Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02187

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,288,870	+		MPMX19_02186	0.73	-2.0
2,288,870	+		MPMX19_02186	0.73	-1.3
2,288,870	+		MPMX19_02186	0.73	+0.5
2,288,870	+		MPMX19_02186	0.73	-0.5
2,288,870	+		MPMX19_02186	0.73	-0.8
2,288,870	+		MPMX19_02186	0.73	-1.3
2,288,870	+		MPMX19_02186	0.73	-1.1
2,288,870	+		MPMX19_02186	0.73	-0.5
2,288,870	+		MPMX19_02186	0.73	+0.2
2,288,870	+		MPMX19_02186	0.73	-1.9
2,288,870	+		MPMX19_02186	0.73	-0.6
2,288,870	+		MPMX19_02186	0.73	-0.8
2,288,870	+		MPMX19_02186	0.73	-0.5
2,288,870	+		MPMX19_02186	0.73	+0.9
2,288,870	+		MPMX19_02186	0.73	-2.9
2,288,870	+		MPMX19_02186	0.73	+0.2
2,288,871	-		MPMX19_02186	0.73	-1.1
2,288,871	-		MPMX19_02186	0.73	-2.2
2,288,871	-		MPMX19_02186	0.73	-2.3
2,288,871	-		MPMX19_02186	0.73	-0.1
2,288,871	-		MPMX19_02186	0.73	-0.8
2,288,871	-		MPMX19_02186	0.73	-0.7
2,288,871	-		MPMX19_02186	0.73	-0.4
2,288,871	-		MPMX19_02186	0.73	-0.5
2,288,871	-		MPMX19_02186	0.73	-0.5
2,288,871	-		MPMX19_02186	0.73	+1.5
2,288,871	-		MPMX19_02186	0.73	-0.5
2,288,871	-		MPMX19_02186	0.73	+0.5
2,288,871	-		MPMX19_02186	0.73	+0.2
2,288,871	-		MPMX19_02186	0.73	-0.3
2,289,056	+		MPMX19_02186	0.78	-0.1
2,289,056	+		MPMX19_02186	0.78	-0.8
2,289,057	-		MPMX19_02186	0.78	-0.5
2,289,057	-		MPMX19_02186	0.78	-0.8
2,289,068	+		MPMX19_02186	0.79	+0.1
2,289,068	+		MPMX19_02186	0.79	-0.8
2,289,068	+		MPMX19_02186	0.79	-1.8
2,289,069	-		MPMX19_02186	0.79	-2.5
2,289,069	-		MPMX19_02186	0.79	-1.1
2,289,069	-		MPMX19_02186	0.79	-0.1
2,289,069	-		MPMX19_02186	0.79	+1.5
2,289,069	-		MPMX19_02186	0.79	-0.7
2,289,069	-		MPMX19_02186	0.79	-1.7
2,289,069	-		MPMX19_02186	0.79	-1.0
2,289,233	+		MPMX19_02186	0.84	-0.1
2,289,233	+		MPMX19_02186	0.84	-1.8
2,289,233	+		MPMX19_02186	0.84	+0.2
2,289,233	+		MPMX19_02186	0.84	-0.7
2,289,233	+		MPMX19_02186	0.84	-0.5
2,289,233	+		MPMX19_02186	0.84	-2.4
2,289,233	+		MPMX19_02186	0.84	-0.3
2,289,233	+		MPMX19_02186	0.84	-1.4
2,289,233	+		MPMX19_02186	0.84	-0.5
2,289,233	+		MPMX19_02186	0.84	-1.1
2,289,233	+		MPMX19_02186	0.84	-0.2
2,289,233	+		MPMX19_02186	0.84	-1.1
2,289,233	+		MPMX19_02186	0.84	+2.5
2,289,234	-		MPMX19_02186	0.84	-1.3
2,289,234	-		MPMX19_02186	0.84	-0.7
2,289,234	-		MPMX19_02186	0.84	-0.9
2,289,234	-		MPMX19_02186	0.84	+1.5
2,289,234	-		MPMX19_02186	0.84	+0.2
2,289,234	-		MPMX19_02186	0.84	-0.1
2,289,234	-		MPMX19_02186	0.84	-0.8
2,289,234	-		MPMX19_02186	0.84	+0.5
2,289,234	-		MPMX19_02186	0.84	+0.3
2,289,234	-		MPMX19_02186	0.84	-0.1
2,289,234	-		MPMX19_02186	0.84	+0.5
2,289,234	-		MPMX19_02186	0.84	+0.9
2,289,234	-		MPMX19_02186	0.84	-0.6
2,289,305	+		MPMX19_02186	0.86	+0.5
2,289,306	-		MPMX19_02186	0.86	+1.1
2,289,306	-		MPMX19_02186	0.86	+0.1
2,289,306	-		MPMX19_02186	0.86	-1.3
2,289,778	+				+0.5
2,289,778	+				+0.2
2,289,778	+				-0.2
2,289,778	+				-0.2
2,289,778	+				-1.5
2,289,778	+				-1.0
2,289,778	+				-0.1
2,289,778	+				+0.9
2,289,778	+				-0.8
2,289,778	+				-0.8
2,289,778	+				-1.1
2,289,778	+				-0.8
2,289,778	+				-0.1
2,289,778	+				+0.5
2,289,779	-				-0.7
2,289,779	-				-0.9
2,289,779	-				+2.2
2,289,779	-				+0.2
2,289,779	-				-1.3
2,289,779	-				-1.1
2,289,779	-				-0.3
2,289,779	-				-2.4
2,289,779	-				-2.0
2,289,779	-				+0.2
2,289,779	-				-1.8
2,289,779	-				+0.8
2,289,779	-				-0.1
2,289,779	-				-2.3
2,289,912	+		MPMX19_02187	0.18	-0.1
2,289,912	+		MPMX19_02187	0.18	+2.3
2,289,912	+		MPMX19_02187	0.18	-0.5
2,289,912	+		MPMX19_02187	0.18	-1.5
2,289,912	+		MPMX19_02187	0.18	-0.5
2,289,912	+		MPMX19_02187	0.18	-2.4
2,289,912	+		MPMX19_02187	0.18	-0.4
2,289,912	+		MPMX19_02187	0.18	-0.1
2,289,912	+		MPMX19_02187	0.18	-2.0
2,289,912	+		MPMX19_02187	0.18	-1.8
2,289,913	-		MPMX19_02187	0.19	-1.3
2,289,913	-		MPMX19_02187	0.19	-1.5
2,289,913	-		MPMX19_02187	0.19	-0.7
2,289,913	-		MPMX19_02187	0.19	-0.3
2,289,913	-		MPMX19_02187	0.19	-1.7
2,289,913	-		MPMX19_02187	0.19	-1.8
2,289,913	-		MPMX19_02187	0.19	+0.9
2,289,913	-		MPMX19_02187	0.19	-1.3
2,289,913	-		MPMX19_02187	0.19	+0.2
2,290,059	+		MPMX19_02187	0.57	+0.5
2,290,059	+		MPMX19_02187	0.57	-0.1
2,290,059	+		MPMX19_02187	0.57	-1.3
2,290,059	+		MPMX19_02187	0.57	-0.8
2,290,060	-		MPMX19_02187	0.57	-1.4
2,290,060	-		MPMX19_02187	0.57	-0.3
2,290,060	-		MPMX19_02187	0.57	-1.3
2,290,161	+		MPMX19_02187	0.84	-0.3
2,290,162	-		MPMX19_02187	0.84	-0.8
2,290,352	+		MPMX19_02188	0.16	-1.8
2,290,353	-		MPMX19_02188	0.16	-1.8
2,290,415	+		MPMX19_02188	0.25	-0.8
2,290,415	+		MPMX19_02188	0.25	-0.5
2,290,415	+		MPMX19_02188	0.25	-2.3
2,290,415	+		MPMX19_02188	0.25	+0.5
2,290,415	+		MPMX19_02188	0.25	-0.5
2,290,415	+		MPMX19_02188	0.25	-1.0
2,290,415	+		MPMX19_02188	0.25	+1.5
2,290,416	-		MPMX19_02188	0.25	-0.8
2,290,416	-		MPMX19_02188	0.25	-0.1
2,290,416	-		MPMX19_02188	0.25	+1.5
2,290,416	-		MPMX19_02188	0.25	+3.5
2,290,416	-		MPMX19_02188	0.25	-1.8
2,290,416	-		MPMX19_02188	0.25	+0.3
2,290,416	-		MPMX19_02188	0.25	-0.1
2,290,416	-		MPMX19_02188	0.25	-1.3
2,290,416	-		MPMX19_02188	0.25	-1.3
2,290,433	+		MPMX19_02188	0.27	+2.5
2,290,433	+		MPMX19_02188	0.27	-1.5
2,290,433	+		MPMX19_02188	0.27	-0.8
2,290,433	+		MPMX19_02188	0.27	-1.1
2,290,433	+		MPMX19_02188	0.27	-1.1
2,290,434	-		MPMX19_02188	0.27	+0.9
2,290,434	-		MPMX19_02188	0.27	-1.8
2,290,434	-		MPMX19_02188	0.27	-1.7
2,290,434	-		MPMX19_02188	0.27	-0.1
2,290,434	-		MPMX19_02188	0.27	-0.1
2,290,434	-		MPMX19_02188	0.27	-0.1
2,290,434	-		MPMX19_02188	0.27	+0.9
2,290,434	-		MPMX19_02188	0.27	-2.5
2,290,898	+				+0.1
2,290,898	+				-0.1
2,290,898	+				-0.3
2,290,898	+				-0.7
2,290,898	+				+0.5
2,290,898	+				-0.8
2,290,899	-				-0.7
2,290,899	-				+0.3
2,290,899	-				-0.2
2,290,899	-				+0.2
2,290,899	-				-0.5
2,290,899	-				-0.8
2,290,899	-				-0.8
2,290,899	-				-2.2
2,290,899	-				-3.0
2,290,899	-				-1.1
2,290,899	-				-1.1
2,290,899	-				-0.8
2,290,899	-				-0.1
2,290,976	+				+1.5
2,290,976	+				-0.5
2,290,976	+				-0.5
2,290,977	-				-0.7
2,290,977	-				-0.5
2,290,977	-				-2.7
2,290,977	-				-1.5
2,290,977	-				-1.5
2,290,977	-				-0.8
2,290,977	-				-0.8
2,291,069	+		MPMX19_02189	0.17	-2.4
2,291,069	+		MPMX19_02189	0.17	+0.2
2,291,069	+		MPMX19_02189	0.17	+0.9
2,291,069	+		MPMX19_02189	0.17	-0.6
2,291,069	+		MPMX19_02189	0.17	+1.2
2,291,069	+		MPMX19_02189	0.17	+0.2
2,291,069	+		MPMX19_02189	0.17	-1.3
2,291,069	+		MPMX19_02189	0.17	+0.5
2,291,069	+		MPMX19_02189	0.17	-0.6
2,291,069	+		MPMX19_02189	0.17	-1.2
2,291,069	+		MPMX19_02189	0.17	+1.5
2,291,069	+		MPMX19_02189	0.17	-2.0
2,291,069	+		MPMX19_02189	0.17	-0.4
2,291,069	+		MPMX19_02189	0.17	-1.4
2,291,069	+		MPMX19_02189	0.17	-1.1
2,291,069	+		MPMX19_02189	0.17	-1.5
2,291,069	+		MPMX19_02189	0.17	-0.2
2,291,069	+		MPMX19_02189	0.17	+0.5
2,291,069	+		MPMX19_02189	0.17	-1.3
2,291,069	+		MPMX19_02189	0.17	-1.1
2,291,069	+		MPMX19_02189	0.17	-1.0
2,291,069	+		MPMX19_02189	0.17	-0.7
2,291,069	+		MPMX19_02189	0.17	-1.5
2,291,069	+		MPMX19_02189	0.17	-0.5
2,291,070	-		MPMX19_02189	0.18	-1.7
2,291,070	-		MPMX19_02189	0.18	-0.6
2,291,070	-		MPMX19_02189	0.18	-0.8
2,291,070	-		MPMX19_02189	0.18	-1.9
2,291,070	-		MPMX19_02189	0.18	-1.7
2,291,070	-		MPMX19_02189	0.18	-1.1
2,291,070	-		MPMX19_02189	0.18	-0.5
2,291,070	-		MPMX19_02189	0.18	-1.0
2,291,070	-		MPMX19_02189	0.18	-0.3
2,291,070	-		MPMX19_02189	0.18	+0.8
2,291,070	-		MPMX19_02189	0.18	-2.0
2,291,070	-		MPMX19_02189	0.18	+0.3
2,291,070	-		MPMX19_02189	0.18	-0.7
2,291,070	-		MPMX19_02189	0.18	+0.2
2,291,070	-		MPMX19_02189	0.18	+0.1
2,291,070	-		MPMX19_02189	0.18	-0.5
2,291,070	-		MPMX19_02189	0.18	+0.2
2,291,070	-		MPMX19_02189	0.18	+1.9
2,291,070	-		MPMX19_02189	0.18	+0.7