_03740	0.30	+0.7
1,182,891	+		MPMX19_03740	0.30	-0.9
1,182,942	+		MPMX19_03740	0.33	-0.6
1,182,942	+		MPMX19_03740	0.33	-0.3
1,182,943	-		MPMX19_03740	0.34	+1.3
1,182,943	-		MPMX19_03740	0.34	-0.5
1,182,943	-		MPMX19_03740	0.34	-2.5
1,182,943	-		MPMX19_03740	0.34	-1.1
1,182,943	-		MPMX19_03740	0.34	-2.4
1,183,032	+		MPMX19_03740	0.39	-0.9
1,183,032	+		MPMX19_03740	0.39	-0.9
1,183,032	+		MPMX19_03740	0.39	+0.1
1,183,032	+		MPMX19_03740	0.39	-2.9
1,183,032	+		MPMX19_03740	0.39	-0.9
1,183,033	-		MPMX19_03740	0.39	-0.9
1,183,146	+		MPMX19_03740	0.46	-0.8
1,183,146	+		MPMX19_03740	0.46	-2.1
1,183,147	-		MPMX19_03740	0.47	-2.6
1,183,147	-		MPMX19_03740	0.47	+1.3
1,183,147	-		MPMX19_03740	0.47	-1.0
1,183,147	-		MPMX19_03740	0.47	+0.3
1,183,254	+		MPMX19_03740	0.53	-0.3
1,183,254	+		MPMX19_03740	0.53	+0.1
1,183,254	+		MPMX19_03740	0.53	+0.7
1,183,255	-		MPMX19_03740	0.53	-0.3
1,183,255	-		MPMX19_03740	0.53	-1.4
1,183,255	-		MPMX19_03740	0.53	-0.8
1,183,255	-		MPMX19_03740	0.53	-1.3
1,183,275	+		MPMX19_03740	0.55	-0.3
1,183,275	+		MPMX19_03740	0.55	-0.8
1,183,275	+		MPMX19_03740	0.55	-0.1
1,183,275	+		MPMX19_03740	0.55	-1.6
1,183,276	-		MPMX19_03740	0.55	-0.6
1,183,276	-		MPMX19_03740	0.55	-0.5
1,183,276	-		MPMX19_03740	0.55	-0.8
1,183,276	-		MPMX19_03740	0.55	-0.3
1,183,276	-		MPMX19_03740	0.55	-0.8
1,183,299	+		MPMX19_03740	0.56	-2.6
1,183,299	+		MPMX19_03740	0.56	+2.7
1,183,299	+		MPMX19_03740	0.56	-0.3
1,183,299	+		MPMX19_03740	0.56	-1.5
1,183,299	+		MPMX19_03740	0.56	+0.7
1,183,299	+		MPMX19_03740	0.56	-0.5
1,183,300	-		MPMX19_03740	0.56	+0.4
1,183,300	-		MPMX19_03740	0.56	+0.1
1,183,300	-		MPMX19_03740	0.56	-0.8
1,183,540	-		MPMX19_03740	0.72	-0.0
1,183,572	+		MPMX19_03740	0.74	+1.1
1,183,572	+		MPMX19_03740	0.74	-0.6
1,183,573	-		MPMX19_03740	0.74	-0.6
1,183,573	-		MPMX19_03740	0.74	-0.5
1,183,573	-		MPMX19_03740	0.74	+0.1
1,183,573	-		MPMX19_03740	0.74	-0.3
1,183,585	-		MPMX19_03740	0.74	+0.7
1,183,585	-		MPMX19_03740	0.74	+0.7
1,183,593	+		MPMX19_03740	0.75	-1.1
1,183,593	+		MPMX19_03740	0.75	-0.6
1,183,593	+		MPMX19_03740	0.75	-1.3
1,183,593	+		MPMX19_03740	0.75	-2.7
1,183,593	+		MPMX19_03740	0.75	-1.8
1,183,593	+		MPMX19_03740	0.75	-0.3
1,183,593	+		MPMX19_03740	0.75	-1.9
1,183,593	+		MPMX19_03740	0.75	-3.6
1,183,593	+		MPMX19_03740	0.75	-0.9
1,183,593	+		MPMX19_03740	0.75	-0.3
1,183,593	+		MPMX19_03740	0.75	-2.0
1,183,593	+		MPMX19_03740	0.75	+0.9
1,183,593	+		MPMX19_03740	0.75	+0.1
1,183,594	-		MPMX19_03740	0.75	+0.1
1,183,594	-		MPMX19_03740	0.75	-1.0
1,183,594	-		MPMX19_03740	0.75	+0.8
1,183,594	-		MPMX19_03740	0.75	-1.3
1,183,594	-		MPMX19_03740	0.75	-0.9
1,183,594	-		MPMX19_03740	0.75	-0.4
1,183,722	+		MPMX19_03740	0.83	-0.5
1,183,722	+		MPMX19_03740	0.83	-0.9
1,183,722	+		MPMX19_03740	0.83	-0.3
1,183,722	+		MPMX19_03740	0.83	-0.9
1,183,722	+		MPMX19_03740	0.83	-0.3
1,183,722	+		MPMX19_03740	0.83	-0.9
1,183,722	+		MPMX19_03740	0.83	+0.1
1,183,722	+		MPMX19_03740	0.83	-2.3
1,183,723	-		MPMX19_03740	0.83	-0.6
1,183,723	-		MPMX19_03740	0.83	-0.1
1,183,723	-		MPMX19_03740	0.83	-2.3
1,183,723	-		MPMX19_03740	0.83	-0.1
1,183,723	-		MPMX19_03740	0.83	-0.2
1,183,723	-		MPMX19_03740	0.83	-1.5
1,183,723	-		MPMX19_03740	0.83	-0.3
1,183,723	-		MPMX19_03740	0.83	-1.0
1,183,723	-		MPMX19_03740	0.83	-1.1
1,183,723	-		MPMX19_03740	0.83	+0.4
1,183,723	-		MPMX19_03740	0.83	+1.1
1,183,723	-		MPMX19_03740	0.83	+0.1
1,183,723	-		MPMX19_03740	0.83	+0.7
1,183,723	-		MPMX19_03740	0.83	-2.4
1,183,859	+				+0.1
1,183,860	-				-0.3
1,184,213	+		MPMX19_03741	0.70	+0.5
1,184,213	+		MPMX19_03741	0.70	-1.1
1,184,213	+		MPMX19_03741	0.70	+1.1
1,184,214	-		MPMX19_03741	0.70	-0.3
1,184,214	-		MPMX19_03741	0.70	-0.3
1,184,214	-		MPMX19_03741	0.70	-0.1
1,184,501	+				-0.6
1,184,501	+				+0.7
1,184,502	-				+0.4
1,184,502	-				+0.1
1,184,686	+		MPMX19_03742	0.18	-1.1
1,184,687	-		MPMX19_03742	0.18	-0.9
1,184,687	-		MPMX19_03742	0.18	-0.3
1,184,712	+		MPMX19_03742	0.23	-0.3
1,184,712	+		MPMX19_03742	0.23	-2.7
1,184,712	+		MPMX19_03742	0.23	-1.1
1,184,712	+		MPMX19_03742	0.23	-0.6
1,184,712	+		MPMX19_03742	0.23	+0.9
1,184,712	+		MPMX19_03742	0.23	-0.1
1,184,712	+		MPMX19_03742	0.23	+4.0
1,184,712	+		MPMX19_03742	0.23	+1.7
1,184,712	+		MPMX19_03742	0.23	+0.4
1,184,713	-		MPMX19_03742	0.23	-0.6
1,184,713	-		MPMX19_03742	0.23	+0.1
1,184,713	-		MPMX19_03742	0.23	-0.8
1,184,713	-		MPMX19_03742	0.23	-1.0
1,184,713	-		MPMX19_03742	0.23	+0.4
1,184,713	-		MPMX19_03742	0.23	+0.4
1,184,713	-		MPMX19_03742	0.23	-1.1
1,184,713	-		MPMX19_03742	0.23	-1.1
1,184,714	+		MPMX19_03742	0.23	+0.1
1,184,715	-		MPMX19_03742	0.23	+2.3
1,184,775	+		MPMX19_03742	0.33	-1.3
1,184,775	+		MPMX19_03742	0.33	-1.4
1,184,776	-		MPMX19_03742	0.33	-0.3
1,184,776	-		MPMX19_03742	0.33	-0.7
1,184,776	-		MPMX19_03742	0.33	+1.1
1,184,930	+		MPMX19_03742	0.59	-0.6
1,184,930	+		MPMX19_03742	0.59	+0.4
1,184,930	+		MPMX19_03742	0.59	+0.4
1,184,930	+		MPMX19_03742	0.59	-0.5
1,184,930	+		MPMX19_03742	0.59	+0.3
1,184,930	+		MPMX19_03742	0.59	+0.7
1,184,930	+		MPMX19_03742	0.59	-0.6
1,184,930	+		MPMX19_03742	0.59	+0.1
1,184,930	+		MPMX19_03742	0.59	-1.0
1,184,930	+		MPMX19_03742	0.59	-1.1
1,184,930	+		MPMX19_03742	0.59	+0.7
1,184,930	+		MPMX19_03742	0.59	-0.9
1,184,930	+		MPMX19_03742	0.59	-1.1
1,184,930	+		MPMX19_03742	0.59	-0.6
1,184,930	+		MPMX19_03742	0.59	-1.3
1,184,930	+		MPMX19_03742	0.59	-1.1
1,184,931	-		MPMX19_03742	0.59	-1.9
1,184,931	-		MPMX19_03742	0.59	-0.6
1,184,931	-		MPMX19_03742	0.59	-1.3
1,184,931	-		MPMX19_03742	0.59	+0.9
1,184,931	-		MPMX19_03742	0.59	-0.6
1,184,931	-		MPMX19_03742	0.59	-1.8
1,184,931	-		MPMX19_03742	0.59	-0.6
1,184,931	-		MPMX19_03742	0.59	-1.5
1,184,931	-		MPMX19_03742	0.59	-0.9
1,184,931	-		MPMX19_03742	0.59	+0.4
1,184,931	-		MPMX19_03742	0.59	-1.5
1,184,931	-		MPMX19_03742	0.59	-2.1