Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01462

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,534,148	+		MPMX19_01460	0.73	+0.1
1,534,148	+		MPMX19_01460	0.73	-0.1
1,534,148	+		MPMX19_01460	0.73	-0.6
1,534,148	+		MPMX19_01460	0.73	+0.1
1,534,149	-		MPMX19_01460	0.73	-0.3
1,534,149	-		MPMX19_01460	0.73	-0.6
1,534,305	+				+0.5
1,534,305	+				+1.4
1,534,305	+				+2.3
1,534,305	+				+0.7
1,534,305	+				+1.0
1,534,305	+				-0.6
1,534,305	+				+1.2
1,534,305	+				+0.5
1,534,306	-				-1.8
1,534,306	-				-0.1
1,534,341	+				-0.3
1,534,341	+				-0.2
1,534,341	+				-1.1
1,534,341	+				-0.1
1,534,342	-				-1.5
1,534,624	+		MPMX19_01461	0.39	-0.3
1,534,624	+		MPMX19_01461	0.39	-1.1
1,534,624	+		MPMX19_01461	0.39	-1.8
1,534,624	+		MPMX19_01461	0.39	-0.3
1,534,624	+		MPMX19_01461	0.39	-0.3
1,534,625	-		MPMX19_01461	0.39	-0.3
1,534,625	-		MPMX19_01461	0.39	-0.6
1,534,625	-		MPMX19_01461	0.39	-0.9
1,534,736	+		MPMX19_01461	0.58	-0.3
1,534,736	+		MPMX19_01461	0.58	+0.4
1,534,737	-		MPMX19_01461	0.58	-0.3
1,534,737	-		MPMX19_01461	0.58	-0.3
1,534,858	+		MPMX19_01461	0.79	-1.4
1,534,858	+		MPMX19_01461	0.79	+0.7
1,534,858	+		MPMX19_01461	0.79	-0.7
1,534,858	+		MPMX19_01461	0.79	-0.0
1,534,858	+		MPMX19_01461	0.79	-0.0
1,534,858	+		MPMX19_01461	0.79	-1.5
1,534,858	+		MPMX19_01461	0.79	-0.9
1,534,858	+		MPMX19_01461	0.79	-1.2
1,534,858	+		MPMX19_01461	0.79	-2.0
1,534,858	+		MPMX19_01461	0.79	-0.0
1,534,859	-		MPMX19_01461	0.79	+1.1
1,534,859	-		MPMX19_01461	0.79	-2.9
1,534,859	-		MPMX19_01461	0.79	+0.4
1,534,859	-		MPMX19_01461	0.79	-0.8
1,534,859	-		MPMX19_01461	0.79	-1.0
1,534,859	-		MPMX19_01461	0.79	+0.5
1,534,859	-		MPMX19_01461	0.79	-1.0
1,534,859	-		MPMX19_01461	0.79	-2.1
1,534,859	-		MPMX19_01461	0.79	-0.3
1,534,984	+				-0.9
1,534,985	-				-0.6
1,534,985	-				-0.3
1,534,985	-				-2.2
1,534,985	-				-0.1
1,534,985	-				+1.4
1,534,985	-				-0.3
1,535,008	-				+0.4
1,535,008	-				+1.1
1,535,037	+				-1.5
1,535,037	+				-1.9
1,535,049	+				-0.6
1,535,049	+				-0.3
1,535,049	+				-0.3
1,535,049	+				+0.5
1,535,049	+				-0.6
1,535,049	+				-0.5
1,535,049	+				-0.9
1,535,049	+				+0.7
1,535,049	+				-0.1
1,535,049	+				-0.6
1,535,049	+				-1.9
1,535,049	+				-0.6
1,535,049	+				-0.7
1,535,049	+				-0.5
1,535,049	+				+2.3
1,535,049	+				+1.4
1,535,049	+				-0.6
1,535,049	+				+0.4
1,535,049	+				-2.0
1,535,049	+				-2.2
1,535,049	+				-0.4
1,535,049	+				+0.1
1,535,050	-				-1.6
1,535,050	-				-0.9
1,535,050	-				-0.6
1,535,050	-				+0.9
1,535,050	-				-0.0
1,535,050	-				-0.6
1,535,050	-				-1.8
1,535,050	-				-0.6
1,535,050	-				-1.1
1,535,050	-				-1.1
1,535,050	-				-1.5
1,535,050	-				-0.9
1,535,050	-				+0.7
1,535,050	-				+1.7
1,535,050	-				+1.0
1,535,050	-				-0.6
1,535,050	-				-2.2
1,535,050	-				-0.3
1,535,050	-				+0.7
1,535,050	-				-1.6
1,535,133	+		MPMX19_01462	0.27	+0.1
1,535,133	+		MPMX19_01462	0.27	+1.1
1,535,133	+		MPMX19_01462	0.27	-0.6
1,535,133	+		MPMX19_01462	0.27	-1.1
1,535,134	-		MPMX19_01462	0.28	-2.9
1,535,211	+		MPMX19_01462	0.47	-2.1
1,535,211	+		MPMX19_01462	0.47	-1.1
1,535,211	+		MPMX19_01462	0.47	+0.1
1,535,211	+		MPMX19_01462	0.47	+0.1
1,535,211	+		MPMX19_01462	0.47	-1.6
1,535,211	+		MPMX19_01462	0.47	+0.1
1,535,211	+		MPMX19_01462	0.47	-0.9
1,535,211	+		MPMX19_01462	0.47	-1.8
1,535,211	+		MPMX19_01462	0.47	-1.2
1,535,211	+		MPMX19_01462	0.47	+0.7
1,535,212	-		MPMX19_01462	0.48	+0.7
1,535,212	-		MPMX19_01462	0.48	-0.3
1,535,212	-		MPMX19_01462	0.48	+0.1
1,535,212	-		MPMX19_01462	0.48	-1.1
1,535,212	-		MPMX19_01462	0.48	-0.9
1,535,212	-		MPMX19_01462	0.48	-1.3
1,535,212	-		MPMX19_01462	0.48	+0.7
1,535,462	+				-0.9
1,535,462	+				-0.1
1,535,462	+				-0.9
1,535,462	+				-0.2
1,535,462	+				-0.3
1,535,462	+				+0.3
1,535,463	-				-1.1
1,535,463	-				-0.3
1,535,463	-				+0.4
1,535,463	-				-2.2
1,535,463	-				+0.7
1,535,463	-				+0.1
1,535,665	+		MPMX19_01463	0.20	+0.1
1,535,665	+		MPMX19_01463	0.20	+0.1
1,535,665	+		MPMX19_01463	0.20	-0.9
1,535,665	+		MPMX19_01463	0.20	-0.6
1,535,665	+		MPMX19_01463	0.20	-0.6
1,535,665	+		MPMX19_01463	0.20	-1.5
1,535,665	+		MPMX19_01463	0.20	-0.1
1,535,665	+		MPMX19_01463	0.20	+0.8
1,535,665	+		MPMX19_01463	0.20	-1.3
1,535,665	+		MPMX19_01463	0.20	-2.0
1,535,665	+		MPMX19_01463	0.20	-0.6
1,535,665	+		MPMX19_01463	0.20	-1.6
1,535,665	+		MPMX19_01463	0.20	+0.1
1,535,665	+		MPMX19_01463	0.20	-1.5
1,535,665	+		MPMX19_01463	0.20	-0.9
1,535,666	-		MPMX19_01463	0.21	+0.1
1,535,666	-		MPMX19_01463	0.21	-0.3
1,535,666	-		MPMX19_01463	0.21	+1.0
1,535,666	-		MPMX19_01463	0.21	-0.6
1,535,666	-		MPMX19_01463	0.21	-1.0
1,535,666	-		MPMX19_01463	0.21	-0.9
1,535,666	-		MPMX19_01463	0.21	+0.7
1,535,666	-		MPMX19_01463	0.21	-2.4
1,535,666	-		MPMX19_01463	0.21	-0.4
1,535,666	-		MPMX19_01463	0.21	-1.6
1,535,666	-		MPMX19_01463	0.21	+0.1
1,535,666	-		MPMX19_01463	0.21	+0.4
1,535,666	-		MPMX19_01463	0.21	-1.8
1,535,666	-		MPMX19_01463	0.21	-0.3
1,535,666	-		MPMX19_01463	0.21	-0.3
1,535,980	+		MPMX19_01463	0.60	+0.5
1,535,980	+		MPMX19_01463	0.60	-0.6
1,535,980	+		MPMX19_01463	0.60	-1.9
1,535,980	+		MPMX19_01463	0.60	+1.1
1,535,980	+		MPMX19_01463	0.60	+0.7
1,535,980	+		MPMX19_01463	0.60	-1.6
1,535,980	+		MPMX19_01463	0.60	+0.4
1,535,980	+		MPMX19_01463	0.60	+0.5
1,535,980	+		MPMX19_01463	0.60	+0.3
1,535,980	+		MPMX19_01463	0.60	-0.1
1,535,981	-		MPMX19_01463	0.60	-1.0
1,535,981	-		MPMX19_01463	0.60	-0.3
1,535,981	-		MPMX19_01463	0.60	-0.9
1,535,981	-		MPMX19_01463	0.60	-1.2
1,535,981	-		MPMX19_01463	0.60	+0.7
1,535,981	-		MPMX19_01463	0.60	-1.3
1,535,981	-		MPMX19_01463	0.60	-0.8
1,535,981	-		MPMX19_01463	0.60	-1.3
1,536,137	-		MPMX19_01463	0.80	-0.9
1,536,203	+		MPMX19_01463	0.88	-1.0
1,536,204	-		MPMX19_01463	0.89	-2.6
1,536,204	-		MPMX19_01463	0.89	-0.3
1,536,204	-		MPMX19_01463	0.89	+0.4
1,536,250	+				+0.1
1,536,250	+				-1.3
1,536,326	+				-1.8
1,536,326	+				-2.1
1,536,327	-				-1.2
1,536,371	+				-0.5
1,536,371	+				-1.8
1,536,371	+				-1.1
1,536,371	+				+0.7
1,536,371	+				-2.1
1,536,371	+				-0.9