Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02521

Experiment: NF_with10percent_fullN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02520 and MPMX19_02521 are separated by 74 nucleotidesMPMX19_02521 and MPMX19_02522 are separated by 21 nucleotides MPMX19_02520: MPMX19_02520 - Transcription termination/antitermination protein NusA, at 2,637,976 to 2,639,547 _02520 MPMX19_02521: MPMX19_02521 - hypothetical protein, at 2,639,622 to 2,640,422 _02521 MPMX19_02522: MPMX19_02522 - Translation initiation factor IF-2, at 2,640,444 to 2,643,329 _02522 Position (kb) 2639 2640 2641Strain fitness (log2 ratio) -1 0 1at 2639.590 kb on + strandat 2639.590 kb on + strandat 2639.590 kb on + strandat 2639.590 kb on + strandat 2640.420 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF_with10percent_fullN
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2,639,590 + -0.2
2,639,590 + -1.2
2,639,590 + -1.2
2,639,590 + +0.9
2,640,420 + -0.9

Or see this region's nucleotide sequence