Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01469

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,542,097	+				-2.3
1,542,097	+				-0.6
1,542,097	+				-0.6
1,542,097	+				+0.5
1,542,097	+				-0.6
1,542,097	+				+0.7
1,542,098	-				+0.4
1,542,098	-				-0.6
1,542,098	-				-0.6
1,542,098	-				-0.6
1,542,098	-				+0.3
1,542,098	-				+1.7
1,542,098	-				+0.7
1,542,098	-				-1.3
1,542,212	+		MPMX19_01469	0.14	+0.7
1,542,212	+		MPMX19_01469	0.14	+0.3
1,542,212	+		MPMX19_01469	0.14	-0.6
1,542,212	+		MPMX19_01469	0.14	+0.4
1,542,212	+		MPMX19_01469	0.14	+0.1
1,542,212	+		MPMX19_01469	0.14	-0.4
1,542,212	+		MPMX19_01469	0.14	+1.1
1,542,212	+		MPMX19_01469	0.14	-0.8
1,542,212	+		MPMX19_01469	0.14	+1.7
1,542,212	+		MPMX19_01469	0.14	+0.4
1,542,212	+		MPMX19_01469	0.14	+1.1
1,542,212	+		MPMX19_01469	0.14	+0.1
1,542,212	+		MPMX19_01469	0.14	+0.7
1,542,212	+		MPMX19_01469	0.14	+0.1
1,542,212	+		MPMX19_01469	0.14	-1.3
1,542,212	+		MPMX19_01469	0.14	+1.7
1,542,212	+		MPMX19_01469	0.14	-0.9
1,542,212	+		MPMX19_01469	0.14	+0.1
1,542,213	-		MPMX19_01469	0.14	+0.3
1,542,213	-		MPMX19_01469	0.14	+0.1
1,542,213	-		MPMX19_01469	0.14	+0.3
1,542,213	-		MPMX19_01469	0.14	+0.4
1,542,213	-		MPMX19_01469	0.14	+0.1
1,542,213	-		MPMX19_01469	0.14	-1.1
1,542,213	-		MPMX19_01469	0.14	-0.3
1,542,213	-		MPMX19_01469	0.14	-0.1
1,542,213	-		MPMX19_01469	0.14	-0.3
1,542,213	-		MPMX19_01469	0.14	+1.2
1,542,213	-		MPMX19_01469	0.14	-0.1
1,542,213	-		MPMX19_01469	0.14	-2.2
1,542,213	-		MPMX19_01469	0.14	+0.2
1,542,213	-		MPMX19_01469	0.14	-0.6
1,542,213	-		MPMX19_01469	0.14	+1.7
1,542,213	-		MPMX19_01469	0.14	+1.7
1,542,254	+		MPMX19_01469	0.20	+0.4
1,542,254	+		MPMX19_01469	0.20	-0.9
1,542,254	+		MPMX19_01469	0.20	+0.7
1,542,255	-		MPMX19_01469	0.20	+0.7
1,542,255	-		MPMX19_01469	0.20	-1.0
1,542,255	-		MPMX19_01469	0.20	+1.7
1,542,255	-		MPMX19_01469	0.20	-0.3
1,542,389	+		MPMX19_01469	0.37	+1.1
1,542,389	+		MPMX19_01469	0.37	+1.1
1,542,390	-		MPMX19_01469	0.37	-0.9
1,542,390	-		MPMX19_01469	0.37	+0.1
1,542,390	-		MPMX19_01469	0.37	-0.6
1,542,390	-		MPMX19_01469	0.37	+1.3
1,542,390	-		MPMX19_01469	0.37	+0.1
1,542,390	-		MPMX19_01469	0.37	-0.5
1,542,396	-		MPMX19_01469	0.37	-0.6
1,542,605	+		MPMX19_01469	0.64	-2.0
1,542,606	-		MPMX19_01469	0.64	+0.2
1,542,606	-		MPMX19_01469	0.64	+1.1
1,542,719	+		MPMX19_01469	0.78	+0.1
1,542,719	+		MPMX19_01469	0.78	+0.7
1,542,719	+		MPMX19_01469	0.78	-1.3
1,542,720	-		MPMX19_01469	0.78	+1.1
1,542,720	-		MPMX19_01469	0.78	+1.3
1,542,764	+		MPMX19_01469	0.84	-0.9
1,542,764	+		MPMX19_01469	0.84	-0.6
1,542,764	+		MPMX19_01469	0.84	-2.1
1,542,764	+		MPMX19_01469	0.84	+1.1
1,542,764	+		MPMX19_01469	0.84	+0.1
1,542,764	+		MPMX19_01469	0.84	-0.2
1,542,764	+		MPMX19_01469	0.84	-0.2
1,542,764	+		MPMX19_01469	0.84	-0.4
1,542,764	+		MPMX19_01469	0.84	-0.3
1,542,764	+		MPMX19_01469	0.84	-0.5
1,542,764	+		MPMX19_01469	0.84	-0.6
1,542,765	-		MPMX19_01469	0.84	+0.5
1,542,765	-		MPMX19_01469	0.84	+2.0
1,542,765	-		MPMX19_01469	0.84	-2.2
1,542,765	-		MPMX19_01469	0.84	+1.0
1,542,765	-		MPMX19_01469	0.84	-1.1
1,542,765	-		MPMX19_01469	0.84	+0.7
1,542,765	-		MPMX19_01469	0.84	-1.8
1,542,765	-		MPMX19_01469	0.84	+2.7
1,542,765	-		MPMX19_01469	0.84	+1.7
1,542,765	-		MPMX19_01469	0.84	+0.1
1,542,765	-		MPMX19_01469	0.84	-1.3
1,542,765	-		MPMX19_01469	0.84	-0.3
1,543,080	+		MPMX19_01470	0.24	-0.6
1,543,080	+		MPMX19_01470	0.24	-0.9
1,543,080	+		MPMX19_01470	0.24	-0.5
1,543,080	+		MPMX19_01470	0.24	-0.6
1,543,080	+		MPMX19_01470	0.24	-0.9
1,543,081	-		MPMX19_01470	0.24	-0.6
1,543,081	-		MPMX19_01470	0.24	-0.3
1,543,081	-		MPMX19_01470	0.24	-1.8
1,543,228	+		MPMX19_01470	0.42	-0.7
1,543,228	+		MPMX19_01470	0.42	+0.9
1,543,228	+		MPMX19_01470	0.42	+0.1
1,543,228	+		MPMX19_01470	0.42	-0.9
1,543,229	-		MPMX19_01470	0.42	+0.7
1,543,229	-		MPMX19_01470	0.42	+0.3
1,543,229	-		MPMX19_01470	0.42	-0.6
1,543,229	-		MPMX19_01470	0.42	-1.5
1,543,273	+		MPMX19_01470	0.47	+2.3
1,543,273	+		MPMX19_01470	0.47	+0.4
1,543,273	+		MPMX19_01470	0.47	-0.3
1,543,300	+		MPMX19_01470	0.51	+0.7
1,543,301	-		MPMX19_01470	0.51	+2.0
1,543,301	-		MPMX19_01470	0.51	+1.2
1,543,301	-		MPMX19_01470	0.51	-0.1
1,543,301	-		MPMX19_01470	0.51	+2.3
1,543,301	-		MPMX19_01470	0.51	-0.9
1,543,396	+		MPMX19_01470	0.63	+0.0
1,543,396	+		MPMX19_01470	0.63	-2.3
1,543,396	+		MPMX19_01470	0.63	+0.4
1,543,396	+		MPMX19_01470	0.63	+2.3
1,543,396	+		MPMX19_01470	0.63	-0.3
1,543,396	+		MPMX19_01470	0.63	-0.9
1,543,396	+		MPMX19_01470	0.63	-1.8
1,543,396	+		MPMX19_01470	0.63	-1.6
1,543,396	+		MPMX19_01470	0.63	+1.7
1,543,396	+		MPMX19_01470	0.63	+1.7
1,543,396	+		MPMX19_01470	0.63	+0.5
1,543,396	+		MPMX19_01470	0.63	-0.3
1,543,396	+		MPMX19_01470	0.63	+0.7
1,543,396	+		MPMX19_01470	0.63	+0.7
1,543,396	+		MPMX19_01470	0.63	-1.1
1,543,396	+		MPMX19_01470	0.63	-0.9
1,543,396	+		MPMX19_01470	0.63	+1.1
1,543,396	+		MPMX19_01470	0.63	+0.7
1,543,397	-		MPMX19_01470	0.63	-0.3
1,543,397	-		MPMX19_01470	0.63	-1.3
1,543,397	-		MPMX19_01470	0.63	-0.8
1,543,397	-		MPMX19_01470	0.63	-0.3
1,543,397	-		MPMX19_01470	0.63	-0.3
1,543,397	-		MPMX19_01470	0.63	+1.1
1,543,398	+		MPMX19_01470	0.63	-0.2
1,543,398	+		MPMX19_01470	0.63	+0.8
1,543,398	+		MPMX19_01470	0.63	-1.5
1,543,398	+		MPMX19_01470	0.63	-0.9
1,543,398	+		MPMX19_01470	0.63	-0.9
1,543,398	+		MPMX19_01470	0.63	-0.5
1,543,398	+		MPMX19_01470	0.63	+0.1
1,543,398	+		MPMX19_01470	0.63	-1.6
1,543,398	+		MPMX19_01470	0.63	-0.6
1,543,398	+		MPMX19_01470	0.63	-0.3
1,543,398	+		MPMX19_01470	0.63	-0.3
1,543,399	-		MPMX19_01470	0.63	-0.5
1,543,399	-		MPMX19_01470	0.63	-3.6
1,543,399	-		MPMX19_01470	0.63	-1.9
1,543,399	-		MPMX19_01470	0.63	+0.4
1,543,399	-		MPMX19_01470	0.63	-0.6
1,543,399	-		MPMX19_01470	0.63	-0.3
1,543,399	-		MPMX19_01470	0.63	-1.8
1,543,399	-		MPMX19_01470	0.63	-1.6
1,543,399	-		MPMX19_01470	0.63	-0.2
1,543,435	+		MPMX19_01470	0.67	-0.0
1,543,435	+		MPMX19_01470	0.67	+0.5
1,543,435	+		MPMX19_01470	0.67	-1.1
1,543,436	-		MPMX19_01470	0.68	+0.4
1,543,436	-		MPMX19_01470	0.68	-1.6
1,543,436	-		MPMX19_01470	0.68	-0.3
1,543,597	+		MPMX19_01470	0.87	+1.1
1,543,597	+		MPMX19_01470	0.87	+0.3
1,543,597	+		MPMX19_01470	0.87	+0.1
1,543,597	+		MPMX19_01470	0.87	-1.1
1,543,597	+		MPMX19_01470	0.87	-1.3
1,543,597	+		MPMX19_01470	0.87	-0.6
1,543,597	+		MPMX19_01470	0.87	-0.6
1,543,597	+		MPMX19_01470	0.87	+0.1
1,543,597	+		MPMX19_01470	0.87	+0.7
1,543,598	-		MPMX19_01470	0.88	-0.9
1,543,598	-		MPMX19_01470	0.88	-1.5
1,543,598	-		MPMX19_01470	0.88	-0.1
1,543,598	-		MPMX19_01470	0.88	-0.3
1,543,598	-		MPMX19_01470	0.88	+0.6
1,543,598	-		MPMX19_01470	0.88	-0.9
1,543,598	-		MPMX19_01470	0.88	-0.3
1,543,627	+				-0.3
1,543,627	+				-0.4
1,543,628	-				+0.4
1,543,672	+				-0.0
1,543,672	+				+1.7
1,543,672	+				+0.3
1,543,672	+				+0.7
1,543,673	-				-0.8
1,543,673	-				-0.9
1,543,697	-				+0.9
1,543,697	-				-0.3
1,543,747	+				+0.7
1,543,747	+				-1.8
1,543,748	-				+1.7
1,543,748	-				+0.1
1,543,748	-				-0.6
1,543,748	-				-0.2
1,543,748	-				-1.8
1,543,748	-				-0.3
1,543,748	-				+1.4
1,543,748	-				-0.3
1,543,748	-				-0.9
1,543,748	-				-2.2
1,543,777	+				-2.0
1,543,778	-				+0.1
1,543,798	+				-0.6
1,543,798	+				-0.2
1,543,798	+				+1.7
1,543,798	+				-1.8
1,543,798	+				-1.0
1,543,798	+				-1.8
1,543,799	-				+0.7
1,543,799	-				-1.0
1,543,799	-				-0.6
1,543,799	-				+1.0
1,543,822	+				-1.1
1,543,822	+				-0.9
1,543,822	+				+0.1
1,543,822	+				+0.5
1,543,822	+				+1.1
1,543,822	+				-0.6
1,543,822	+				-0.7
1,543,822	+				+0.5
1,543,822	+				+0.2
1,543,822	+				-0.1
1,543,822	+				-1.6
1,543,822	+				-1.0
1,543,822	+				-0.9
1,543,822	+				-0.2
1,543,822	+				-0.9
1,543,822	+				-1.1
1,543,822	+				-1.8
1,543,823	-				-0.6
1,543,823	-				-0.5
1,543,823	-				-0.5
1,543,823	-				+2.7
1,543,823	-				+0.1
1,543,823	-				+1.4
1,543,823	-				-0.3
1,543,823	-				-0.8
1,543,823	-				+1.1
1,543,823	-				-0.5
1,543,823	-				+0.8
1,543,823	-				-0.6
1,543,823	-				+0.4
1,543,823	-				-0.3
1,543,823	-				-0.8
1,543,823	-				+1.7
1,543,855	+				+1.1
1,543,855	+				-1.5
1,543,856	-		MPMX19_01471	0.10	-1.1
1,543,856	-		MPMX19_01471	0.10	-0.9
1,543,856	-		MPMX19_01471	0.10	-0.3
1,543,856	-		MPMX19_01471	0.10	+0.9
1,543,856	-		MPMX19_01471	0.10	+0.9
1,543,856	-		MPMX19_01471	0.10	+0.1
1,543,856	-		MPMX19_01471	0.10	+0.8