Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02286

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,406,028	+		MPMX19_02285	0.58	-0.4
2,406,028	+		MPMX19_02285	0.58	-0.4
2,406,028	+		MPMX19_02285	0.58	+0.1
2,406,028	+		MPMX19_02285	0.58	-0.9
2,406,028	+		MPMX19_02285	0.58	+0.4
2,406,028	+		MPMX19_02285	0.58	-1.2
2,406,028	+		MPMX19_02285	0.58	-0.6
2,406,028	+		MPMX19_02285	0.58	-0.2
2,406,028	+		MPMX19_02285	0.58	-0.8
2,406,028	+		MPMX19_02285	0.58	+1.1
2,406,029	-		MPMX19_02285	0.58	-3.4
2,406,029	-		MPMX19_02285	0.58	-1.6
2,406,029	-		MPMX19_02285	0.58	-0.4
2,406,029	-		MPMX19_02285	0.58	-2.0
2,406,029	-		MPMX19_02285	0.58	-2.4
2,406,029	-		MPMX19_02285	0.58	-0.6
2,406,029	-		MPMX19_02285	0.58	+0.1
2,406,134	+		MPMX19_02285	0.63	-0.2
2,406,134	+		MPMX19_02285	0.63	-0.2
2,406,134	+		MPMX19_02285	0.63	-1.5
2,406,134	+		MPMX19_02285	0.63	-0.2
2,406,135	-		MPMX19_02285	0.63	-0.1
2,406,135	-		MPMX19_02285	0.63	-0.9
2,406,135	-		MPMX19_02285	0.63	+0.4
2,406,135	-		MPMX19_02285	0.63	-1.4
2,406,135	-		MPMX19_02285	0.63	+1.4
2,406,135	-		MPMX19_02285	0.63	-0.2
2,406,413	+		MPMX19_02285	0.74	+0.2
2,406,413	+		MPMX19_02285	0.74	-0.4
2,406,413	+		MPMX19_02285	0.74	+0.1
2,406,413	+		MPMX19_02285	0.74	-0.2
2,406,413	+		MPMX19_02285	0.74	-0.6
2,406,413	+		MPMX19_02285	0.74	-1.0
2,406,413	+		MPMX19_02285	0.74	-0.4
2,406,413	+		MPMX19_02285	0.74	-0.2
2,406,413	+		MPMX19_02285	0.74	-1.9
2,406,413	+		MPMX19_02285	0.74	-0.2
2,406,413	+		MPMX19_02285	0.74	+0.7
2,406,414	-		MPMX19_02285	0.74	-0.6
2,406,414	-		MPMX19_02285	0.74	+0.1
2,406,414	-		MPMX19_02285	0.74	+0.8
2,406,414	-		MPMX19_02285	0.74	+0.9
2,406,414	-		MPMX19_02285	0.74	+0.7
2,406,454	+		MPMX19_02285	0.76	+0.4
2,406,454	+		MPMX19_02285	0.76	-1.9
2,406,454	+		MPMX19_02285	0.76	-1.0
2,406,455	-		MPMX19_02285	0.76	+0.8
2,406,455	-		MPMX19_02285	0.76	-2.2
2,406,455	-		MPMX19_02285	0.76	+0.4
2,406,455	-		MPMX19_02285	0.76	-0.7
2,406,455	-		MPMX19_02285	0.76	-0.8
2,406,489	+		MPMX19_02285	0.78	+0.1
2,406,490	-		MPMX19_02285	0.78	-1.6
2,406,674	-		MPMX19_02285	0.85	-0.9
2,406,674	-		MPMX19_02285	0.85	-1.4
2,406,674	-		MPMX19_02285	0.85	-1.7
2,406,674	-		MPMX19_02285	0.85	-0.2
2,406,674	-		MPMX19_02285	0.85	-0.6
2,406,674	-		MPMX19_02285	0.85	-1.4
2,406,713	+		MPMX19_02285	0.87	+2.0
2,406,713	+		MPMX19_02285	0.87	+0.7
2,406,713	+		MPMX19_02285	0.87	+0.4
2,406,713	+		MPMX19_02285	0.87	-2.7
2,406,713	+		MPMX19_02285	0.87	-0.0
2,406,713	+		MPMX19_02285	0.87	-1.4
2,406,713	+		MPMX19_02285	0.87	-0.6
2,406,713	+		MPMX19_02285	0.87	+0.4
2,406,713	+		MPMX19_02285	0.87	+1.7
2,406,713	+		MPMX19_02285	0.87	-1.8
2,406,714	-		MPMX19_02285	0.87	+0.1
2,406,714	-		MPMX19_02285	0.87	+1.4
2,406,714	-		MPMX19_02285	0.87	-1.9
2,406,714	-		MPMX19_02285	0.87	+0.9
2,406,714	-		MPMX19_02285	0.87	-0.4
2,406,714	-		MPMX19_02285	0.87	+1.3
2,406,722	+		MPMX19_02285	0.87	-0.3
2,406,722	+		MPMX19_02285	0.87	-1.1
2,406,722	+		MPMX19_02285	0.87	+0.4
2,406,722	+		MPMX19_02285	0.87	-0.7
2,406,722	+		MPMX19_02285	0.87	-3.9
2,406,722	+		MPMX19_02285	0.87	-1.6
2,406,722	+		MPMX19_02285	0.87	-1.9
2,406,722	+		MPMX19_02285	0.87	+0.3
2,406,722	+		MPMX19_02285	0.87	+0.1
2,406,722	+		MPMX19_02285	0.87	-1.3
2,406,722	+		MPMX19_02285	0.87	+0.1
2,406,722	+		MPMX19_02285	0.87	-0.2
2,406,722	+		MPMX19_02285	0.87	-0.3
2,406,723	-		MPMX19_02285	0.87	+0.8
2,406,723	-		MPMX19_02285	0.87	+0.1
2,406,723	-		MPMX19_02285	0.87	-1.3
2,406,723	-		MPMX19_02285	0.87	-1.0
2,406,723	-		MPMX19_02285	0.87	-0.9
2,406,723	-		MPMX19_02285	0.87	-0.9
2,406,723	-		MPMX19_02285	0.87	+0.4
2,406,723	-		MPMX19_02285	0.87	-1.2
2,406,723	-		MPMX19_02285	0.87	-1.4
2,406,931	+				-0.7
2,406,931	+				-0.2
2,406,931	+				-1.7
2,406,931	+				+0.7
2,406,931	+				-0.4
2,406,931	+				+0.4
2,406,932	-				-0.6
2,406,932	-				-0.6
2,406,932	-				+0.4
2,406,932	-				-0.4
2,406,932	-				-0.2
2,406,932	-				-1.9
2,406,939	+				-0.6
2,406,939	+				-0.9
2,406,940	-				+1.4
2,406,940	-				-0.6
2,406,940	-				+1.4
2,406,940	-				-0.6
2,406,940	-				-0.2
2,406,963	+				-1.2
2,406,986	+				+1.4
2,406,986	+				+1.2
2,406,986	+				+0.0
2,406,987	-				-0.9
2,406,987	-				-1.2
2,406,987	-				-2.1
2,406,987	-				-1.4
2,407,092	+		MPMX19_02286	0.15	-0.9
2,407,092	+		MPMX19_02286	0.15	+0.8
2,407,092	+		MPMX19_02286	0.15	-1.2
2,407,092	+		MPMX19_02286	0.15	-1.2
2,407,092	+		MPMX19_02286	0.15	-1.0
2,407,092	+		MPMX19_02286	0.15	-0.6
2,407,092	+		MPMX19_02286	0.15	-1.4
2,407,092	+		MPMX19_02286	0.15	-0.9
2,407,092	+		MPMX19_02286	0.15	-0.6
2,407,092	+		MPMX19_02286	0.15	-1.0
2,407,093	-		MPMX19_02286	0.15	-1.2
2,407,093	-		MPMX19_02286	0.15	+0.9
2,407,093	-		MPMX19_02286	0.15	-0.4
2,407,093	-		MPMX19_02286	0.15	-1.6
2,407,093	-		MPMX19_02286	0.15	+0.6
2,407,093	-		MPMX19_02286	0.15	+0.8
2,407,300	+		MPMX19_02286	0.59	-2.9
2,407,301	-		MPMX19_02286	0.59	+0.4
2,407,301	-		MPMX19_02286	0.59	-0.6
2,407,447	+				-0.6
2,407,447	+				-0.2
2,407,447	+				-2.5
2,407,447	+				+0.2
2,407,447	+				-1.4
2,407,447	+				+0.2
2,407,447	+				-0.6
2,407,447	+				-0.9
2,407,448	-				+0.4
2,407,448	-				+1.0
2,407,448	-				+0.4
2,407,448	-				-0.3
2,407,464	+				-0.2
2,407,464	+				-1.0
2,407,464	+				-1.4
2,407,464	+				+0.8
2,407,465	-				+0.4
2,407,493	+				-1.4
2,407,493	+				-0.9
2,407,493	+				-0.9
2,407,493	+				-2.7
2,407,493	+				-0.2
2,407,493	+				-0.4
2,407,493	+				+0.4
2,407,493	+				-0.7
2,407,493	+				+0.1
2,407,494	-				+0.8
2,407,494	-				+0.8
2,407,494	-				-1.1
2,407,494	-				-0.6
2,407,494	-				+0.1
2,407,494	-				+0.9
2,407,494	-				+0.1
2,407,494	-				-1.7
2,407,494	-				-0.2
2,407,494	-				-0.9
2,407,494	-				-0.2
2,407,494	-				+0.2
2,407,494	-				-1.7
2,407,494	-				+1.4
2,407,494	-				+0.3
2,407,494	-				-1.7
2,407,494	-				-0.4
2,407,532	+				-1.3
2,407,533	-				-0.6
2,407,846	+		MPMX19_02287	0.68	-0.5
2,407,846	+		MPMX19_02287	0.68	-1.0
2,407,846	+		MPMX19_02287	0.68	+0.3
2,407,846	+		MPMX19_02287	0.68	-0.7
2,407,846	+		MPMX19_02287	0.68	-0.6
2,407,846	+		MPMX19_02287	0.68	-0.5
2,407,846	+		MPMX19_02287	0.68	+0.3
2,407,846	+		MPMX19_02287	0.68	+1.4
2,407,846	+		MPMX19_02287	0.68	-1.8
2,407,846	+		MPMX19_02287	0.68	-0.9
2,407,846	+		MPMX19_02287	0.68	+0.2
2,407,846	+		MPMX19_02287	0.68	-0.9
2,407,847	-		MPMX19_02287	0.69	-0.2
2,407,847	-		MPMX19_02287	0.69	-0.6
2,407,847	-		MPMX19_02287	0.69	-1.2
2,407,847	-		MPMX19_02287	0.69	+0.0
2,407,847	-		MPMX19_02287	0.69	-0.9
2,407,847	-		MPMX19_02287	0.69	+1.0
2,407,847	-		MPMX19_02287	0.69	-0.2
2,407,847	-		MPMX19_02287	0.69	+1.4
2,407,847	-		MPMX19_02287	0.69	-0.7
2,407,870	-		MPMX19_02287	0.74	-0.7
2,407,870	-		MPMX19_02287	0.74	+0.8
2,407,870	-		MPMX19_02287	0.74	-0.9
2,407,898	+		MPMX19_02287	0.80	-0.7
2,407,898	+		MPMX19_02287	0.80	+0.4
2,407,898	+		MPMX19_02287	0.80	+0.8
2,407,898	+		MPMX19_02287	0.80	-0.6
2,407,898	+		MPMX19_02287	0.80	+0.8
2,407,898	+		MPMX19_02287	0.80	-1.0
2,407,898	+		MPMX19_02287	0.80	-3.2
2,407,898	+		MPMX19_02287	0.80	-0.7
2,407,898	+		MPMX19_02287	0.80	+0.1
2,407,898	+		MPMX19_02287	0.80	-0.7
2,407,898	+		MPMX19_02287	0.80	-0.5
2,407,898	+		MPMX19_02287	0.80	+2.0
2,407,899	-		MPMX19_02287	0.80	+0.0
2,407,899	-		MPMX19_02287	0.80	-0.3
2,407,899	-		MPMX19_02287	0.80	+0.1
2,407,899	-		MPMX19_02287	0.80	-0.8
2,407,973	+				+0.9
2,407,973	+				-1.4
2,408,070	+				-0.6
2,408,070	+				-0.9
2,408,070	+				-2.3
2,408,070	+				+0.4
2,408,070	+				-0.2
2,408,071	-				+0.6
2,408,071	-				-1.7
2,408,071	-				-0.6
2,408,071	-				+0.8
2,408,071	-				-0.7
2,408,071	-				-0.5
2,408,071	-				+0.1
2,408,071	-				-0.7
2,408,158	+				+0.8
2,408,158	+				-0.9
2,408,158	+				+0.3
2,408,158	+				-1.2
2,408,158	+				+0.4
2,408,158	+				-0.6
2,408,158	+				-0.4
2,408,158	+				-0.6
2,408,158	+				-1.4
2,408,158	+				-1.4
2,408,158	+				-1.2
2,408,158	+				-0.2
2,408,158	+				-1.5
2,408,159	-				-0.6
2,408,159	-				-2.6
2,408,159	-				-0.3
2,408,159	-				-1.2
2,408,159	-				-0.2
2,408,159	-				+0.4
2,408,159	-				-0.5
2,408,390	+		MPMX19_02288	0.20	-0.9
2,408,452	+		MPMX19_02288	0.23	-0.9
2,408,452	+		MPMX19_02288	0.23	-1.0
2,408,452	+		MPMX19_02288	0.23	+0.8
2,408,452	+		MPMX19_02288	0.23	+1.2
2,408,452	+		MPMX19_02288	0.23	-1.4
2,408,452	+		MPMX19_02288	0.23	-1.4
2,408,452	+		MPMX19_02288	0.23	-0.2
2,408,452	+		MPMX19_02288	0.23	-0.2
2,408,452	+		MPMX19_02288	0.23	-0.2
2,408,452	+		MPMX19_02288	0.23	+0.4
2,408,453	-		MPMX19_02288	0.23	-0.6
2,408,453	-		MPMX19_02288	0.23	+0.1
2,408,453	-		MPMX19_02288	0.23	+1.0
2,408,453	-		MPMX19_02288	0.23	-1.4
2,408,453	-		MPMX19_02288	0.23	-1.7
2,408,453	-		MPMX19_02288	0.23	-0.2
2,408,453	-		MPMX19_02288	0.23	-0.9
2,408,453	-		MPMX19_02288	0.23	-1.5
2,408,453	-		MPMX19_02288	0.23	+0.0
2,408,453	-		MPMX19_02288	0.23	+0.8
2,408,453	-		MPMX19_02288	0.23	-0.5
2,408,453	-		MPMX19_02288	0.23	-0.4
2,408,488	+		MPMX19_02288	0.25	+1.7
2,408,488	+		MPMX19_02288	0.25	-0.3
2,408,489	-		MPMX19_02288	0.25	-0.4
2,408,489	-		MPMX19_02288	0.25	+0.4
2,408,489	-		MPMX19_02288	0.25	-0.9
2,408,489	-		MPMX19_02288	0.25	-0.7
2,408,489	-		MPMX19_02288	0.25	-0.6