Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03581

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,002,621	+		MPMX19_03580	0.40	-0.9
1,002,621	+		MPMX19_03580	0.40	-1.1
1,002,622	-		MPMX19_03580	0.40	+0.9
1,002,622	-		MPMX19_03580	0.40	-1.8
1,002,660	+		MPMX19_03580	0.42	-0.3
1,002,660	+		MPMX19_03580	0.42	+1.4
1,002,660	+		MPMX19_03580	0.42	+0.4
1,002,660	+		MPMX19_03580	0.42	-1.6
1,002,660	+		MPMX19_03580	0.42	-2.4
1,002,660	+		MPMX19_03580	0.42	+0.1
1,002,660	+		MPMX19_03580	0.42	+0.1
1,002,660	+		MPMX19_03580	0.42	-0.5
1,002,660	+		MPMX19_03580	0.42	-0.9
1,002,660	+		MPMX19_03580	0.42	-0.5
1,002,660	+		MPMX19_03580	0.42	-2.5
1,002,660	+		MPMX19_03580	0.42	-1.5
1,002,660	+		MPMX19_03580	0.42	-0.3
1,002,660	+		MPMX19_03580	0.42	-0.5
1,002,661	-		MPMX19_03580	0.43	-1.0
1,002,661	-		MPMX19_03580	0.43	-1.1
1,002,661	-		MPMX19_03580	0.43	+0.5
1,002,661	-		MPMX19_03580	0.43	-0.3
1,002,661	-		MPMX19_03580	0.43	+0.7
1,002,661	-		MPMX19_03580	0.43	-0.6
1,002,661	-		MPMX19_03580	0.43	-0.6
1,002,661	-		MPMX19_03580	0.43	-0.5
1,002,661	-		MPMX19_03580	0.43	+1.7
1,002,661	-		MPMX19_03580	0.43	-0.2
1,002,661	-		MPMX19_03580	0.43	-1.4
1,002,661	-		MPMX19_03580	0.43	-0.6
1,002,661	-		MPMX19_03580	0.43	-0.3
1,002,661	-		MPMX19_03580	0.43	-0.9
1,002,876	+		MPMX19_03580	0.57	-2.1
1,002,877	-		MPMX19_03580	0.57	-0.3
1,002,877	-		MPMX19_03580	0.57	-0.9
1,003,207	-		MPMX19_03580	0.79	+1.7
1,003,338	+		MPMX19_03580	0.88	-0.5
1,003,338	+		MPMX19_03580	0.88	+1.1
1,003,338	+		MPMX19_03580	0.88	-0.1
1,003,338	+		MPMX19_03580	0.88	-0.9
1,003,338	+		MPMX19_03580	0.88	+0.4
1,003,338	+		MPMX19_03580	0.88	+0.7
1,003,338	+		MPMX19_03580	0.88	-0.3
1,003,338	+		MPMX19_03580	0.88	-0.5
1,003,338	+		MPMX19_03580	0.88	-0.3
1,003,338	+		MPMX19_03580	0.88	-0.6
1,003,338	+		MPMX19_03580	0.88	+0.3
1,003,338	+		MPMX19_03580	0.88	+1.4
1,003,339	-		MPMX19_03580	0.88	-0.1
1,003,339	-		MPMX19_03580	0.88	+0.1
1,003,339	-		MPMX19_03580	0.88	-0.9
1,003,339	-		MPMX19_03580	0.88	-0.3
1,003,339	-		MPMX19_03580	0.88	-1.8
1,003,339	-		MPMX19_03580	0.88	-1.5
1,003,339	-		MPMX19_03580	0.88	-1.5
1,003,339	-		MPMX19_03580	0.88	-2.0
1,003,339	-		MPMX19_03580	0.88	+1.1
1,003,339	-		MPMX19_03580	0.88	-0.2
1,003,339	-		MPMX19_03580	0.88	+2.4
1,003,339	-		MPMX19_03580	0.88	-2.3
1,003,339	-		MPMX19_03580	0.88	+0.5
1,003,339	-		MPMX19_03580	0.88	-0.9
1,003,339	-		MPMX19_03580	0.88	-1.5
1,003,339	-		MPMX19_03580	0.88	-1.6
1,003,339	-		MPMX19_03580	0.88	-0.3
1,003,339	-		MPMX19_03580	0.88	+0.4
1,003,339	-		MPMX19_03580	0.88	-1.1
1,003,339	-		MPMX19_03580	0.88	-1.3
1,003,430	+				+1.3
1,003,430	+				-0.1
1,003,430	+				-0.8
1,003,430	+				-0.3
1,003,430	+				-0.9
1,003,430	+				-1.5
1,003,431	-				+1.1
1,003,431	-				-1.0
1,003,431	-				-0.8
1,003,431	-				-1.6
1,003,431	-				+0.8
1,003,431	-				+1.5
1,003,431	-				-1.3
1,003,431	-				+0.3
1,003,431	-				+0.7
1,003,531	+				-0.6
1,003,532	-				-0.8
1,003,532	-				-3.1
1,003,596	+				-0.9
1,003,820	+				-0.3
1,003,820	+				-0.5
1,003,820	+				-0.6
1,003,820	+				-2.1
1,003,820	+				-0.9
1,003,820	+				-0.1
1,003,820	+				+0.1
1,003,820	+				-1.6
1,003,820	+				+0.7
1,003,820	+				-1.0
1,003,820	+				-1.1
1,003,820	+				-0.3
1,003,820	+				+1.1
1,003,820	+				-1.5
1,003,820	+				+0.7
1,003,820	+				-0.5
1,003,820	+				-0.1
1,003,820	+				+0.1
1,003,820	+				-0.9
1,003,820	+				-1.1
1,003,820	+				-0.1
1,003,820	+				-0.3
1,003,820	+				+0.7
1,003,820	+				-0.6
1,003,820	+				-0.6
1,003,820	+				-0.3
1,003,820	+				+0.4
1,003,820	+				+0.9
1,003,820	+				+0.7
1,003,820	+				+0.0
1,003,820	+				-0.2
1,003,820	+				+1.1
1,003,820	+				-0.6
1,003,820	+				-0.2
1,003,821	-				+0.3
1,003,821	-				+0.4
1,003,821	-				+0.3
1,003,821	-				-2.1
1,003,821	-				-1.5
1,003,821	-				+0.3
1,003,821	-				+0.9
1,003,821	-				-0.5
1,003,821	-				+0.9
1,003,821	-				-1.6
1,003,821	-				-0.3
1,003,821	-				-0.3
1,003,821	-				+0.5
1,003,821	-				-3.0
1,003,821	-				-1.3
1,003,821	-				+0.7
1,003,821	-				-0.6
1,003,821	-				-1.3
1,003,821	-				-1.1
1,003,821	-				-0.6
1,003,821	-				-0.7
1,003,821	-				-1.5
1,003,821	-				-1.8
1,003,821	-				+0.7
1,003,821	-				-0.3
1,003,821	-				-1.5
1,003,821	-				-0.3
1,003,821	-				+0.3
1,003,821	-				+0.7
1,004,173	+		MPMX19_03581	0.21	-0.9
1,004,173	+		MPMX19_03581	0.21	-1.1
1,004,173	+		MPMX19_03581	0.21	-0.5
1,004,173	+		MPMX19_03581	0.21	-2.0
1,004,173	+		MPMX19_03581	0.21	-2.1
1,004,174	-		MPMX19_03581	0.21	+0.2
1,004,174	-		MPMX19_03581	0.21	-0.7
1,004,174	-		MPMX19_03581	0.21	-0.0
1,004,174	-		MPMX19_03581	0.21	-0.9
1,004,174	-		MPMX19_03581	0.21	+1.1
1,004,174	-		MPMX19_03581	0.21	-0.6
1,004,174	-		MPMX19_03581	0.21	-1.0
1,004,174	-		MPMX19_03581	0.21	+0.4
1,004,174	-		MPMX19_03581	0.21	-0.9
1,004,174	-		MPMX19_03581	0.21	-1.0
1,004,174	-		MPMX19_03581	0.21	-0.4
1,004,174	-		MPMX19_03581	0.21	-1.5
1,004,174	-		MPMX19_03581	0.21	+0.6
1,004,273	+		MPMX19_03581	0.25	-1.6
1,004,273	+		MPMX19_03581	0.25	-1.8
1,004,273	+		MPMX19_03581	0.25	-0.9
1,004,273	+		MPMX19_03581	0.25	+0.2
1,004,273	+		MPMX19_03581	0.25	+0.7
1,004,274	-		MPMX19_03581	0.25	-1.5
1,004,274	-		MPMX19_03581	0.25	-0.5
1,004,274	-		MPMX19_03581	0.25	-0.6
1,004,274	-		MPMX19_03581	0.25	-2.2
1,004,396	+		MPMX19_03581	0.30	-1.6
1,004,396	+		MPMX19_03581	0.30	-0.6
1,004,396	+		MPMX19_03581	0.30	+0.1
1,004,397	-		MPMX19_03581	0.30	-1.8
1,004,397	-		MPMX19_03581	0.30	-2.0
1,004,397	-		MPMX19_03581	0.30	-2.2
1,004,397	-		MPMX19_03581	0.30	-1.1
1,004,519	+		MPMX19_03581	0.34	-2.6
1,004,519	+		MPMX19_03581	0.34	-1.6
1,004,520	-		MPMX19_03581	0.34	-0.4
1,004,520	-		MPMX19_03581	0.34	-1.3
1,004,520	-		MPMX19_03581	0.34	-1.0
1,004,520	-		MPMX19_03581	0.34	-1.1
1,004,803	-		MPMX19_03581	0.45	-1.3
1,004,906	+		MPMX19_03581	0.49	-1.1
1,004,906	+		MPMX19_03581	0.49	+0.7
1,004,906	+		MPMX19_03581	0.49	+0.7
1,004,906	+		MPMX19_03581	0.49	-0.4
1,004,906	+		MPMX19_03581	0.49	-0.3
1,004,907	-		MPMX19_03581	0.49	-2.2
1,004,907	-		MPMX19_03581	0.49	+0.1
1,004,907	-		MPMX19_03581	0.49	-0.3
1,004,940	-		MPMX19_03581	0.50	-1.5
1,005,054	-		MPMX19_03581	0.55	+1.2
1,005,077	+		MPMX19_03581	0.56	-0.5
1,005,077	+		MPMX19_03581	0.56	+0.1
1,005,077	+		MPMX19_03581	0.56	+0.7
1,005,078	-		MPMX19_03581	0.56	-1.5
1,005,078	-		MPMX19_03581	0.56	-0.6
1,005,078	-		MPMX19_03581	0.56	-0.9
1,005,078	-		MPMX19_03581	0.56	-3.1
1,005,338	+		MPMX19_03581	0.66	+1.3
1,005,338	+		MPMX19_03581	0.66	-1.5
1,005,338	+		MPMX19_03581	0.66	+0.5
1,005,338	+		MPMX19_03581	0.66	-0.6
1,005,338	+		MPMX19_03581	0.66	-1.3
1,005,338	+		MPMX19_03581	0.66	-0.9
1,005,338	+		MPMX19_03581	0.66	-0.9
1,005,338	+		MPMX19_03581	0.66	-1.1
1,005,339	-		MPMX19_03581	0.66	-2.4
1,005,339	-		MPMX19_03581	0.66	-1.4
1,005,339	-		MPMX19_03581	0.66	+0.3
1,005,339	-		MPMX19_03581	0.66	-0.7
1,005,339	-		MPMX19_03581	0.66	+0.4
1,005,339	-		MPMX19_03581	0.66	+0.7
1,005,339	-		MPMX19_03581	0.66	-0.6
1,005,339	-		MPMX19_03581	0.66	+0.4
1,005,339	-		MPMX19_03581	0.66	-1.9
1,005,339	-		MPMX19_03581	0.66	-0.6
1,005,339	-		MPMX19_03581	0.66	-1.3
1,005,506	+		MPMX19_03581	0.72	-0.5
1,005,506	+		MPMX19_03581	0.72	-1.5
1,005,506	+		MPMX19_03581	0.72	-1.9
1,005,506	+		MPMX19_03581	0.72	+0.8
1,005,506	+		MPMX19_03581	0.72	-1.8
1,005,506	+		MPMX19_03581	0.72	-1.5
1,005,506	+		MPMX19_03581	0.72	-0.3
1,005,507	-		MPMX19_03581	0.72	-0.3
1,005,507	-		MPMX19_03581	0.72	-2.4
1,005,507	-		MPMX19_03581	0.72	-1.3
1,005,704	+		MPMX19_03581	0.79	+0.3
1,005,704	+		MPMX19_03581	0.79	-0.7
1,005,704	+		MPMX19_03581	0.79	-0.6
1,005,704	+		MPMX19_03581	0.79	-0.9
1,005,704	+		MPMX19_03581	0.79	-0.5
1,005,704	+		MPMX19_03581	0.79	-1.5
1,005,704	+		MPMX19_03581	0.79	-2.4
1,005,704	+		MPMX19_03581	0.79	-0.3
1,005,704	+		MPMX19_03581	0.79	-2.2
1,005,705	-		MPMX19_03581	0.79	-2.3
1,005,705	-		MPMX19_03581	0.79	+0.7
1,005,705	-		MPMX19_03581	0.79	+1.7
1,005,705	-		MPMX19_03581	0.79	-0.9
1,005,705	-		MPMX19_03581	0.79	-0.8
1,005,705	-		MPMX19_03581	0.79	-0.1
1,005,705	-		MPMX19_03581	0.79	-1.5
1,005,705	-		MPMX19_03581	0.79	-0.9
1,005,815	+		MPMX19_03581	0.84	-0.6
1,005,816	-		MPMX19_03581	0.84	-0.3
1,005,816	-		MPMX19_03581	0.84	-0.6
1,005,965	+		MPMX19_03581	0.89	-0.6
1,005,965	+		MPMX19_03581	0.89	-0.3
1,005,965	+		MPMX19_03581	0.89	-0.6
1,005,966	-		MPMX19_03581	0.89	-2.1
1,005,966	-		MPMX19_03581	0.89	-0.6
1,005,966	-		MPMX19_03581	0.89	-0.3
1,005,966	-		MPMX19_03581	0.89	-1.1
1,006,254	+				+0.1
1,006,313	+				+0.5
1,006,314	-				-0.6
1,006,342	+				-1.5
1,006,342	+				-0.6
1,006,342	+				-1.0
1,006,342	+				-1.5
1,006,342	+				-1.0
1,006,342	+				-1.1
1,006,342	+				-0.6
1,006,342	+				-0.6
1,006,342	+				-2.1
1,006,342	+				-1.6
1,006,342	+				+0.5
1,006,343	-				+0.1
1,006,343	-				-0.8
1,006,343	-				-1.3
1,006,343	-				+1.0
1,006,343	-				-0.9
1,006,343	-				-0.3
1,006,343	-				-1.2
1,006,343	-				-0.1
1,006,343	-				-1.9
1,006,343	-				+0.6
1,006,343	-				-0.3
1,006,343	-				-1.8
1,006,343	-				+0.7
1,006,343	-				-0.3
1,006,343	-				+1.3
1,006,346	+				-2.3
1,006,346	+				-1.8
1,006,346	+				-1.3
1,006,346	+				+2.3
1,006,347	-				-1.1
1,006,347	-				-1.2
1,006,347	-				-0.9
1,006,503	-		MPMX19_03582	0.32	-0.3
1,006,503	-		MPMX19_03582	0.32	-2.4
1,006,503	-		MPMX19_03582	0.32	-0.2
1,006,605	+		MPMX19_03582	0.59	-0.3
1,006,605	+		MPMX19_03582	0.59	+0.1
1,006,605	+		MPMX19_03582	0.59	-1.3
1,006,605	+		MPMX19_03582	0.59	-0.6
1,006,605	+		MPMX19_03582	0.59	-1.8
1,006,605	+		MPMX19_03582	0.59	-1.5
1,006,605	+		MPMX19_03582	0.59	-2.8
1,006,606	-		MPMX19_03582	0.59	-1.3
1,006,606	-		MPMX19_03582	0.59	-2.0
1,006,606	-		MPMX19_03582	0.59	-0.3
1,006,606	-		MPMX19_03582	0.59	+0.1
1,006,606	-		MPMX19_03582	0.59	-1.1
1,006,606	-		MPMX19_03582	0.59	-0.8
1,006,606	-		MPMX19_03582	0.59	-0.6
1,006,606	-		MPMX19_03582	0.59	-1.3
1,006,739	-				+0.4
1,006,739	-				-0.9
1,006,813	+				-0.9
1,006,814	-				-0.5
1,006,824	+				+0.1
1,006,848	+				-1.9
1,006,848	+				+1.7
1,006,848	+				-0.9
1,006,848	+				-1.1
1,006,857	+				-1.1
1,006,857	+				+0.7
1,006,857	+				-0.4
1,006,857	+				-0.1
1,006,857	+				-1.1
1,006,857	+				-0.6
1,006,857	+				-0.3
1,006,857	+				+0.6
1,006,857	+				-0.9
1,006,857	+				-1.9
1,006,857	+				+1.7
1,006,857	+				-1.8
1,006,857	+				-3.8
1,006,857	+				-0.8
1,006,857	+				-0.9
1,006,857	+				-1.4
1,006,857	+				+0.4
1,006,858	-				-0.6
1,006,858	-				-0.2
1,006,858	-				+0.4
1,006,858	-				-0.3
1,006,858	-				-1.3
1,006,858	-				-1.1
1,006,858	-				+0.7
1,006,858	-				-1.3
1,006,858	-				-1.1
1,006,858	-				-0.7
1,006,858	-				+0.5
1,006,858	-				-0.3
1,006,863	+				+0.9
1,006,863	+				-1.5
1,006,863	+				-1.9
1,006,863	+				-1.5
1,006,864	-				-0.9
1,006,864	-				-1.3
1,006,911	-				-1.5