Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01190

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,236,685	+				+0.7
1,236,685	+				+0.1
1,236,685	+				-0.7
1,236,686	-				-1.8
1,236,686	-				-2.5
1,236,686	-				+0.9
1,236,686	-				-0.7
1,236,800	+				+0.7
1,236,800	+				-1.2
1,236,800	+				-2.0
1,236,800	+				-0.7
1,236,800	+				+1.7
1,236,801	-				-0.5
1,236,801	-				-0.6
1,236,801	-				-0.7
1,236,801	-				+0.7
1,236,806	+				+1.3
1,236,807	-				-0.9
1,236,807	-				-0.3
1,236,935	+		MPMX19_01189	0.23	-1.7
1,236,935	+		MPMX19_01189	0.23	-0.2
1,236,936	-		MPMX19_01189	0.23	-0.3
1,236,951	+		MPMX19_01189	0.25	+0.7
1,236,951	+		MPMX19_01189	0.25	-1.7
1,236,952	-		MPMX19_01189	0.25	-1.8
1,236,956	+		MPMX19_01189	0.25	-0.7
1,236,956	+		MPMX19_01189	0.25	-2.1
1,236,956	+		MPMX19_01189	0.25	-0.6
1,236,956	+		MPMX19_01189	0.25	-0.5
1,236,956	+		MPMX19_01189	0.25	-0.9
1,236,956	+		MPMX19_01189	0.25	-1.2
1,236,957	-		MPMX19_01189	0.25	-1.8
1,236,957	-		MPMX19_01189	0.25	-0.3
1,236,957	-		MPMX19_01189	0.25	-0.3
1,236,957	-		MPMX19_01189	0.25	-0.9
1,236,957	-		MPMX19_01189	0.25	+0.1
1,236,957	-		MPMX19_01189	0.25	-0.8
1,236,957	-		MPMX19_01189	0.25	-0.6
1,236,957	-		MPMX19_01189	0.25	+0.1
1,236,957	-		MPMX19_01189	0.25	-0.8
1,236,957	-		MPMX19_01189	0.25	+0.3
1,236,957	-		MPMX19_01189	0.25	+0.1
1,236,957	-		MPMX19_01189	0.25	-0.1
1,236,957	-		MPMX19_01189	0.25	-1.4
1,237,124	+		MPMX19_01189	0.43	-1.3
1,237,124	+		MPMX19_01189	0.43	-0.7
1,237,124	+		MPMX19_01189	0.43	-1.1
1,237,124	+		MPMX19_01189	0.43	-1.1
1,237,124	+		MPMX19_01189	0.43	-1.1
1,237,124	+		MPMX19_01189	0.43	-1.7
1,237,124	+		MPMX19_01189	0.43	-1.1
1,237,124	+		MPMX19_01189	0.43	-0.7
1,237,124	+		MPMX19_01189	0.43	-0.7
1,237,124	+		MPMX19_01189	0.43	-1.7
1,237,124	+		MPMX19_01189	0.43	-0.7
1,237,124	+		MPMX19_01189	0.43	-2.0
1,237,125	-		MPMX19_01189	0.43	-0.7
1,237,125	-		MPMX19_01189	0.43	-1.3
1,237,125	-		MPMX19_01189	0.43	+0.2
1,237,125	-		MPMX19_01189	0.43	-0.7
1,237,125	-		MPMX19_01189	0.43	-1.8
1,237,125	-		MPMX19_01189	0.43	-1.1
1,237,125	-		MPMX19_01189	0.43	+0.1
1,237,125	-		MPMX19_01189	0.43	-1.8
1,237,125	-		MPMX19_01189	0.43	+0.3
1,237,125	-		MPMX19_01189	0.43	-0.7
1,237,172	+		MPMX19_01189	0.48	-0.3
1,237,172	+		MPMX19_01189	0.48	-2.3
1,237,172	+		MPMX19_01189	0.48	-1.4
1,237,172	+		MPMX19_01189	0.48	+0.3
1,237,172	+		MPMX19_01189	0.48	-1.1
1,237,172	+		MPMX19_01189	0.48	+0.3
1,237,172	+		MPMX19_01189	0.48	+1.7
1,237,172	+		MPMX19_01189	0.48	+1.3
1,237,172	+		MPMX19_01189	0.48	-0.7
1,237,172	+		MPMX19_01189	0.48	-0.9
1,237,172	+		MPMX19_01189	0.48	-2.0
1,237,172	+		MPMX19_01189	0.48	+0.7
1,237,172	+		MPMX19_01189	0.48	-0.6
1,237,173	-		MPMX19_01189	0.48	-0.7
1,237,173	-		MPMX19_01189	0.48	-0.7
1,237,173	-		MPMX19_01189	0.48	-1.3
1,237,173	-		MPMX19_01189	0.48	+0.7
1,237,173	-		MPMX19_01189	0.48	-0.5
1,237,173	-		MPMX19_01189	0.48	+0.7
1,237,173	-		MPMX19_01189	0.48	-1.1
1,237,173	-		MPMX19_01189	0.48	-1.9
1,237,173	-		MPMX19_01189	0.48	+0.1
1,237,173	-		MPMX19_01189	0.48	-1.0
1,237,173	-		MPMX19_01189	0.48	-1.5
1,237,173	-		MPMX19_01189	0.48	+0.1
1,237,173	-		MPMX19_01189	0.48	+0.3
1,237,173	-		MPMX19_01189	0.48	+0.7
1,237,382	+		MPMX19_01189	0.71	-0.3
1,237,382	+		MPMX19_01189	0.71	-0.9
1,237,382	+		MPMX19_01189	0.71	-0.7
1,237,382	+		MPMX19_01189	0.71	-0.9
1,237,382	+		MPMX19_01189	0.71	-3.0
1,237,382	+		MPMX19_01189	0.71	+0.1
1,237,382	+		MPMX19_01189	0.71	-1.1
1,237,382	+		MPMX19_01189	0.71	-0.7
1,237,382	+		MPMX19_01189	0.71	-2.2
1,237,382	+		MPMX19_01189	0.71	+1.0
1,237,382	+		MPMX19_01189	0.71	-1.3
1,237,383	-		MPMX19_01189	0.71	-0.7
1,237,383	-		MPMX19_01189	0.71	-0.7
1,237,383	-		MPMX19_01189	0.71	-1.1
1,237,383	-		MPMX19_01189	0.71	+0.3
1,237,383	-		MPMX19_01189	0.71	-1.2
1,237,383	-		MPMX19_01189	0.71	-2.9
1,237,383	-		MPMX19_01189	0.71	-0.7
1,237,383	-		MPMX19_01189	0.71	-0.3
1,237,394	+		MPMX19_01189	0.72	-1.3
1,237,394	+		MPMX19_01189	0.72	-0.7
1,237,395	-		MPMX19_01189	0.72	-0.7
1,237,395	-		MPMX19_01189	0.72	-0.3
1,237,395	-		MPMX19_01189	0.72	-0.7
1,237,395	-		MPMX19_01189	0.72	-1.1
1,237,562	+				-0.3
1,237,562	+				-1.2
1,237,562	+				-0.4
1,237,562	+				-1.1
1,237,563	-				-1.1
1,237,563	-				+0.1
1,237,680	+				+0.7
1,237,680	+				-1.7
1,237,680	+				+0.7
1,237,680	+				-0.3
1,237,680	+				-1.8
1,237,680	+				-1.6
1,237,680	+				+1.1
1,237,681	-				+0.1
1,237,681	-				-0.3
1,237,681	-				-0.9
1,237,681	-				-0.5
1,237,681	-				+0.7
1,237,681	-				-0.7
1,237,681	-				+1.1
1,237,691	+				-1.8
1,237,691	+				-0.7
1,237,691	+				-0.7
1,237,691	+				-0.9
1,237,691	+				+0.7
1,237,691	+				-1.1
1,237,691	+				-0.3
1,237,691	+				-0.5
1,237,691	+				-1.1
1,237,691	+				-1.5
1,237,691	+				-1.8
1,237,691	+				-1.0
1,237,692	-				+0.7
1,237,692	-				+1.3
1,237,692	-				-1.0
1,237,692	-				-0.3
1,237,692	-				-0.3
1,237,692	-				-0.5
1,237,692	-				-0.3
1,237,692	-				-0.9
1,237,692	-				+1.7
1,237,692	-				-0.7
1,237,692	-				+0.5
1,237,692	-				-1.6
1,237,692	-				-0.5
1,237,692	-				-0.7
1,237,793	-		MPMX19_01190	0.34	+0.7
1,237,874	+		MPMX19_01190	0.55	-2.1
1,237,874	+		MPMX19_01190	0.55	-0.1
1,237,874	+		MPMX19_01190	0.55	-0.2
1,237,875	-		MPMX19_01190	0.55	-0.9
1,237,875	-		MPMX19_01190	0.55	-1.7
1,237,875	-		MPMX19_01190	0.55	-0.7
1,237,916	-		MPMX19_01190	0.66	-0.7
1,238,027	+				+1.1
1,238,027	+				-2.0
1,238,242	+		MPMX19_01191	0.13	+0.7
1,238,243	-		MPMX19_01191	0.13	-1.7
1,238,243	-		MPMX19_01191	0.13	-0.7
1,238,243	-		MPMX19_01191	0.13	-1.9
1,238,243	-		MPMX19_01191	0.13	+0.3
1,238,243	-		MPMX19_01191	0.13	+0.3
1,238,243	-		MPMX19_01191	0.13	-0.3
1,238,304	+		MPMX19_01191	0.17	-0.2
1,238,304	+		MPMX19_01191	0.17	-1.2
1,238,304	+		MPMX19_01191	0.17	+1.1
1,238,304	+		MPMX19_01191	0.17	-0.9
1,238,304	+		MPMX19_01191	0.17	+1.7
1,238,304	+		MPMX19_01191	0.17	-1.0
1,238,304	+		MPMX19_01191	0.17	-0.7
1,238,304	+		MPMX19_01191	0.17	+0.3
1,238,304	+		MPMX19_01191	0.17	+2.7
1,238,304	+		MPMX19_01191	0.17	-1.6
1,238,304	+		MPMX19_01191	0.17	-1.9
1,238,304	+		MPMX19_01191	0.17	-1.1
1,238,304	+		MPMX19_01191	0.17	+0.5
1,238,304	+		MPMX19_01191	0.17	-0.7
1,238,304	+		MPMX19_01191	0.17	+0.7
1,238,305	-		MPMX19_01191	0.17	+1.3
1,238,305	-		MPMX19_01191	0.17	+0.1
1,238,305	-		MPMX19_01191	0.17	-2.5
1,238,305	-		MPMX19_01191	0.17	+0.3
1,238,305	-		MPMX19_01191	0.17	+1.1
1,238,305	-		MPMX19_01191	0.17	-0.7
1,238,305	-		MPMX19_01191	0.17	-0.3
1,238,306	+		MPMX19_01191	0.17	-2.1
1,238,306	+		MPMX19_01191	0.17	-1.8
1,238,307	-		MPMX19_01191	0.17	-1.2
1,238,307	-		MPMX19_01191	0.17	+0.7
1,238,307	-		MPMX19_01191	0.17	-0.3
1,238,485	-		MPMX19_01191	0.28	-0.3
1,238,485	-		MPMX19_01191	0.28	-0.9
1,238,498	+		MPMX19_01191	0.29	-1.7
1,238,499	-		MPMX19_01191	0.29	-0.0
1,238,499	-		MPMX19_01191	0.29	-0.6
1,238,499	-		MPMX19_01191	0.29	+0.1
1,238,939	+		MPMX19_01191	0.57	+0.1
1,238,939	+		MPMX19_01191	0.57	-0.6
1,238,975	+		MPMX19_01191	0.60	-0.6
1,238,975	+		MPMX19_01191	0.60	-0.6
1,239,009	+		MPMX19_01191	0.62	+1.3
1,239,009	+		MPMX19_01191	0.62	-1.1