Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02495

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,613,245	+		MPMX19_02494	0.62	-0.9
2,613,245	+		MPMX19_02494	0.62	-0.9
2,613,245	+		MPMX19_02494	0.62	-1.9
2,613,245	+		MPMX19_02494	0.62	-0.9
2,613,245	+		MPMX19_02494	0.62	-0.7
2,613,245	+		MPMX19_02494	0.62	-0.6
2,613,245	+		MPMX19_02494	0.62	-0.6
2,613,245	+		MPMX19_02494	0.62	-1.6
2,613,245	+		MPMX19_02494	0.62	-0.6
2,613,245	+		MPMX19_02494	0.62	-0.6
2,613,245	+		MPMX19_02494	0.62	+1.1
2,613,245	+		MPMX19_02494	0.62	-1.6
2,613,245	+		MPMX19_02494	0.62	-2.1
2,613,246	-		MPMX19_02494	0.63	-0.6
2,613,246	-		MPMX19_02494	0.63	-0.6
2,613,246	-		MPMX19_02494	0.63	-1.2
2,613,246	-		MPMX19_02494	0.63	-1.4
2,613,246	-		MPMX19_02494	0.63	-0.9
2,613,246	-		MPMX19_02494	0.63	-0.4
2,613,387	+				-0.4
2,613,388	-				-0.4
2,613,529	+				-0.6
2,613,529	+				-1.4
2,613,530	-				+0.4
2,613,530	-				+0.4
2,613,530	-				-0.6
2,613,682	+		MPMX19_02495	0.15	-1.6
2,613,682	+		MPMX19_02495	0.15	-0.2
2,613,682	+		MPMX19_02495	0.15	+0.1
2,613,682	+		MPMX19_02495	0.15	-1.2
2,613,683	-		MPMX19_02495	0.15	-1.6
2,613,683	-		MPMX19_02495	0.15	-0.9
2,613,853	+		MPMX19_02495	0.32	-1.4
2,614,045	+		MPMX19_02495	0.51	+0.8
2,614,045	+		MPMX19_02495	0.51	-2.4
2,614,045	+		MPMX19_02495	0.51	-0.6
2,614,045	+		MPMX19_02495	0.51	+0.1
2,614,045	+		MPMX19_02495	0.51	-1.2
2,614,045	+		MPMX19_02495	0.51	+0.8
2,614,045	+		MPMX19_02495	0.51	-0.6
2,614,045	+		MPMX19_02495	0.51	-1.8
2,614,045	+		MPMX19_02495	0.51	-0.4
2,614,046	-		MPMX19_02495	0.51	+0.1
2,614,046	-		MPMX19_02495	0.51	-1.2
2,614,057	+		MPMX19_02495	0.52	-2.8
2,614,057	+		MPMX19_02495	0.52	+0.8
2,614,057	+		MPMX19_02495	0.52	-0.9
2,614,057	+		MPMX19_02495	0.52	-1.9
2,614,057	+		MPMX19_02495	0.52	+0.8
2,614,057	+		MPMX19_02495	0.52	-0.6
2,614,057	+		MPMX19_02495	0.52	-1.2
2,614,057	+		MPMX19_02495	0.52	+0.4
2,614,057	+		MPMX19_02495	0.52	-0.9
2,614,057	+		MPMX19_02495	0.52	-0.9
2,614,058	-		MPMX19_02495	0.53	+0.4
2,614,058	-		MPMX19_02495	0.53	-1.2
2,614,058	-		MPMX19_02495	0.53	-0.6
2,614,058	-		MPMX19_02495	0.53	+0.4
2,614,058	-		MPMX19_02495	0.53	-0.9
2,614,058	-		MPMX19_02495	0.53	+1.0
2,614,058	-		MPMX19_02495	0.53	+0.8
2,614,058	-		MPMX19_02495	0.53	+0.4
2,614,129	+		MPMX19_02495	0.60	-1.6
2,614,129	+		MPMX19_02495	0.60	-0.6
2,614,129	+		MPMX19_02495	0.60	+0.8
2,614,129	+		MPMX19_02495	0.60	-0.9
2,614,129	+		MPMX19_02495	0.60	-0.6
2,614,130	-		MPMX19_02495	0.60	-0.6
2,614,130	-		MPMX19_02495	0.60	-0.2
2,614,130	-		MPMX19_02495	0.60	+0.4
2,614,130	-		MPMX19_02495	0.60	-0.9
2,614,130	-		MPMX19_02495	0.60	+1.0
2,614,287	-		MPMX19_02495	0.75	+1.0
2,614,288	+		MPMX19_02495	0.75	-0.9
2,614,288	+		MPMX19_02495	0.75	-0.2
2,614,288	+		MPMX19_02495	0.75	-0.6
2,614,288	+		MPMX19_02495	0.75	-1.2
2,614,289	-		MPMX19_02495	0.75	-0.6
2,614,289	-		MPMX19_02495	0.75	-2.1
2,614,289	-		MPMX19_02495	0.75	-0.2
2,614,289	-		MPMX19_02495	0.75	+0.1
2,614,289	-		MPMX19_02495	0.75	-1.8
2,614,378	+		MPMX19_02495	0.84	-0.6
2,614,378	+		MPMX19_02495	0.84	-2.1
2,614,378	+		MPMX19_02495	0.84	-0.2
2,614,378	+		MPMX19_02495	0.84	-0.4
2,614,378	+		MPMX19_02495	0.84	-0.6
2,614,379	-		MPMX19_02495	0.84	+0.4
2,614,379	-		MPMX19_02495	0.84	-0.6
2,614,379	-		MPMX19_02495	0.84	+0.4
2,614,379	-		MPMX19_02495	0.84	-0.4
2,614,379	-		MPMX19_02495	0.84	+1.1
2,614,507	+				-0.2
2,614,508	-				-0.6
2,614,508	-				-1.2
2,614,583	+				-0.4
2,614,583	+				-1.4
2,614,583	+				-0.9
2,614,583	+				-0.2
2,614,583	+				+0.4
2,614,583	+				-1.9
2,614,583	+				-1.3
2,614,583	+				-0.9
2,614,583	+				+1.0
2,614,583	+				+0.1
2,614,583	+				-0.2
2,614,584	-				+0.6
2,614,584	-				-1.4
2,614,584	-				+0.7
2,614,584	-				-0.4
2,614,584	-				+0.7
2,614,584	-				+0.2
2,614,584	-				+0.8
2,614,584	-				+0.1
2,614,584	-				-0.5
2,614,584	-				+0.4
2,614,584	-				-1.6
2,614,584	-				-0.6
2,614,584	-				-1.1
2,614,584	-				-0.6
2,614,584	-				-0.6
2,614,584	-				-2.4
2,614,585	+				+0.4
2,614,585	+				-0.9
2,614,585	+				-1.6
2,614,585	+				-1.8
2,614,585	+				+0.4
2,614,586	-				+0.7
2,614,586	-				-0.3
2,614,586	-				-0.5
2,614,586	-				-1.8
2,614,586	-				+1.0
2,614,586	-				-1.6
2,614,586	-				-2.1
2,614,586	-				+0.1
2,614,586	-				+0.4
2,614,911	+		MPMX19_02496	0.44	+0.4
2,614,911	+		MPMX19_02496	0.44	-0.9
2,614,912	-		MPMX19_02496	0.45	-0.7
2,614,938	+		MPMX19_02496	0.50	+0.4
2,614,938	+		MPMX19_02496	0.50	-1.2
2,614,938	+		MPMX19_02496	0.50	-1.4
2,614,938	+		MPMX19_02496	0.50	+0.8
2,614,938	+		MPMX19_02496	0.50	+0.2
2,614,938	+		MPMX19_02496	0.50	-1.8
2,614,938	+		MPMX19_02496	0.50	-0.9
2,614,938	+		MPMX19_02496	0.50	+1.1
2,614,938	+		MPMX19_02496	0.50	+0.4
2,614,938	+		MPMX19_02496	0.50	-0.4
2,614,938	+		MPMX19_02496	0.50	+0.1
2,614,938	+		MPMX19_02496	0.50	-2.1
2,614,938	+		MPMX19_02496	0.50	-1.2
2,614,938	+		MPMX19_02496	0.50	-0.0
2,614,938	+		MPMX19_02496	0.50	-0.5
2,614,938	+		MPMX19_02496	0.50	-2.6
2,614,938	+		MPMX19_02496	0.50	+0.4
2,614,938	+		MPMX19_02496	0.50	-0.6
2,614,938	+		MPMX19_02496	0.50	-2.4
2,614,939	-		MPMX19_02496	0.50	+1.8
2,614,939	-		MPMX19_02496	0.50	-0.2
2,614,939	-		MPMX19_02496	0.50	-2.4
2,614,939	-		MPMX19_02496	0.50	-0.6
2,614,939	-		MPMX19_02496	0.50	-1.1
2,614,939	-		MPMX19_02496	0.50	-1.4
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	-1.1
2,614,939	-		MPMX19_02496	0.50	+1.4
2,614,939	-		MPMX19_02496	0.50	-0.9
2,614,939	-		MPMX19_02496	0.50	-0.2
2,614,939	-		MPMX19_02496	0.50	-0.9
2,614,939	-		MPMX19_02496	0.50	-0.8
2,614,939	-		MPMX19_02496	0.50	+0.8
2,614,939	-		MPMX19_02496	0.50	-1.6
2,614,939	-		MPMX19_02496	0.50	+1.4
2,614,939	-		MPMX19_02496	0.50	+0.4
2,614,939	-		MPMX19_02496	0.50	+0.1
2,614,939	-		MPMX19_02496	0.50	+1.4
2,614,939	-		MPMX19_02496	0.50	-0.2
2,614,939	-		MPMX19_02496	0.50	-1.6
2,614,939	-		MPMX19_02496	0.50	-0.9
2,614,939	-		MPMX19_02496	0.50	+0.8
2,614,939	-		MPMX19_02496	0.50	+1.0
2,614,939	-		MPMX19_02496	0.50	-0.9
2,614,939	-		MPMX19_02496	0.50	-1.4
2,614,939	-		MPMX19_02496	0.50	+0.1
2,614,939	-		MPMX19_02496	0.50	+0.8
2,614,939	-		MPMX19_02496	0.50	-2.2
2,614,939	-		MPMX19_02496	0.50	+0.8
2,614,939	-		MPMX19_02496	0.50	+1.2
2,614,939	-		MPMX19_02496	0.50	-0.3
2,615,233	+				-0.7
2,615,233	+				+0.8
2,615,233	+				-1.1
2,615,233	+				+0.4
2,615,234	-				+2.4
2,615,234	-				+1.2
2,615,234	-				-0.2
2,615,234	-				+0.4
2,615,234	-				-0.2
2,615,234	-				-0.4
2,615,234	-				-1.2
2,615,234	-				+1.1
2,615,234	-				-0.6
2,615,290	+				-0.6