Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03887

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
159,389	+				-1.3
159,389	+				-0.1
159,389	+				-0.4
159,389	+				-2.2
159,390	-				-0.1
159,390	-				+1.9
159,542	+				+0.1
159,543	-				-1.2
159,693	-				+0.1
159,693	-				+0.2
159,693	-				-0.4
159,693	-				-0.1
159,761	+				-0.1
159,821	+				-0.8
159,821	+				-0.8
159,821	+				+0.7
159,821	+				+0.4
159,821	+				-0.7
159,821	+				-1.8
159,822	-				-0.4
159,822	-				-1.1
159,822	-				+1.9
159,822	-				-0.1
159,822	-				-0.5
159,822	-				+0.5
159,822	-				-0.1
159,822	-				-2.0
159,822	-				+0.0
159,822	-				-1.1
159,890	+				-0.8
159,890	+				-0.5
159,890	+				-0.1
159,890	+				-0.5
159,890	+				+0.2
159,891	-				-0.5
159,891	-				+2.1
159,891	-				-1.4
159,950	+				-0.8
159,950	+				-0.7
159,950	+				-0.1
159,950	+				-1.3
159,950	+				-0.8
159,950	+				-1.3
159,950	+				-1.2
159,950	+				+0.5
159,951	-				-1.1
159,951	-				-0.6
159,951	-				-0.7
159,951	-				+1.5
159,951	-				-1.3
159,951	-				-1.5
159,951	-				-0.1
159,951	-				+0.7
159,951	-				-1.1
159,951	-				+0.1
160,010	+				-0.8
160,010	+				-0.1
160,010	+				-1.7
160,011	-				-0.8
160,011	-				-1.8
160,011	-				-1.8
160,019	+				-0.1
160,019	+				-0.3
160,019	+				-1.3
160,019	+				-2.1
160,020	-				-1.1
160,020	-				-0.7
160,079	+				-2.0
160,079	+				-0.1
160,080	-				+0.5
160,133	+				+1.5
160,133	+				+1.5
160,133	+				+1.5
160,133	+				+0.5
160,134	-				-1.1
160,134	-				-0.3
160,134	-				+0.2
160,134	-				-1.7
160,134	-				+0.2
160,461	-				-1.2
160,847	+		MPMX19_03887	0.28	-0.4
160,853	+		MPMX19_03887	0.28	-0.8
160,853	+		MPMX19_03887	0.28	-0.1
160,853	+		MPMX19_03887	0.28	-1.0
160,853	+		MPMX19_03887	0.28	-1.5
160,853	+		MPMX19_03887	0.28	-1.2
160,854	-		MPMX19_03887	0.28	-2.1
161,057	+		MPMX19_03887	0.38	+1.1
161,058	-		MPMX19_03887	0.38	-1.8
161,195	+		MPMX19_03887	0.46	+0.6
161,195	+		MPMX19_03887	0.46	-1.5
161,195	+		MPMX19_03887	0.46	-1.4
161,196	-		MPMX19_03887	0.46	-1.3
161,196	-		MPMX19_03887	0.46	-1.0
161,196	-		MPMX19_03887	0.46	-1.1
161,196	-		MPMX19_03887	0.46	+0.7
161,196	-		MPMX19_03887	0.46	+0.5
161,456	+		MPMX19_03887	0.59	-0.1
161,456	+		MPMX19_03887	0.59	-0.8
161,456	+		MPMX19_03887	0.59	-0.7
161,456	+		MPMX19_03887	0.59	+0.5
161,456	+		MPMX19_03887	0.59	-0.8
161,457	-		MPMX19_03887	0.59	-0.9
161,457	-		MPMX19_03887	0.59	-0.1
161,457	-		MPMX19_03887	0.59	-0.1
161,457	-		MPMX19_03887	0.59	-2.5
161,457	-		MPMX19_03887	0.59	-0.1
161,457	-		MPMX19_03887	0.59	-2.3
161,457	-		MPMX19_03887	0.59	-0.3
161,472	-		MPMX19_03887	0.60	-0.8
161,472	-		MPMX19_03887	0.60	-0.3
161,552	-		MPMX19_03887	0.64	-0.8
161,675	+		MPMX19_03887	0.71	-0.8
161,675	+		MPMX19_03887	0.71	-1.3
161,675	+		MPMX19_03887	0.71	+0.5
161,675	+		MPMX19_03887	0.71	-0.1
161,675	+		MPMX19_03887	0.71	-2.3
161,675	+		MPMX19_03887	0.71	-1.3
161,676	-		MPMX19_03887	0.71	+1.5
161,676	-		MPMX19_03887	0.71	-0.1
161,676	-		MPMX19_03887	0.71	-1.5
161,676	-		MPMX19_03887	0.71	-0.1
161,676	-		MPMX19_03887	0.71	-1.8
161,717	+		MPMX19_03887	0.73	-0.1
161,912	+		MPMX19_03887	0.83	+0.5
161,912	+		MPMX19_03887	0.83	-0.8
161,912	+		MPMX19_03887	0.83	-1.0
161,913	-		MPMX19_03887	0.83	+0.5
161,913	-		MPMX19_03887	0.83	-0.5
161,913	-		MPMX19_03887	0.83	-0.8
161,913	-		MPMX19_03887	0.83	-1.1
161,976	-		MPMX19_03887	0.86	+2.1
161,978	+		MPMX19_03887	0.86	-0.5
161,978	+		MPMX19_03887	0.86	+1.2
161,978	+		MPMX19_03887	0.86	+0.9
161,978	+		MPMX19_03887	0.86	-1.3
161,978	+		MPMX19_03887	0.86	-0.5
161,978	+		MPMX19_03887	0.86	+0.3
161,978	+		MPMX19_03887	0.86	-1.3
161,978	+		MPMX19_03887	0.86	-0.7
161,978	+		MPMX19_03887	0.86	+0.5
161,978	+		MPMX19_03887	0.86	-2.3
161,979	-		MPMX19_03887	0.86	-1.5
161,979	-		MPMX19_03887	0.86	+1.5
161,979	-		MPMX19_03887	0.86	-1.1
161,979	-		MPMX19_03887	0.86	-0.4
161,979	-		MPMX19_03887	0.86	-0.5
161,979	-		MPMX19_03887	0.86	-0.8
161,979	-		MPMX19_03887	0.86	-2.0
161,979	-		MPMX19_03887	0.86	-0.5
162,116	+				-0.4
162,116	+				-1.1
162,117	-				-1.6
162,147	+				+0.9
162,147	+				-1.3
162,147	+				-2.3
162,148	-				-0.1
162,148	-				-1.1
162,270	-				-0.6
162,283	+				-0.1
162,283	+				+0.6
162,284	-				+2.1
162,284	-				-0.8
162,284	-				-0.3
162,284	-				+0.9
162,284	-				-2.1
162,284	-				+0.2
162,284	-				-0.5
162,284	-				+0.9
162,284	-				-1.7
162,284	-				-1.1
162,287	+				-1.1
162,287	+				-1.3
162,287	+				-1.1
162,287	+				-0.1
162,287	+				-0.5
162,287	+				-1.0
162,288	-				-0.3
162,288	-				+1.5
162,288	-				-0.1
162,409	+				-0.5
162,783	+		MPMX19_03888	0.22	-1.0
162,783	+		MPMX19_03888	0.22	-1.8
162,834	+		MPMX19_03888	0.25	-1.6
162,834	+		MPMX19_03888	0.25	+0.6
162,834	+		MPMX19_03888	0.25	-0.5
162,834	+		MPMX19_03888	0.25	-1.3
162,834	+		MPMX19_03888	0.25	-1.1
162,834	+		MPMX19_03888	0.25	+1.5
162,834	+		MPMX19_03888	0.25	-0.0
162,834	+		MPMX19_03888	0.25	-0.0
162,835	-		MPMX19_03888	0.25	-1.5
162,835	-		MPMX19_03888	0.25	-1.8
162,835	-		MPMX19_03888	0.25	-1.1
162,835	-		MPMX19_03888	0.25	-1.3
162,835	-		MPMX19_03888	0.25	-2.4
162,835	-		MPMX19_03888	0.25	-1.1
162,835	-		MPMX19_03888	0.25	-1.3
162,957	+		MPMX19_03888	0.33	+0.2
162,957	+		MPMX19_03888	0.33	-1.1
162,957	+		MPMX19_03888	0.33	-0.1
162,957	+		MPMX19_03888	0.33	-1.3
162,957	+		MPMX19_03888	0.33	-0.1
162,957	+		MPMX19_03888	0.33	-0.5
162,957	+		MPMX19_03888	0.33	-0.3
162,958	-		MPMX19_03888	0.33	-2.6
162,958	-		MPMX19_03888	0.33	+0.2
162,958	-		MPMX19_03888	0.33	-0.6
162,958	-		MPMX19_03888	0.33	-1.1
162,958	-		MPMX19_03888	0.33	-0.5
163,011	+		MPMX19_03888	0.37	-0.4
163,011	+		MPMX19_03888	0.37	-1.1
163,011	+		MPMX19_03888	0.37	-2.0
163,011	+		MPMX19_03888	0.37	-1.2
163,011	+		MPMX19_03888	0.37	-1.1
163,011	+		MPMX19_03888	0.37	-1.2
163,012	-		MPMX19_03888	0.37	-0.8
163,012	-		MPMX19_03888	0.37	+0.2
163,032	+		MPMX19_03888	0.38	+2.1
163,032	+		MPMX19_03888	0.38	+0.5
163,033	-		MPMX19_03888	0.38	-2.0
163,033	-		MPMX19_03888	0.38	-1.3
163,175	+		MPMX19_03888	0.47	-1.1
163,176	-		MPMX19_03888	0.47	-0.5