Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02813 and MPMX19_02814 overlap by 4 nucleotides MPMX19_02814 and MPMX19_02815 are separated by 70 nucleotides MPMX19_02815 and MPMX19_02816 are separated by 14 nucleotides
MPMX19_02813: MPMX19_02813 - hypothetical protein, at 49,274 to 50,689
_02813
MPMX19_02814: MPMX19_02814 - hypothetical protein, at 50,686 to 51,957
_02814
MPMX19_02815: MPMX19_02815 - 2-keto-4-pentenoate hydratase, at 52,028 to 52,792
_02815
MPMX19_02816: MPMX19_02816 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 52,807 to 53,493
_02816
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.812 kb on - strand, within MPMX19_02813 at 49.812 kb on - strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.926 kb on - strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.159 kb on + strand, within MPMX19_02813 at 50.294 kb on + strand, within MPMX19_02813 at 50.294 kb on + strand, within MPMX19_02813 at 50.294 kb on + strand, within MPMX19_02813 at 50.294 kb on + strand, within MPMX19_02813 at 50.295 kb on - strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.546 kb on + strand, within MPMX19_02813 at 50.547 kb on - strand, within MPMX19_02813 at 50.547 kb on - strand, within MPMX19_02813 at 50.564 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.582 kb on + strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.583 kb on - strand at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.828 kb on - strand, within MPMX19_02814 at 50.944 kb on + strand, within MPMX19_02814 at 50.944 kb on + strand, within MPMX19_02814 at 50.944 kb on + strand, within MPMX19_02814 at 50.945 kb on - strand, within MPMX19_02814 at 50.945 kb on - strand, within MPMX19_02814 at 50.945 kb on - strand, within MPMX19_02814 at 51.070 kb on + strand, within MPMX19_02814 at 51.070 kb on + strand, within MPMX19_02814 at 51.071 kb on - strand, within MPMX19_02814 at 51.071 kb on - strand, within MPMX19_02814 at 51.071 kb on - strand, within MPMX19_02814 at 51.071 kb on - strand, within MPMX19_02814 at 51.071 kb on - strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.375 kb on + strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.376 kb on - strand, within MPMX19_02814 at 51.418 kb on + strand, within MPMX19_02814 at 51.418 kb on + strand, within MPMX19_02814 at 51.419 kb on - strand, within MPMX19_02814 at 51.419 kb on - strand, within MPMX19_02814 at 51.446 kb on - strand, within MPMX19_02814 at 51.613 kb on + strand, within MPMX19_02814 at 51.613 kb on + strand, within MPMX19_02814 at 51.613 kb on + strand, within MPMX19_02814 at 51.613 kb on + strand, within MPMX19_02814 at 51.613 kb on + strand, within MPMX19_02814 at 51.614 kb on - strand, within MPMX19_02814 at 51.614 kb on - strand, within MPMX19_02814 at 51.614 kb on - strand, within MPMX19_02814 at 51.797 kb on - strand, within MPMX19_02814 at 51.797 kb on - strand, within MPMX19_02814 at 51.797 kb on - strand, within MPMX19_02814 at 51.844 kb on + strand at 51.845 kb on - strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.895 kb on + strand at 51.896 kb on - strand at 51.896 kb on - strand at 51.896 kb on - strand at 51.896 kb on - strand at 51.916 kb on + strand at 51.916 kb on + strand at 51.916 kb on + strand at 51.916 kb on + strand at 51.916 kb on + strand at 51.916 kb on + strand at 51.917 kb on - strand at 51.917 kb on - strand at 52.149 kb on - strand, within MPMX19_02815 at 52.328 kb on + strand, within MPMX19_02815 at 52.329 kb on - strand, within MPMX19_02815 at 52.329 kb on - strand, within MPMX19_02815 at 52.329 kb on - strand, within MPMX19_02815 at 52.446 kb on - strand, within MPMX19_02815
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 49,691 + MPMX19_02813 0.29 -0.1 49,691 + MPMX19_02813 0.29 -0.3 49,691 + MPMX19_02813 0.29 -0.9 49,691 + MPMX19_02813 0.29 -0.6 49,691 + MPMX19_02813 0.29 +0.4 49,691 + MPMX19_02813 0.29 -0.9 49,691 + MPMX19_02813 0.29 +1.7 49,692 - MPMX19_02813 0.30 -2.2 49,692 - MPMX19_02813 0.30 -1.0 49,692 - MPMX19_02813 0.30 -0.8 49,692 - MPMX19_02813 0.30 +0.5 49,692 - MPMX19_02813 0.30 +0.2 49,692 - MPMX19_02813 0.30 -0.1 49,692 - MPMX19_02813 0.30 -0.7 49,692 - MPMX19_02813 0.30 -0.7 49,692 - MPMX19_02813 0.30 -1.1 49,692 - MPMX19_02813 0.30 -0.5 49,778 + MPMX19_02813 0.36 +0.1 49,778 + MPMX19_02813 0.36 +0.7 49,778 + MPMX19_02813 0.36 -0.3 49,778 + MPMX19_02813 0.36 +0.3 49,778 + MPMX19_02813 0.36 +2.7 49,778 + MPMX19_02813 0.36 +1.7 49,778 + MPMX19_02813 0.36 +0.3 49,778 + MPMX19_02813 0.36 -0.7 49,778 + MPMX19_02813 0.36 -0.7 49,778 + MPMX19_02813 0.36 +0.7 49,778 + MPMX19_02813 0.36 -0.3 49,779 - MPMX19_02813 0.36 +0.2 49,779 - MPMX19_02813 0.36 -1.3 49,779 - MPMX19_02813 0.36 -0.7 49,779 - MPMX19_02813 0.36 +0.2 49,779 - MPMX19_02813 0.36 -0.9 49,779 - MPMX19_02813 0.36 -0.9 49,779 - MPMX19_02813 0.36 -0.1 49,779 - MPMX19_02813 0.36 -0.3 49,781 + MPMX19_02813 0.36 -0.9 49,781 + MPMX19_02813 0.36 -0.8 49,781 + MPMX19_02813 0.36 +0.3 49,781 + MPMX19_02813 0.36 -2.0 49,781 + MPMX19_02813 0.36 +0.2 49,781 + MPMX19_02813 0.36 -0.7 49,781 + MPMX19_02813 0.36 -1.9 49,781 + MPMX19_02813 0.36 -0.3 49,781 + MPMX19_02813 0.36 -2.3 49,781 + MPMX19_02813 0.36 -1.9 49,781 + MPMX19_02813 0.36 +0.4 49,781 + MPMX19_02813 0.36 -1.1 49,782 - MPMX19_02813 0.36 -0.6 49,782 - MPMX19_02813 0.36 +0.4 49,782 - MPMX19_02813 0.36 +1.1 49,782 - MPMX19_02813 0.36 -1.8 49,782 - MPMX19_02813 0.36 -2.1 49,782 - MPMX19_02813 0.36 +0.4 49,782 - MPMX19_02813 0.36 +1.0 49,782 - MPMX19_02813 0.36 -1.3 49,782 - MPMX19_02813 0.36 -0.3 49,782 - MPMX19_02813 0.36 -1.0 49,811 + MPMX19_02813 0.38 -1.5 49,811 + MPMX19_02813 0.38 -0.9 49,811 + MPMX19_02813 0.38 -1.8 49,811 + MPMX19_02813 0.38 -2.1 49,811 + MPMX19_02813 0.38 -2.0 49,812 - MPMX19_02813 0.38 -0.9 49,812 - MPMX19_02813 0.38 -2.7 49,925 + MPMX19_02813 0.46 -0.3 49,925 + MPMX19_02813 0.46 -1.3 49,925 + MPMX19_02813 0.46 -0.7 49,925 + MPMX19_02813 0.46 -0.7 49,925 + MPMX19_02813 0.46 -0.6 49,926 - MPMX19_02813 0.46 -0.1 50,069 + MPMX19_02813 0.56 -0.3 50,069 + MPMX19_02813 0.56 +0.3 50,069 + MPMX19_02813 0.56 +0.1 50,069 + MPMX19_02813 0.56 +0.2 50,069 + MPMX19_02813 0.56 -1.4 50,069 + MPMX19_02813 0.56 +0.1 50,069 + MPMX19_02813 0.56 +0.7 50,069 + MPMX19_02813 0.56 -1.8 50,069 + MPMX19_02813 0.56 -1.3 50,069 + MPMX19_02813 0.56 -1.8 50,070 - MPMX19_02813 0.56 -0.1 50,070 - MPMX19_02813 0.56 -0.3 50,070 - MPMX19_02813 0.56 -2.7 50,070 - MPMX19_02813 0.56 -0.5 50,070 - MPMX19_02813 0.56 -1.3 50,132 + MPMX19_02813 0.61 +0.1 50,132 + MPMX19_02813 0.61 -0.7 50,132 + MPMX19_02813 0.61 +1.4 50,132 + MPMX19_02813 0.61 -1.2 50,132 + MPMX19_02813 0.61 +0.2 50,133 - MPMX19_02813 0.61 -1.9 50,133 - MPMX19_02813 0.61 -0.1 50,133 - MPMX19_02813 0.61 +1.2 50,133 - MPMX19_02813 0.61 +0.7 50,133 - MPMX19_02813 0.61 -0.2 50,133 - MPMX19_02813 0.61 -1.0 50,159 + MPMX19_02813 0.62 +2.1 50,294 + MPMX19_02813 0.72 +0.3 50,294 + MPMX19_02813 0.72 +0.7 50,294 + MPMX19_02813 0.72 -1.5 50,294 + MPMX19_02813 0.72 -1.7 50,295 - MPMX19_02813 0.72 +0.3 50,546 + MPMX19_02813 0.90 -0.3 50,546 + MPMX19_02813 0.90 -2.7 50,546 + MPMX19_02813 0.90 -1.1 50,546 + MPMX19_02813 0.90 -1.8 50,546 + MPMX19_02813 0.90 +0.5 50,546 + MPMX19_02813 0.90 -1.9 50,547 - MPMX19_02813 0.90 -1.3 50,547 - MPMX19_02813 0.90 -1.1 50,564 + -1.5 50,582 + +0.7 50,582 + -0.8 50,582 + +0.7 50,582 + -0.3 50,582 + -0.4 50,582 + -1.5 50,582 + -0.9 50,582 + +0.3 50,582 + -1.5 50,582 + -1.7 50,582 + +1.7 50,582 + -0.5 50,582 + -1.8 50,582 + -1.7 50,582 + +0.1 50,582 + -1.3 50,583 - +0.1 50,583 - -0.9 50,583 - -0.6 50,583 - +0.3 50,583 - +1.0 50,583 - -0.9 50,583 - +0.7 50,583 - -0.2 50,583 - -1.5 50,583 - -1.5 50,583 - -0.2 50,583 - -0.5 50,583 - -1.3 50,583 - -0.9 50,583 - +0.1 50,583 - -1.1 50,583 - -1.3 50,828 - MPMX19_02814 0.11 -0.9 50,828 - MPMX19_02814 0.11 -0.3 50,828 - MPMX19_02814 0.11 +1.7 50,828 - MPMX19_02814 0.11 -1.7 50,828 - MPMX19_02814 0.11 -0.3 50,828 - MPMX19_02814 0.11 -0.5 50,828 - MPMX19_02814 0.11 -0.7 50,828 - MPMX19_02814 0.11 -0.3 50,828 - MPMX19_02814 0.11 +0.1 50,944 + MPMX19_02814 0.20 +0.9 50,944 + MPMX19_02814 0.20 -1.1 50,944 + MPMX19_02814 0.20 -1.3 50,945 - MPMX19_02814 0.20 -0.6 50,945 - MPMX19_02814 0.20 +1.2 50,945 - MPMX19_02814 0.20 -1.1 51,070 + MPMX19_02814 0.30 -0.4 51,070 + MPMX19_02814 0.30 -0.1 51,071 - MPMX19_02814 0.30 +0.1 51,071 - MPMX19_02814 0.30 +1.7 51,071 - MPMX19_02814 0.30 +1.7 51,071 - MPMX19_02814 0.30 +0.1 51,071 - MPMX19_02814 0.30 -0.7 51,375 + MPMX19_02814 0.54 -1.9 51,375 + MPMX19_02814 0.54 -1.7 51,375 + MPMX19_02814 0.54 -0.9 51,375 + MPMX19_02814 0.54 +0.4 51,375 + MPMX19_02814 0.54 -1.4 51,375 + MPMX19_02814 0.54 -1.3 51,375 + MPMX19_02814 0.54 -2.6 51,375 + MPMX19_02814 0.54 -1.5 51,375 + MPMX19_02814 0.54 -1.3 51,375 + MPMX19_02814 0.54 -1.3 51,376 - MPMX19_02814 0.54 +1.0 51,376 - MPMX19_02814 0.54 -0.5 51,376 - MPMX19_02814 0.54 +1.7 51,376 - MPMX19_02814 0.54 -0.3 51,376 - MPMX19_02814 0.54 -0.3 51,376 - MPMX19_02814 0.54 +1.7 51,376 - MPMX19_02814 0.54 -1.3 51,376 - MPMX19_02814 0.54 +1.1 51,376 - MPMX19_02814 0.54 -0.7 51,376 - MPMX19_02814 0.54 -0.7 51,376 - MPMX19_02814 0.54 +1.7 51,376 - MPMX19_02814 0.54 +0.1 51,376 - MPMX19_02814 0.54 -0.3 51,376 - MPMX19_02814 0.54 -1.1 51,418 + MPMX19_02814 0.58 -1.4 51,418 + MPMX19_02814 0.58 +0.1 51,419 - MPMX19_02814 0.58 +2.2 51,419 - MPMX19_02814 0.58 -0.3 51,446 - MPMX19_02814 0.60 -0.9 51,613 + MPMX19_02814 0.73 +0.4 51,613 + MPMX19_02814 0.73 +0.3 51,613 + MPMX19_02814 0.73 -0.3 51,613 + MPMX19_02814 0.73 -0.2 51,613 + MPMX19_02814 0.73 -2.5 51,614 - MPMX19_02814 0.73 -1.1 51,614 - MPMX19_02814 0.73 +0.7 51,614 - MPMX19_02814 0.73 +0.1 51,797 - MPMX19_02814 0.87 -0.5 51,797 - MPMX19_02814 0.87 -0.7 51,797 - MPMX19_02814 0.87 -1.3 51,844 + -0.7 51,845 - -1.3 51,895 + -0.7 51,895 + +0.1 51,895 + -0.3 51,895 + -0.9 51,895 + -0.8 51,895 + -1.1 51,895 + -0.1 51,896 - +0.3 51,896 - +1.9 51,896 - -0.7 51,896 - -0.3 51,916 + -0.7 51,916 + -0.4 51,916 + +2.0 51,916 + -1.1 51,916 + -1.3 51,916 + +0.1 51,917 - -1.3 51,917 - -1.5 52,149 - MPMX19_02815 0.16 -0.7 52,328 + MPMX19_02815 0.39 -1.8 52,329 - MPMX19_02815 0.39 +0.1 52,329 - MPMX19_02815 0.39 -0.9 52,329 - MPMX19_02815 0.39 -0.7 52,446 - MPMX19_02815 0.55 +0.3
Or see this region's nucleotide sequence