Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06282 and MPMX19_06283 are separated by 457 nucleotides MPMX19_06283 and MPMX19_06284 are separated by 220 nucleotides
MPMX19_06282: MPMX19_06282 - ATP-dependent RecD-like DNA helicase, at 30,806 to 33,031
_06282
MPMX19_06283: MPMX19_06283 - ISL3 family transposase ISAzba9, at 33,489 to 35,147
_06283
MPMX19_06284: MPMX19_06284 - hypothetical protein, at 35,368 to 36,030
_06284
Position (kb) 33
34
35
36 Strain fitness (log2 ratio) -2
-1
0
1
2 at 32.497 kb on - strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.622 kb on + strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.760 kb on - strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.796 kb on - strand, within MPMX19_06282 at 32.831 kb on + strand at 32.832 kb on - strand at 32.832 kb on - strand at 32.894 kb on + strand at 32.895 kb on - strand at 32.896 kb on + strand at 32.896 kb on + strand at 33.134 kb on - strand at 33.198 kb on - strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.332 kb on + strand at 33.332 kb on + strand at 33.332 kb on + strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.349 kb on - strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.474 kb on + strand at 33.474 kb on + strand at 33.474 kb on + strand at 33.475 kb on - strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.978 kb on - strand, within MPMX19_06283 at 34.060 kb on + strand, within MPMX19_06283 at 34.070 kb on - strand, within MPMX19_06283 at 34.492 kb on + strand, within MPMX19_06283 at 34.492 kb on + strand, within MPMX19_06283 at 34.492 kb on + strand, within MPMX19_06283 at 34.493 kb on - strand, within MPMX19_06283 at 34.493 kb on - strand, within MPMX19_06283 at 34.975 kb on + strand, within MPMX19_06283 at 35.049 kb on + strand at 35.049 kb on + strand at 35.049 kb on + strand at 35.050 kb on - strand at 35.050 kb on - strand at 35.050 kb on - strand at 35.062 kb on + strand at 35.063 kb on - strand at 35.069 kb on + strand at 35.070 kb on - strand at 35.070 kb on - strand at 35.275 kb on - strand at 35.344 kb on + strand at 35.345 kb on - strand at 35.345 kb on - strand at 35.345 kb on - strand at 35.345 kb on - strand at 35.345 kb on - strand at 35.415 kb on + strand at 35.415 kb on + strand at 35.415 kb on + strand at 35.415 kb on + strand at 35.416 kb on - strand at 35.416 kb on - strand at 35.416 kb on - strand at 35.416 kb on - strand at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.442 kb on + strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.443 kb on - strand, within MPMX19_06284 at 35.491 kb on - strand, within MPMX19_06284 at 35.631 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.757 kb on + strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.758 kb on - strand, within MPMX19_06284 at 35.802 kb on + strand, within MPMX19_06284 at 35.802 kb on + strand, within MPMX19_06284 at 35.829 kb on - strand, within MPMX19_06284 at 35.829 kb on - strand, within MPMX19_06284 at 35.829 kb on - strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.892 kb on + strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.893 kb on - strand, within MPMX19_06284 at 35.984 kb on + strand at 35.984 kb on + strand at 35.984 kb on + strand at 35.984 kb on + strand at 35.984 kb on + strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.133 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 32,497 - MPMX19_06282 0.76 -1.1 32,621 + MPMX19_06282 0.82 -0.9 32,621 + MPMX19_06282 0.82 -0.3 32,621 + MPMX19_06282 0.82 -2.3 32,621 + MPMX19_06282 0.82 +0.9 32,621 + MPMX19_06282 0.82 +0.1 32,621 + MPMX19_06282 0.82 -0.4 32,621 + MPMX19_06282 0.82 -1.4 32,621 + MPMX19_06282 0.82 -0.7 32,621 + MPMX19_06282 0.82 -0.4 32,621 + MPMX19_06282 0.82 +0.8 32,622 + MPMX19_06282 0.82 -1.5 32,622 - MPMX19_06282 0.82 +1.3 32,622 - MPMX19_06282 0.82 -0.9 32,622 - MPMX19_06282 0.82 -0.1 32,622 - MPMX19_06282 0.82 -0.8 32,622 - MPMX19_06282 0.82 -0.9 32,622 - MPMX19_06282 0.82 +1.2 32,675 + MPMX19_06282 0.84 +0.3 32,675 + MPMX19_06282 0.84 -0.7 32,675 + MPMX19_06282 0.84 +0.1 32,675 + MPMX19_06282 0.84 -0.4 32,675 + MPMX19_06282 0.84 +0.6 32,675 + MPMX19_06282 0.84 -1.1 32,675 + MPMX19_06282 0.84 +0.1 32,676 - MPMX19_06282 0.84 -0.9 32,676 - MPMX19_06282 0.84 -0.2 32,676 - MPMX19_06282 0.84 -1.5 32,676 - MPMX19_06282 0.84 -0.4 32,760 - MPMX19_06282 0.88 +0.1 32,795 + MPMX19_06282 0.89 -0.4 32,795 + MPMX19_06282 0.89 -1.4 32,795 + MPMX19_06282 0.89 -0.8 32,796 - MPMX19_06282 0.89 +2.2 32,831 + +0.6 32,832 - -0.9 32,832 - -0.4 32,894 + -0.0 32,895 - +0.1 32,896 + +0.6 32,896 + -1.2 33,134 - -0.4 33,198 - +0.6 33,295 + -1.3 33,295 + -1.5 33,295 + +0.4 33,295 + -0.8 33,295 + +0.1 33,295 + -1.0 33,296 - +0.3 33,296 - -1.1 33,296 - -1.2 33,296 - +0.3 33,296 - -0.4 33,296 - +0.9 33,296 - +0.3 33,296 - -1.7 33,332 + +2.1 33,332 + +0.3 33,332 + +0.9 33,333 - +0.1 33,333 - -2.1 33,333 - -0.4 33,333 - -0.9 33,333 - +0.1 33,333 - -1.0 33,333 - +0.4 33,349 - +0.6 33,404 + -0.9 33,404 + +0.1 33,404 + -1.1 33,404 + +0.2 33,404 + -0.7 33,404 + -1.4 33,405 - +0.4 33,405 - +1.6 33,405 - -0.4 33,405 - -1.2 33,405 - +0.1 33,405 - -0.1 33,427 + +0.1 33,427 + +0.8 33,427 + -2.5 33,427 + -0.4 33,428 - -0.7 33,428 - -1.6 33,428 - +0.6 33,428 - -0.9 33,474 + -1.2 33,474 + -1.9 33,474 + -0.3 33,475 - +1.1 33,541 + -1.5 33,541 + -0.4 33,541 + +0.1 33,541 + -0.9 33,541 + +0.1 33,542 - -0.7 33,542 - +0.1 33,542 - +0.1 33,542 - -0.0 33,542 - -1.8 33,976 + MPMX19_06283 0.29 -0.7 33,976 + MPMX19_06283 0.29 -1.2 33,976 + MPMX19_06283 0.29 -0.3 33,976 + MPMX19_06283 0.29 -0.9 33,976 + MPMX19_06283 0.29 -0.4 33,977 - MPMX19_06283 0.29 -0.1 33,977 - MPMX19_06283 0.29 -0.7 33,977 - MPMX19_06283 0.29 -0.9 33,977 - MPMX19_06283 0.29 -2.4 33,977 - MPMX19_06283 0.29 -2.2 33,977 - MPMX19_06283 0.29 -1.7 33,977 - MPMX19_06283 0.29 -0.3 33,978 - MPMX19_06283 0.29 +0.1 34,060 + MPMX19_06283 0.34 -0.8 34,070 - MPMX19_06283 0.35 -0.7 34,492 + MPMX19_06283 0.60 +0.3 34,492 + MPMX19_06283 0.60 -1.8 34,492 + MPMX19_06283 0.60 -1.5 34,493 - MPMX19_06283 0.61 -1.4 34,493 - MPMX19_06283 0.61 -1.7 34,975 + MPMX19_06283 0.90 -0.5 35,049 + -0.4 35,049 + -1.5 35,049 + -0.7 35,050 - +0.4 35,050 - -0.9 35,050 - -1.2 35,062 + -0.2 35,063 - +0.1 35,069 + -0.8 35,070 - -0.4 35,070 - +0.1 35,275 - -0.9 35,344 + -0.4 35,345 - +0.3 35,345 - -0.9 35,345 - -1.2 35,345 - -0.9 35,345 - +0.6 35,415 + -0.4 35,415 + -0.3 35,415 + +0.9 35,415 + +0.5 35,416 - -1.8 35,416 - +0.3 35,416 - +0.6 35,416 - +0.3 35,442 + MPMX19_06284 0.11 +0.6 35,442 + MPMX19_06284 0.11 -1.5 35,442 + MPMX19_06284 0.11 +1.1 35,442 + MPMX19_06284 0.11 -1.2 35,442 + MPMX19_06284 0.11 +0.6 35,442 + MPMX19_06284 0.11 +0.6 35,442 + MPMX19_06284 0.11 +0.1 35,442 + MPMX19_06284 0.11 -0.2 35,442 + MPMX19_06284 0.11 -0.7 35,442 + MPMX19_06284 0.11 -0.8 35,442 + MPMX19_06284 0.11 -0.9 35,442 + MPMX19_06284 0.11 -1.7 35,442 + MPMX19_06284 0.11 +1.1 35,442 + MPMX19_06284 0.11 -0.4 35,443 - MPMX19_06284 0.11 +1.1 35,443 - MPMX19_06284 0.11 -0.4 35,443 - MPMX19_06284 0.11 +0.1 35,443 - MPMX19_06284 0.11 +0.6 35,443 - MPMX19_06284 0.11 +0.6 35,443 - MPMX19_06284 0.11 -2.1 35,443 - MPMX19_06284 0.11 -1.6 35,443 - MPMX19_06284 0.11 -0.5 35,443 - MPMX19_06284 0.11 +0.6 35,443 - MPMX19_06284 0.11 -0.5 35,443 - MPMX19_06284 0.11 +0.8 35,491 - MPMX19_06284 0.19 -0.5 35,631 + MPMX19_06284 0.40 -1.3 35,757 + MPMX19_06284 0.59 -1.1 35,757 + MPMX19_06284 0.59 -0.4 35,757 + MPMX19_06284 0.59 +0.1 35,757 + MPMX19_06284 0.59 -1.4 35,757 + MPMX19_06284 0.59 +0.1 35,757 + MPMX19_06284 0.59 +0.3 35,757 + MPMX19_06284 0.59 -1.4 35,758 - MPMX19_06284 0.59 +0.6 35,758 - MPMX19_06284 0.59 -1.2 35,758 - MPMX19_06284 0.59 -0.7 35,758 - MPMX19_06284 0.59 +0.4 35,758 - MPMX19_06284 0.59 -0.0 35,758 - MPMX19_06284 0.59 -1.2 35,758 - MPMX19_06284 0.59 -1.5 35,758 - MPMX19_06284 0.59 +0.1 35,758 - MPMX19_06284 0.59 +0.6 35,758 - MPMX19_06284 0.59 +0.7 35,802 + MPMX19_06284 0.65 +0.2 35,802 + MPMX19_06284 0.65 +0.1 35,829 - MPMX19_06284 0.70 -0.6 35,829 - MPMX19_06284 0.70 -0.9 35,829 - MPMX19_06284 0.70 -0.2 35,892 + MPMX19_06284 0.79 -0.2 35,892 + MPMX19_06284 0.79 +0.1 35,892 + MPMX19_06284 0.79 -0.4 35,892 + MPMX19_06284 0.79 +0.9 35,892 + MPMX19_06284 0.79 -0.8 35,892 + MPMX19_06284 0.79 +0.1 35,892 + MPMX19_06284 0.79 -2.1 35,892 + MPMX19_06284 0.79 +0.6 35,892 + MPMX19_06284 0.79 +0.5 35,892 + MPMX19_06284 0.79 -0.7 35,892 + MPMX19_06284 0.79 +0.5 35,892 + MPMX19_06284 0.79 -1.2 35,892 + MPMX19_06284 0.79 -0.7 35,892 + MPMX19_06284 0.79 -1.8 35,892 + MPMX19_06284 0.79 -1.5 35,892 + MPMX19_06284 0.79 -0.2 35,892 + MPMX19_06284 0.79 -0.7 35,893 - MPMX19_06284 0.79 -0.8 35,893 - MPMX19_06284 0.79 -0.8 35,893 - MPMX19_06284 0.79 -1.5 35,893 - MPMX19_06284 0.79 -0.7 35,893 - MPMX19_06284 0.79 -1.0 35,893 - MPMX19_06284 0.79 -1.4 35,893 - MPMX19_06284 0.79 -0.9 35,893 - MPMX19_06284 0.79 -1.2 35,893 - MPMX19_06284 0.79 +0.1 35,893 - MPMX19_06284 0.79 +0.1 35,984 + +1.1 35,984 + +0.5 35,984 + +0.8 35,984 + -2.1 35,984 + -1.2 36,132 + -1.9 36,132 + -0.8 36,132 + +0.1 36,132 + -0.2 36,132 + -0.8 36,133 - -0.4
Or see this region's nucleotide sequence