Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01478

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,551,233	+				-0.3
1,551,233	+				+0.4
1,551,233	+				-1.1
1,551,233	+				-1.1
1,551,233	+				+0.1
1,551,233	+				-0.3
1,551,233	+				-0.9
1,551,234	-				-1.5
1,551,234	-				+0.4
1,551,234	-				-0.3
1,551,322	+				-1.1
1,551,322	+				-1.5
1,551,322	+				-0.9
1,551,322	+				-0.3
1,551,322	+				+0.4
1,551,323	-				-1.6
1,551,323	-				-0.1
1,551,323	-				-1.6
1,551,323	-				-1.9
1,551,323	-				-1.3
1,551,323	-				+0.0
1,551,323	-				+0.1
1,551,347	+				-0.6
1,551,347	+				-1.3
1,551,347	+				-0.4
1,551,347	+				-1.1
1,551,347	+				-1.1
1,551,347	+				-1.8
1,551,347	+				-0.6
1,551,347	+				-0.6
1,551,347	+				-0.9
1,551,347	+				-1.2
1,551,347	+				-1.1
1,551,347	+				+0.1
1,551,347	+				-0.9
1,551,348	-				-1.8
1,551,348	-				-0.1
1,551,348	-				+1.3
1,551,348	-				-1.2
1,551,348	-				-0.6
1,551,348	-				-1.3
1,551,348	-				-2.2
1,551,348	-				-0.8
1,551,348	-				-0.2
1,551,369	-				-0.5
1,551,408	+				+0.9
1,551,408	+				-0.6
1,551,409	-				-0.9
1,551,409	-				-0.2
1,551,410	+				-1.3
1,551,410	+				-1.1
1,551,410	+				-0.1
1,551,410	+				-0.6
1,551,410	+				-0.3
1,551,410	+				-0.6
1,551,410	+				-1.7
1,551,411	-				+0.1
1,551,411	-				-0.6
1,551,411	-				-0.9
1,551,411	-				-2.9
1,551,413	+				-1.8
1,551,413	+				-0.7
1,551,413	+				+0.1
1,551,413	+				-0.6
1,551,413	+				+0.7
1,551,413	+				+0.4
1,551,413	+				-2.0
1,551,413	+				-1.5
1,551,413	+				-1.6
1,551,413	+				-2.8
1,551,414	-				+0.1
1,551,414	-				-0.7
1,551,414	-				-1.4
1,551,414	-				-1.0
1,551,414	-				-1.0
1,551,414	-				-0.9
1,551,414	-				-1.3
1,551,414	-				+0.1
1,551,414	-				+1.0
1,551,414	-				+0.1
1,551,414	-				-1.8
1,551,414	-				+0.4
1,551,414	-				+0.5
1,551,414	-				-1.1
1,551,414	-				-1.5
1,551,419	-				-0.5
1,551,677	+		MPMX19_01477	0.32	-0.6
1,551,677	+		MPMX19_01477	0.32	-1.1
1,551,677	+		MPMX19_01477	0.32	-0.8
1,551,677	+		MPMX19_01477	0.32	-2.2
1,551,677	+		MPMX19_01477	0.32	-1.8
1,551,678	-		MPMX19_01477	0.32	-0.5
1,551,678	-		MPMX19_01477	0.32	-0.5
1,551,678	-		MPMX19_01477	0.32	-0.0
1,551,678	-		MPMX19_01477	0.32	-1.5
1,551,839	+		MPMX19_01477	0.54	+0.1
1,551,839	+		MPMX19_01477	0.54	+0.1
1,551,839	+		MPMX19_01477	0.54	-1.1
1,551,839	+		MPMX19_01477	0.54	+0.1
1,551,839	+		MPMX19_01477	0.54	-0.3
1,551,839	+		MPMX19_01477	0.54	-0.3
1,551,839	+		MPMX19_01477	0.54	-0.2
1,551,839	+		MPMX19_01477	0.54	-1.5
1,551,839	+		MPMX19_01477	0.54	-0.7
1,551,839	+		MPMX19_01477	0.54	+0.7
1,551,839	+		MPMX19_01477	0.54	-2.1
1,551,839	+		MPMX19_01477	0.54	-1.2
1,551,839	+		MPMX19_01477	0.54	-1.2
1,551,839	+		MPMX19_01477	0.54	-1.1
1,551,839	+		MPMX19_01477	0.54	-1.3
1,551,839	+		MPMX19_01477	0.54	+0.6
1,551,839	+		MPMX19_01477	0.54	-0.9
1,551,839	+		MPMX19_01477	0.54	-0.0
1,551,839	+		MPMX19_01477	0.54	-0.6
1,551,839	+		MPMX19_01477	0.54	-1.8
1,551,839	+		MPMX19_01477	0.54	-0.5
1,551,839	+		MPMX19_01477	0.54	-0.4
1,551,839	+		MPMX19_01477	0.54	-1.5
1,551,839	+		MPMX19_01477	0.54	+0.7
1,551,839	+		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	-0.9
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	+0.0
1,551,840	-		MPMX19_01477	0.54	+1.1
1,551,840	-		MPMX19_01477	0.54	-2.5
1,551,840	-		MPMX19_01477	0.54	+1.7
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	-0.6
1,551,840	-		MPMX19_01477	0.54	-0.3
1,551,840	-		MPMX19_01477	0.54	+0.7
1,551,840	-		MPMX19_01477	0.54	-0.6
1,551,840	-		MPMX19_01477	0.54	-0.3
1,551,840	-		MPMX19_01477	0.54	+0.6
1,551,840	-		MPMX19_01477	0.54	+0.5
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	+0.6
1,551,840	-		MPMX19_01477	0.54	-0.5
1,551,840	-		MPMX19_01477	0.54	+0.3
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	-1.3
1,551,840	-		MPMX19_01477	0.54	-1.0
1,551,840	-		MPMX19_01477	0.54	+0.1
1,551,840	-		MPMX19_01477	0.54	-0.3
1,551,840	-		MPMX19_01477	0.54	-1.1
1,551,840	-		MPMX19_01477	0.54	+0.7
1,551,840	-		MPMX19_01477	0.54	-1.1
1,551,840	-		MPMX19_01477	0.54	+0.5
1,551,840	-		MPMX19_01477	0.54	-0.9
1,551,840	-		MPMX19_01477	0.54	-0.6
1,551,840	-		MPMX19_01477	0.54	+0.5
1,551,840	-		MPMX19_01477	0.54	-1.5
1,551,840	-		MPMX19_01477	0.54	-1.1
1,551,840	-		MPMX19_01477	0.54	+0.5
1,551,840	-		MPMX19_01477	0.54	-1.5
1,551,840	-		MPMX19_01477	0.54	+1.1
1,551,840	-		MPMX19_01477	0.54	-0.2
1,551,923	+		MPMX19_01477	0.66	+0.7
1,551,923	+		MPMX19_01477	0.66	-1.1
1,551,923	+		MPMX19_01477	0.66	-0.6
1,551,923	+		MPMX19_01477	0.66	-1.0
1,551,923	+		MPMX19_01477	0.66	-0.9
1,551,923	+		MPMX19_01477	0.66	-0.3
1,551,924	-		MPMX19_01477	0.66	+0.7
1,551,924	-		MPMX19_01477	0.66	+0.1
1,551,924	-		MPMX19_01477	0.66	-0.6
1,551,932	+		MPMX19_01477	0.67	-1.5
1,551,932	+		MPMX19_01477	0.67	-0.3
1,551,932	+		MPMX19_01477	0.67	+0.5
1,551,932	+		MPMX19_01477	0.67	-0.4
1,551,932	+		MPMX19_01477	0.67	+0.1
1,551,932	+		MPMX19_01477	0.67	-0.9
1,551,932	+		MPMX19_01477	0.67	-2.1
1,551,932	+		MPMX19_01477	0.67	-0.6
1,551,932	+		MPMX19_01477	0.67	-0.6
1,551,932	+		MPMX19_01477	0.67	-0.3
1,551,932	+		MPMX19_01477	0.67	-1.6
1,551,932	+		MPMX19_01477	0.67	-0.3
1,551,932	+		MPMX19_01477	0.67	-0.5
1,551,932	+		MPMX19_01477	0.67	+1.7
1,551,932	+		MPMX19_01477	0.67	+0.7
1,551,932	+		MPMX19_01477	0.67	-0.4
1,551,933	-		MPMX19_01477	0.67	-0.6
1,551,933	-		MPMX19_01477	0.67	+1.3
1,551,933	-		MPMX19_01477	0.67	-0.4
1,551,933	-		MPMX19_01477	0.67	-1.8
1,551,933	-		MPMX19_01477	0.67	-1.3
1,551,933	-		MPMX19_01477	0.67	+0.4
1,551,933	-		MPMX19_01477	0.67	-0.1
1,551,933	-		MPMX19_01477	0.67	+0.1
1,551,933	-		MPMX19_01477	0.67	+0.8
1,551,933	-		MPMX19_01477	0.67	-1.9
1,551,933	-		MPMX19_01477	0.67	-0.3
1,551,933	-		MPMX19_01477	0.67	-0.3
1,551,933	-		MPMX19_01477	0.67	-1.3
1,551,933	-		MPMX19_01477	0.67	-0.9
1,551,933	-		MPMX19_01477	0.67	-0.6
1,551,933	-		MPMX19_01477	0.67	-0.3
1,551,933	-		MPMX19_01477	0.67	-0.3
1,552,178	+				+0.5
1,552,178	+				+1.0
1,552,178	+				-0.6
1,554,476	+				-0.3
1,554,477	-				-1.8
1,554,677	+		MPMX19_01479	0.20	-0.6
1,554,677	+		MPMX19_01479	0.20	-0.3
1,554,677	+		MPMX19_01479	0.20	+1.7
1,554,677	+		MPMX19_01479	0.20	-1.1
1,554,677	+		MPMX19_01479	0.20	-0.6
1,554,678	-		MPMX19_01479	0.20	+0.5
1,554,678	-		MPMX19_01479	0.20	+2.0
1,554,678	-		MPMX19_01479	0.20	+0.5
1,554,678	-		MPMX19_01479	0.20	+0.7
1,554,678	-		MPMX19_01479	0.20	-0.5
1,554,678	-		MPMX19_01479	0.20	+1.1
1,554,678	-		MPMX19_01479	0.20	-1.1
1,554,678	-		MPMX19_01479	0.20	+0.1
1,554,993	+		MPMX19_01479	0.52	+1.2
1,554,993	+		MPMX19_01479	0.52	-1.7
1,554,993	+		MPMX19_01479	0.52	+0.5
1,554,993	+		MPMX19_01479	0.52	+0.2
1,554,993	+		MPMX19_01479	0.52	-0.4
1,554,993	+		MPMX19_01479	0.52	-0.6
1,554,993	+		MPMX19_01479	0.52	-0.9
1,554,993	+		MPMX19_01479	0.52	-1.3
1,554,993	+		MPMX19_01479	0.52	-0.1
1,554,993	+		MPMX19_01479	0.52	+0.6
1,554,993	+		MPMX19_01479	0.52	+1.3
1,554,993	+		MPMX19_01479	0.52	+1.7
1,554,994	-		MPMX19_01479	0.52	+2.3
1,554,994	-		MPMX19_01479	0.52	+0.9
1,554,994	-		MPMX19_01479	0.52	+1.4
1,554,994	-		MPMX19_01479	0.52	-1.5
1,554,994	-		MPMX19_01479	0.52	+0.7
1,554,994	-		MPMX19_01479	0.52	+0.6