Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05886

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
19,706	+		MPMX19_05885	0.75	+1.4
19,910	+		MPMX19_05885	0.83	+0.6
19,910	+		MPMX19_05885	0.83	-0.4
19,910	+		MPMX19_05885	0.83	-1.9
19,910	+		MPMX19_05885	0.83	-1.8
19,910	+		MPMX19_05885	0.83	-0.4
19,910	+		MPMX19_05885	0.83	-1.2
19,910	+		MPMX19_05885	0.83	+0.4
19,910	+		MPMX19_05885	0.83	+1.6
19,910	+		MPMX19_05885	0.83	+0.9
19,910	+		MPMX19_05885	0.83	-1.0
19,910	+		MPMX19_05885	0.83	+0.4
19,925	+		MPMX19_05885	0.83	-0.0
19,925	+		MPMX19_05885	0.83	-0.2
19,925	+		MPMX19_05885	0.83	-0.7
19,925	+		MPMX19_05885	0.83	-0.2
19,925	+		MPMX19_05885	0.83	-1.7
19,925	+		MPMX19_05885	0.83	-1.4
19,925	+		MPMX19_05885	0.83	-0.0
19,925	+		MPMX19_05885	0.83	-0.6
19,925	+		MPMX19_05885	0.83	-2.2
19,925	+		MPMX19_05885	0.83	+1.6
19,925	+		MPMX19_05885	0.83	-0.4
19,925	+		MPMX19_05885	0.83	-0.7
19,925	+		MPMX19_05885	0.83	-0.7
19,925	+		MPMX19_05885	0.83	-1.3
19,925	+		MPMX19_05885	0.83	+0.2
19,925	+		MPMX19_05885	0.83	-0.4
19,925	+		MPMX19_05885	0.83	-1.6
19,926	-		MPMX19_05885	0.83	+0.3
19,926	-		MPMX19_05885	0.83	-0.0
19,926	-		MPMX19_05885	0.83	+1.0
19,926	-		MPMX19_05885	0.83	-0.7
19,926	-		MPMX19_05885	0.83	-1.6
19,926	-		MPMX19_05885	0.83	+1.2
19,926	-		MPMX19_05885	0.83	-0.7
19,926	-		MPMX19_05885	0.83	+0.6
19,940	+		MPMX19_05885	0.84	-1.0
19,941	-		MPMX19_05885	0.84	-0.7
19,979	+		MPMX19_05885	0.85	+0.3
19,979	+		MPMX19_05885	0.85	+0.4
19,979	+		MPMX19_05885	0.85	+1.2
19,979	+		MPMX19_05885	0.85	-1.2
19,979	+		MPMX19_05885	0.85	-0.3
19,979	+		MPMX19_05885	0.85	-1.4
19,979	+		MPMX19_05885	0.85	+0.3
19,979	+		MPMX19_05885	0.85	-0.3
19,979	+		MPMX19_05885	0.85	-1.4
19,979	+		MPMX19_05885	0.85	-0.4
19,979	+		MPMX19_05885	0.85	-0.7
19,979	+		MPMX19_05885	0.85	-0.6
19,980	-		MPMX19_05885	0.85	-1.3
19,980	-		MPMX19_05885	0.85	-0.5
19,980	-		MPMX19_05885	0.85	+0.4
19,980	-		MPMX19_05885	0.85	-2.2
19,980	-		MPMX19_05885	0.85	+0.1
19,980	-		MPMX19_05885	0.85	-0.7
19,980	-		MPMX19_05885	0.85	-1.1
19,980	-		MPMX19_05885	0.85	-1.4
19,980	-		MPMX19_05885	0.85	-1.0
19,980	-		MPMX19_05885	0.85	-0.2
19,980	-		MPMX19_05885	0.85	-0.0
19,980	-		MPMX19_05885	0.85	+0.6
19,980	-		MPMX19_05885	0.85	-0.0
19,980	-		MPMX19_05885	0.85	-0.4
19,980	-		MPMX19_05885	0.85	-1.2
19,980	-		MPMX19_05885	0.85	-0.9
20,100	-		MPMX19_05885	0.89	-1.0
20,100	-		MPMX19_05885	0.89	-0.7
20,100	-		MPMX19_05885	0.89	-0.1
20,111	+		MPMX19_05885	0.90	-1.4
20,111	+		MPMX19_05885	0.90	+0.3
20,112	-		MPMX19_05885	0.90	-1.0
20,112	-		MPMX19_05885	0.90	+0.3
20,112	-		MPMX19_05885	0.90	-0.4
20,112	-		MPMX19_05885	0.90	-1.0
20,112	-		MPMX19_05885	0.90	+0.6
20,112	-		MPMX19_05885	0.90	+0.3
20,112	-		MPMX19_05885	0.90	-0.4
20,112	-		MPMX19_05885	0.90	-0.3
20,112	-		MPMX19_05885	0.90	-0.7
20,112	-		MPMX19_05885	0.90	-0.7
20,429	+				-0.0
20,429	+				-0.6
20,429	+				+1.3
20,429	+				-1.0
20,430	-				-0.0
20,430	-				-0.6
20,430	-				-0.0
20,430	-				-0.4
20,430	-				-1.3
20,430	-				-0.7
20,430	-				-1.0
20,447	+				+0.3
20,447	+				-1.6
20,447	+				+0.4
20,447	+				-1.1
20,447	+				+0.6
20,447	+				+0.6
20,448	-				-1.7
20,448	-				-0.6
20,448	-				+0.6
20,448	-				-1.8
20,479	+				-0.5
20,480	-				+0.4
20,480	-				-1.8
20,516	-				-1.5
20,534	+				-0.2
20,547	-				+1.6
20,700	+				-0.2
20,701	-				+0.6
20,738	+				-0.5
20,738	+				-1.9
20,738	+				-0.7
20,738	+				+0.6
20,738	+				+1.2
20,738	+				-0.0
20,738	+				-0.4
20,738	+				-0.5
20,738	+				-0.6
20,738	+				-1.6
20,738	+				-0.0
20,738	+				-0.0
20,739	-				-0.4
20,739	-				-1.4
20,739	-				-0.9
20,739	-				-0.0
20,739	-				-1.6
20,805	+		MPMX19_05886	0.10	-1.2
20,805	+		MPMX19_05886	0.10	+0.5
20,921	+		MPMX19_05886	0.20	-0.4
20,921	+		MPMX19_05886	0.20	+0.6
20,921	+		MPMX19_05886	0.20	-2.0
20,921	+		MPMX19_05886	0.20	+0.4
20,921	+		MPMX19_05886	0.20	-1.6
20,922	-		MPMX19_05886	0.20	-0.9
20,922	-		MPMX19_05886	0.20	+0.9
20,922	-		MPMX19_05886	0.20	-1.2
20,922	-		MPMX19_05886	0.20	-0.4
20,922	-		MPMX19_05886	0.20	-0.8
20,922	-		MPMX19_05886	0.20	+0.5
21,347	+		MPMX19_05886	0.53	+0.6
21,347	+		MPMX19_05886	0.53	-1.2
21,347	+		MPMX19_05886	0.53	-0.7
21,347	+		MPMX19_05886	0.53	+1.6
21,419	+		MPMX19_05886	0.59	+0.4
21,419	+		MPMX19_05886	0.59	-0.7
21,419	+		MPMX19_05886	0.59	-1.4
21,419	+		MPMX19_05886	0.59	-2.0
21,419	+		MPMX19_05886	0.59	+0.3
21,419	+		MPMX19_05886	0.59	-0.0
21,419	+		MPMX19_05886	0.59	-0.7
21,419	+		MPMX19_05886	0.59	-0.0
21,419	+		MPMX19_05886	0.59	-1.0
21,419	+		MPMX19_05886	0.59	+1.3
21,419	+		MPMX19_05886	0.59	+1.6
21,419	-		MPMX19_05886	0.59	-0.4
21,420	-		MPMX19_05886	0.59	-0.0
21,420	-		MPMX19_05886	0.59	-1.3
21,420	-		MPMX19_05886	0.59	-1.2
21,420	-		MPMX19_05886	0.59	+0.2
21,420	-		MPMX19_05886	0.59	-0.9
21,420	-		MPMX19_05886	0.59	-0.0
21,712	+		MPMX19_05886	0.82	-0.0
21,712	+		MPMX19_05886	0.82	+0.6
21,712	+		MPMX19_05886	0.82	+0.6
21,712	+		MPMX19_05886	0.82	-0.4
21,712	+		MPMX19_05886	0.82	-0.0
21,712	+		MPMX19_05886	0.82	-0.0
21,712	+		MPMX19_05886	0.82	-0.3
21,713	-		MPMX19_05886	0.83	-1.6
21,713	-		MPMX19_05886	0.83	+0.6
21,713	-		MPMX19_05886	0.83	-0.3
21,713	-		MPMX19_05886	0.83	-0.5
21,713	-		MPMX19_05886	0.83	-1.2
21,713	-		MPMX19_05886	0.83	-0.8
21,713	-		MPMX19_05886	0.83	-0.4
21,815	+				-0.7
21,815	+				-0.3
21,816	-				-0.0
21,842	+				-0.7
21,842	+				+0.6
21,842	+				-0.7
21,842	+				+1.0
21,842	+				-0.0
21,842	+				-0.4
21,842	+				+0.2
21,842	+				-0.4
21,842	+				-0.7
21,842	+				+0.4
21,842	+				-0.1
21,842	+				-1.0
21,842	+				-0.2
21,842	+				-0.7
21,842	+				+0.6
21,842	+				-0.4
21,842	+				-0.9
21,842	+				+0.6
21,843	-				-2.4
21,843	-				-0.7
21,843	-				-0.4
21,843	-				-0.2
21,843	-				+0.6
21,843	-				-0.4
21,843	-				-0.7
21,843	-				+0.6
21,843	-				+0.4
21,843	-				-0.4
21,843	-				-1.0
21,843	-				-1.2
21,843	-				-0.7
21,843	-				-1.2
21,843	-				-2.3
21,908	+				-1.0
21,909	-				-1.0
21,909	-				-0.4
22,022	+				+0.3
22,022	+				-0.7
22,022	+				-0.4
22,022	+				+0.2
22,022	+				-0.5
22,022	+				+0.6
22,022	+				-1.1
22,022	+				-0.1
22,022	+				+0.6
22,022	+				-0.4
22,022	+				+0.6
22,022	+				-0.0
22,022	+				-0.5
22,022	+				-1.4
22,022	+				-0.1
22,023	-				-1.0
22,023	-				+0.6
22,023	-				+0.8
22,023	-				+0.6
22,023	-				-1.2
22,023	-				+4.2
22,023	-				+0.8
22,023	-				-0.7
22,023	-				-1.9
22,023	-				-0.0
22,023	-				-0.7
22,023	-				+0.8
22,023	-				-0.4
22,023	-				-0.6
22,023	-				-1.2
22,023	-				+0.3
22,023	-				-0.0
22,023	-				+0.4
22,023	-				+0.6
22,023	-				+1.6
22,023	-				-1.5
22,194	+		MPMX19_05887	0.11	-1.4
22,194	+		MPMX19_05887	0.11	-0.4
22,194	+		MPMX19_05887	0.11	-0.5
22,194	+		MPMX19_05887	0.11	-2.3
22,195	-		MPMX19_05887	0.11	-0.4
22,195	-		MPMX19_05887	0.11	-0.0
22,195	-		MPMX19_05887	0.11	-0.7
22,195	-		MPMX19_05887	0.11	-1.0
22,195	-		MPMX19_05887	0.11	-0.3
22,195	-		MPMX19_05887	0.11	-1.4
22,195	-		MPMX19_05887	0.11	-0.4
22,203	+		MPMX19_05887	0.12	-2.0
22,203	+		MPMX19_05887	0.12	-1.4
22,204	-		MPMX19_05887	0.12	+0.6
22,204	-		MPMX19_05887	0.12	-2.9
22,204	-		MPMX19_05887	0.12	-2.3
22,204	-		MPMX19_05887	0.12	-1.3
22,377	+		MPMX19_05887	0.29	+0.5
22,377	+		MPMX19_05887	0.29	-0.7
22,377	+		MPMX19_05887	0.29	-1.8
22,377	+		MPMX19_05887	0.29	-2.6
22,377	+		MPMX19_05887	0.29	-0.4
22,378	-		MPMX19_05887	0.29	-0.7
22,506	+		MPMX19_05887	0.42	-0.7
22,506	+		MPMX19_05887	0.42	-0.1
22,506	+		MPMX19_05887	0.42	+1.6
22,506	+		MPMX19_05887	0.42	-1.7
22,506	+		MPMX19_05887	0.42	-0.3
22,506	+		MPMX19_05887	0.42	+1.0
22,506	+		MPMX19_05887	0.42	-0.4
22,506	+		MPMX19_05887	0.42	-1.2
22,506	+		MPMX19_05887	0.42	-1.2
22,506	+		MPMX19_05887	0.42	-0.2
22,506	+		MPMX19_05887	0.42	-1.4
22,506	+		MPMX19_05887	0.42	-0.4
22,506	+		MPMX19_05887	0.42	-1.2
22,506	+		MPMX19_05887	0.42	+0.6
22,506	+		MPMX19_05887	0.42	-2.0
22,506	+		MPMX19_05887	0.42	-1.2
22,506	+		MPMX19_05887	0.42	-0.7
22,507	-		MPMX19_05887	0.42	-0.4
22,507	-		MPMX19_05887	0.42	-2.0
22,507	-		MPMX19_05887	0.42	+1.0
22,507	-		MPMX19_05887	0.42	-0.6
22,507	-		MPMX19_05887	0.42	+0.6
22,507	-		MPMX19_05887	0.42	-0.7
22,507	-		MPMX19_05887	0.42	-0.7
22,507	-		MPMX19_05887	0.42	-1.4
22,507	-		MPMX19_05887	0.42	-2.2
22,507	-		MPMX19_05887	0.42	-1.0
22,507	-		MPMX19_05887	0.42	+1.0
22,507	-		MPMX19_05887	0.42	-1.4
22,507	-		MPMX19_05887	0.42	-1.2
22,686	+		MPMX19_05887	0.60	+0.3
22,687	-		MPMX19_05887	0.60	-0.5
22,687	-		MPMX19_05887	0.60	-0.5